Carassius auratus (goldfish): 113043220
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Entry
113043220 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
113043220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113043220
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113043220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Baculo_PEP_C
NPV_P10
Motif
Other DBs
NCBI-GeneID:
113043220
NCBI-ProteinID:
XP_026058241
UniProt:
A0A6P6JDJ9
LinkDB
All DBs
Position
25:10062381..10081146
Genome browser
AA seq
1577 aa
AA seq
DB search
MFNWVVKVVPHPPDTQEDLREEAITANGKTSNRDKFSSAKTGREEDQSSQTSKDSVQSGM
LNWISNGFVSALPQPAGSPLLTRANPDAKSLQDEGSMDRAGVIGWISQGIGKVVPQPDEK
YIQDQTLESEVTEVYETKELPDQEPLAHIPVVELVSEDESEVEPAAQFPPNVMTWIKSGF
QNAIPQHVTRPPNSSSSTPRSSQCSNKVYSPPPESITSVTEIESKTSPSMVGWIVQGLGL
SMPQAVLKNKEGCLEAGKIVQNGSARSAPADLVLQEIDSEDEAQEETCSATNSLPNSQPQ
SQPQTPWSPEQSLPLSVTTPSQAHIELEDAETQTARWTPLIENIRREAEDTAILIMEERW
IQERLVMARMAEEVARQTAEMAVRELAQARFGIQTIAEEPEDVDQELQVLHEEESDIEVI
RNQIAECQVPSVKEFLPEGQEAEAVDTSFTVQTPVEEFKSSSPLLEEPGPESEPEPEPEE
LQEKEEPRDSGEEEEEEEPEPITQQPQSITSTSVSRTDSQVESTAPEEESSVPSRCDVLK
RCFMRVPYAPQALDNFNQFLKDIDVTLPKVPSMPNLPPALSQITQQLPSLPPQLAQLPQQ
ISQRFSKITPQFPNQTLFSAPHFPSFPVQLSSLPHQLSNIPQQISNLPQKVSSLSQRLTS
RPRFSILPQKVSNIPQQLSSIPKKISDIPQKITSIPQKISNIPQCAQQCYSNIQSRLNKL
KPEQDAQGATAKSRDLELDRLVHQSPLHSPRTPSPSSPSSVLDLPNVPSYPRLPPITPSR
QLSGVYNPAFHIEDDPTSARPSVSSRLSVHPAVNVEDVDSDRGKGGRRSRPIPPIINPQD
PNLKTLTVPGARKANRTSVCRDRKQQTIWTKIKRLYSQDDEEEEELETAVRAWPSQSSIS
SADDGLNQRPSSSASQTSTVVNERLQELVKLFKERTERVKEKLIDPDNSDDETPPASPAK
QAPAPPPPPPEPPAEQKSEQEVPEASDEKEEEKTKVLCCKVKPQSKIGRLLQYRFPSSID
PFTNLIYVLWLFCVSLAFNWNAWMIPVRWAFPYQTPENIHVWLLIDYLCDSIYILDILAF
QPRLQFVRHGDLVTGKKEMRDNYIKAVRFKLDVVSLLPLELLYFKTGINPLLRLPRIMKF
MSFFEFNKRLEAILTNAYVYRVIRTTTYLLYAVHCNACLYYWGSSYQGLGFSDWTYDGTG
NSYFRCYYFAVKTLLTIGGLPGPTTLFEIVFQLINYFIGVFVFSIMIGQMRDVVGAATAA
QTNYRACVDNTVKYMASYRIPKDVQNRVKTWYSYTWQSQGMLDEQELLDQLPDKMRLDIA
VDVSYNIISKVPLFQGCDRQMIFDMLKRLRSVVYLPGDYVCKKDEVGREMYIIKAGEVQV
VGGPDGKTVFVTLKAGAVFGEVSLLAVGGVNRRTANVVARGFANLLILTKRDLNEILVHY
PESQKLLRKKARKMVMKDKKPAEKKEEEKELIPIIPPRAETPKLLKAALEMTEKTGMKGT
WSKLKDRSNRSSVSLQHSISSSAAPNSPVHEVHSDQDADTLSQISDSSMQIPTTPTSAGD
RNAFTEEGPAEEEIEKK
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaggtcgtgccacatcctcccgatacacaagaggatctgagg
gaggaagcaatcactgcgaatggaaaaacatcgaatcgagacaagttcagttcagccaaa
acaggcagggaggaagaccagtcatctcaaacctcaaaggacagtgttcagagtggtatg
ttgaactggatctccaacggtttcgtaagcgcactgccccaacctgcagggagtcctctt
cttacgagagccaaccctgatgctaaatcacttcaggatgaaggttctatggacagggct
ggagtcattggctggatctcacaaggaattggaaaggtggtcccgcagcccgatgagaaa
tacatacaggaccagactctagaatctgaagtcacagaggtttatgagacaaaggaactt
ccagatcaggagcctttggcacatataccagtagtagagctggtgtcagaagacgagtcg
gaggtggaaccagctgctcagttccctcctaatgtaatgacctggataaagagcggcttc
cagaacgctataccgcaacatgtgaccagacccccaaattccagttcttccaccccgagg
tcatcacagtgctcaaacaaagtttattcacctcctccagagtcgataaccagcgtgacg
gagatcgagtcaaaaacatcccccagtatggtaggctggattgttcagggtcttggtctt
tcaatgccacaagcggtgcttaaaaacaaagaaggatgtctggaggccgggaagattgtg
caaaatggcagtgctcggtcagctcctgcagaccttgttcttcaggagattgactctgaa
gatgaggctcaagaagaaacatgttcagcaacaaactcactgccaaattcacaacctcag
tcccaaccacaaacaccttggtcaccggaacaatctcttccactgagtgtcaccacacct
tcacaagcacacatagaactggaggacgcagagacccaaactgcacgatggacacccttg
atcgagaacatcaggagagaggcagaggacaccgccatattaattatggaggaacggtgg
atacaggagcgtctggtgatggctcgaatggcagaagaggtggcacggcagacagcagag
atggctgtcagggagttggcacaggcccggtttggtattcaaaccattgcagaagagcca
gaagacgttgatcaagaattacaagtgctgcacgaagaggaaagtgatatagaagtcata
cgaaatcaaattgcagagtgtcaagtaccttcagttaaggagtttcttcctgaaggacaa
gaggcagaggctgtagacacttcgttcacagttcaaacccctgtggaggagttcaagtcc
tcttcacctctactggaggaaccagggcctgaatctgaacctgagccagagcctgaggag
cttcaagagaaggaggagcccagggactccggtgaagaagaagaagaagaagaacctgag
ccgatcactcagcaacctcagtccatcaccagcacctctgtctcaagaactgattcacag
gtggagagtacagctcctgaagaggaaagcagtgtcccctccagatgtgatgtgctgaag
agatgtttcatgcgtgtaccatatgcgccacaggcccttgacaacttcaaccagttcctg
aaagacattgacgtcactttgcccaaagtgccttccatgcccaatctgccccctgctctc
tctcaaatcacccaacagctgccgtcactccctcctcaactggcacagctaccgcagcaa
atttcccagcgattctccaaaatcaccccacagttcccaaaccagacgctttttagtgct
cctcattttcccagcttccccgtgcagttatccagcctcccacaccagctgtccaacatt
ccgcaacaaatttcaaacctcccgcaaaaggtatccagcctttcacaaagactgaccagc
cgtccacggttttccatccttccacaaaaggtctccaacattccgcaacaactctccagc
attccaaaaaaaatatccgacattccacaaaagataaccagcattccacagaagatatcc
aacattccacagtgtgcccagcagtgctactctaacattcagagccgtctcaacaaactt
aaaccggagcaggatgcccaaggagcaaccgcaaagagtagggatctggagttggaccgt
ctcgtccaccagtccccactgcattccccccgtaccccttcaccctcttccccaagctcc
gtcctagacttacccaatgtaccctcttacccccgtctgccacccatcaccccttccagg
cagttgtcaggtgtctacaaccctgccttccacattgaggatgaccccacctctgctaga
ccctcagtgagctccagactgagtgtgcacccggccgtgaatgtcgaagatgttgactca
gaccgagggaaaggaggaagacgatctcgccccataccaccaataataaacccacaggac
cctaacctcaaaaccctcaccgtccctggtgcccgtaaagccaatcggaccagtgtatgc
agagacagaaaacaacagacaatttggaccaagatcaaaagactttactcacaagatgat
gaggaagaagaggagttagaaactgcagtccgggcctggccaagccagagtagcatctca
agtgcagatgatgggctaaatcagcggccatcctcttcagccagccaaactagtactgta
gtaaatgagaggttacaggagctggtcaagctgttcaaagagagaaccgagcgagtcaaa
gagaagctgattgatccagataactcggatgatgaaacaccacctgcctccccagctaag
caagctccagctcctcctcctcctcctcctgaacctccagcagagcagaaatcagagcag
gaggtacccgaggcctctgacgagaaagaagaggagaaaacaaaggtcctgtgctgtaaa
gtgaaacctcagtctaagattggtcggcttctgcagtaccgttttccatccagcatcgac
cccttcaccaatctgatctacgtactatggctgttttgcgtgtctttggcgtttaactgg
aacgcatggatgattcctgtacgttgggcatttccatatcaaacaccagaaaacatccat
gtttggctgttgattgactacttatgtgattccatttacatactggacatcctggccttt
caacccagactacagtttgtgcgtcatggagaccttgtgaccggcaagaaagagatgaga
gataattacatcaaagctgtgcgattcaagctggatgtggtcagtctacttcctctggag
ctcctttacttcaaaacagggattaatccacttcttcgattacccaggattatgaagttc
atgtctttctttgagttcaacaagcgtctggaagctatactgaccaacgcttacgtttac
agagttattcgaaccaccacctacttgctgtatgccgtccactgcaatgcatgtctgtac
tactggggctcttcatatcaaggtctgggtttctcagattggacctatgatgggacaggc
aatagttattttcgctgctactactttgctgtgaagactttgctgaccattggtggtctg
ccaggacccacaacactttttgagattgtgtttcagctcatcaattactttattggagtg
tttgtgttctccatcatgattggtcagatgagagacgttgttggtgcagcgactgcggct
cagacaaactatcgtgcctgtgtggataacacggtgaagtacatggcctcctaccgcatc
cctaaagatgtgcagaacagagtgaaaacctggtacagctacacgtggcagtcccaaggc
atgctggatgaacaagagctattagatcaactacctgacaagatgaggctggatatagca
gtggacgtcagctacaacattataagtaaagtgccactattccagggctgtgatagacag
atgatctttgacatgctgaagaggctcagatcagtagtgtaccttccaggagactatgtc
tgcaagaaggatgaagtgggtcgtgagatgtacattataaaggcaggggaagtccaggta
gttggtggtcccgatggaaagacagtgtttgtgaccctgaaagcaggagctgtgtttgga
gaggtcagcttgcttgctgtgggtggagtaaaccggcggacagctaatgttgtggcgcgt
ggttttgctaacctcctcatcttgaccaaaagggacctgaatgagatcctggtgcactat
ccagagtcccagaaactactgcgcaagaaagccaggaaaatggtgatgaaggataaaaag
cctgctgaaaagaaagaggaagaaaaggagctcattccgattattcctcctcgagccgag
acgcctaaactgttaaaagctgcgctggagatgacagagaaaacaggaatgaaaggaaca
tggtccaaacttaaggacaggagcaacagatcaagtgtctccttgcagcactccatctct
tcctctgcggcgcccaactctccagtccatgaagtgcactcagatcaagacgcagatact
ctgtctcagatatcagacagttcaatgcaaattcccacgacccccaccagcgctggagac
aggaatgcatttactgaagagggcccagcagaggaggaaatagaaaagaagtaa
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integrated database retrieval system
