KEGG   Carassius auratus (goldfish): 113048534
Entry
113048534         CDS       T07313                                 
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113048534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caua03400]
    113048534
Enzymes [BR:caua01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     113048534
DNA repair and recombination proteins [BR:caua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     113048534
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-GeneID: 113048534
NCBI-ProteinID: XP_026066188
Ensembl: ENSCARG00000067516
UniProt: A0A6P6K208
LinkDB
Position
29:4731952..4735041
AA seq 310 aa
MPKRAKKNEEAVDGETGNGAEPAKKEKKGKEPEAPILYEDPPDQMTSKDGRAANMKITSW
NVDGLRAWVKKNGLDWVRKEDPDVLCLQETKCAEKSLPSDITDMPEYPHKYWAGSEDKEG
YSGVAMLSKTEPLNVTYGIGKEEHDKEGRVITAEFPSFFLVTAYVPNASRGLVRLDYRKT
WDVDFRAYLSDLDKRKPLVLCGDLNVAHQEIDLKNPKGNRKSAGFTPEEREGFTELLKAG
FTDSFRELYPEQANAYTFWTYMMNSRAKNVGWRLDYFLLSSALLPGLCDSKIRNTAMGSD
HCPITLHLAV
NT seq 933 nt   +upstreamnt  +downstreamnt
atgcctaaaagagccaagaagaatgaggaagctgtggatggggagactggcaatggagca
gaacctgcaaagaaagagaagaaggggaaggagccagaggcaccgattctgtacgaggat
cctcctgatcagatgaccagtaaggatggccgtgcggctaacatgaagatcacctcctgg
aatgtggacggtctgcgtgcatgggtcaaaaagaacggccttgattgggtgcgtaaggag
gatccagatgtgctttgtctgcaggaaacaaagtgtgctgagaaatctctgccatctgat
atcactgacatgcctgagtatccgcacaagtactgggctggatcagaggataaggaaggt
tacagcggagtggccatgctctccaagactgaaccgctcaatgtcacctacggcatcggt
aaagaggaacacgataaagagggccgagttatcactgctgagtttccgtctttcttcctg
gtcacggcgtatgtgcccaacgccagccgtggtctggtgcgtcttgactaccgcaagacg
tgggatgttgatttccgtgcctacctgagcgacttggacaagcgcaagcccctggtgctg
tgtggagatctgaatgtggcccaccaagagatcgatctcaaaaaccccaagggtaaccgc
aagagcgcaggcttcacccctgaggaacgtgagggcttcaccgaacttctcaaggccggt
tttaccgacagttttcgggagctgtatccagaacaagccaatgcctacaccttctggacc
tacatgatgaattcacgagccaaaaacgtcggctggcgtttagactactttttgctgtcc
tctgccttactcccaggtctgtgtgacagcaagatccgaaacacggccatgggaagtgac
cactgtcctattaccctgcatttggccgtttag

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