KEGG   Chloroflexus aurantiacus: Caur_2722
Entry
Caur_2722         CDS       T00639                                 
Name
(GenBank) YmdA/YtgF protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
cau  Chloroflexus aurantiacus
Pathway
cau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Caur_2722
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cau03019]
    Caur_2722
Messenger RNA biogenesis [BR:cau03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Caur_2722
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_NusA_2nd KH_KhpA-B GT2_TM_C
Other DBs
NCBI-ProteinID: ABY35927
UniProt: A9WJM3
LinkDB
Position
3641181..3642713
AA seq 510 aa
MTELLWAVVALLAGLAGGAGIGVYWANNGVSSLVQRKAAEARLLIEEARSQQKEILLQAK
DEALRIRNEAEAELRESRQSLQKQEERLQRKEENIDRKLEGIERRERLIQQRERQIEQLT
QEAERLKRQQAQELERISQLSREEARSIILAEVERETREDAARRIRELEQQTKEEADKIA
RKIIGLAIQRCASDYVAEMTVSTVNLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTP
EAVTLSCHDPVRREVARVALLKLLKDGRIHPSRIEEVVHKTQLEIEQIMREEGERVAYEA
NVQGLHPDLIKLLGRLKYRTSYGQNVLQHSLECALLAAHMAAELGANVNIAKTAALLHDI
GKAVDHEVQGPHALIGAEIARRLGRSAAIVHAIAAHHYDEEPQTVEAFLVIAADAISGAR
PGARRETLDLYIKRLEALETVATSFPGVQRAFAVQAGREVRVMVQPDQIDDLASIHLARN
VAKKIEESLQYPGQIKVTIIRETRAVDYAR
NT seq 1533 nt   +upstreamnt  +downstreamnt
gtgacagagctactctgggccgtcgtcgccctgctggcagggctggctggcggtgcaggc
ataggtgtctattgggcgaacaatggcgtcagctcactggtccaacgtaaagctgccgaa
gcccgcctgttaattgaagaggcgcgttcgcagcaaaaagaaatcctcttgcaagcaaaa
gatgaagcgttacggattcgaaacgaagctgaagccgagttacgtgaatcgcgccagagc
ttgcaaaaacaggaagaacgtctgcaacgtaaagaggaaaatatcgatcgtaaattagaa
gggatcgagcgtcgtgagcggctgatccagcagcgcgagcgtcagattgaacagttgacg
caagaagctgaacggttaaagcgccaacaggcgcaagagctagagcgaatttcgcagtta
tcgcgtgaagaagcgcgctcaattattctggccgaagttgagcgtgaaacacgtgaagat
gcagcccggcgcatccgtgaactcgaacagcaaacgaaagaggaggccgataaaattgcc
cgtaaaattatcggtctggccattcagcgctgcgcgagtgattacgttgcagaaatgacc
gtctcaacggtgaacctgccgagtgaagaactgaaagggcgcatcattggtcgtgaagga
cgcaatattcgcgccttcgagcagatcaccggtgttgatattattgttgatgatacccct
gaagcggtgactctctcgtgccacgatccggtacgtcgggaagtagcacgagtggcgctg
ttgaagttgttgaaggatggccggatccatccttcccgtatcgaggaggtggttcacaag
acacaactcgagatcgagcagattatgcgcgaagaaggtgagcgtgtcgcttacgaagcg
aatgtgcaggggttgcaccccgatctgattaagctgctcggtcgtttgaaatatcgcacc
agttatgggcaaaatgttttgcaacattcgctagaatgtgccttactggcagcccatatg
gctgctgaattgggtgccaatgtcaatattgccaagaccgctgcgttgttgcacgacatc
ggtaaagcggttgatcacgaggttcagggtccgcacgctctgattggtgccgaaattgcc
cggcgtcttgggcggtcggcggcaatcgtgcacgccatcgcagcacatcactacgatgaa
gaaccgcaaaccgtcgaagcctttcttgtgattgccgctgatgcaatttctggtgcccgt
cctggtgcacgtcgcgaaacgcttgatctgtacatcaagcggctggaggctctcgaaacc
gttgctacatcattccccggcgtccagcgtgcgtttgctgtgcaggccggtcgtgaggtg
cgggtgatggtgcaacccgatcaaattgacgatctggccagtatccatctggctcgcaat
gtggctaagaagatcgaagagagtctgcaatatcctggtcagatcaaagtgacgattatc
cgcgaaacccgcgccgttgattatgcacggtga

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