Chloroflexus aurantiacus: Caur_2722
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Entry
Caur_2722 CDS
T00639
Name
(GenBank) YmdA/YtgF protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cau
Chloroflexus aurantiacus
Pathway
cau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Caur_2722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cau03019
]
Caur_2722
Messenger RNA biogenesis [BR:
cau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Caur_2722
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_NusA_2nd
KH_KhpA-B
GT2_TM_C
Motif
Other DBs
NCBI-ProteinID:
ABY35927
UniProt:
A9WJM3
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All DBs
Position
3641181..3642713
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AA seq
510 aa
AA seq
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MTELLWAVVALLAGLAGGAGIGVYWANNGVSSLVQRKAAEARLLIEEARSQQKEILLQAK
DEALRIRNEAEAELRESRQSLQKQEERLQRKEENIDRKLEGIERRERLIQQRERQIEQLT
QEAERLKRQQAQELERISQLSREEARSIILAEVERETREDAARRIRELEQQTKEEADKIA
RKIIGLAIQRCASDYVAEMTVSTVNLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTP
EAVTLSCHDPVRREVARVALLKLLKDGRIHPSRIEEVVHKTQLEIEQIMREEGERVAYEA
NVQGLHPDLIKLLGRLKYRTSYGQNVLQHSLECALLAAHMAAELGANVNIAKTAALLHDI
GKAVDHEVQGPHALIGAEIARRLGRSAAIVHAIAAHHYDEEPQTVEAFLVIAADAISGAR
PGARRETLDLYIKRLEALETVATSFPGVQRAFAVQAGREVRVMVQPDQIDDLASIHLARN
VAKKIEESLQYPGQIKVTIIRETRAVDYAR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtgacagagctactctgggccgtcgtcgccctgctggcagggctggctggcggtgcaggc
ataggtgtctattgggcgaacaatggcgtcagctcactggtccaacgtaaagctgccgaa
gcccgcctgttaattgaagaggcgcgttcgcagcaaaaagaaatcctcttgcaagcaaaa
gatgaagcgttacggattcgaaacgaagctgaagccgagttacgtgaatcgcgccagagc
ttgcaaaaacaggaagaacgtctgcaacgtaaagaggaaaatatcgatcgtaaattagaa
gggatcgagcgtcgtgagcggctgatccagcagcgcgagcgtcagattgaacagttgacg
caagaagctgaacggttaaagcgccaacaggcgcaagagctagagcgaatttcgcagtta
tcgcgtgaagaagcgcgctcaattattctggccgaagttgagcgtgaaacacgtgaagat
gcagcccggcgcatccgtgaactcgaacagcaaacgaaagaggaggccgataaaattgcc
cgtaaaattatcggtctggccattcagcgctgcgcgagtgattacgttgcagaaatgacc
gtctcaacggtgaacctgccgagtgaagaactgaaagggcgcatcattggtcgtgaagga
cgcaatattcgcgccttcgagcagatcaccggtgttgatattattgttgatgatacccct
gaagcggtgactctctcgtgccacgatccggtacgtcgggaagtagcacgagtggcgctg
ttgaagttgttgaaggatggccggatccatccttcccgtatcgaggaggtggttcacaag
acacaactcgagatcgagcagattatgcgcgaagaaggtgagcgtgtcgcttacgaagcg
aatgtgcaggggttgcaccccgatctgattaagctgctcggtcgtttgaaatatcgcacc
agttatgggcaaaatgttttgcaacattcgctagaatgtgccttactggcagcccatatg
gctgctgaattgggtgccaatgtcaatattgccaagaccgctgcgttgttgcacgacatc
ggtaaagcggttgatcacgaggttcagggtccgcacgctctgattggtgccgaaattgcc
cggcgtcttgggcggtcggcggcaatcgtgcacgccatcgcagcacatcactacgatgaa
gaaccgcaaaccgtcgaagcctttcttgtgattgccgctgatgcaatttctggtgcccgt
cctggtgcacgtcgcgaaacgcttgatctgtacatcaagcggctggaggctctcgaaacc
gttgctacatcattccccggcgtccagcgtgcgtttgctgtgcaggccggtcgtgaggtg
cgggtgatggtgcaacccgatcaaattgacgatctggccagtatccatctggctcgcaat
gtggctaagaagatcgaagagagtctgcaatatcctggtcagatcaaagtgacgattatc
cgcgaaacccgcgccgttgattatgcacggtga
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