Carassius auratus (goldfish): 113048534
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Entry
113048534 CDS
T07313
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113048534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caua03400
]
113048534
Enzymes [BR:
caua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
113048534
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
113048534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
113048534
NCBI-ProteinID:
XP_026066188
Ensembl:
ENSCARG00000067516
UniProt:
A0A6P6K208
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All DBs
Position
29:4731952..4735041
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AA seq
310 aa
AA seq
DB search
MPKRAKKNEEAVDGETGNGAEPAKKEKKGKEPEAPILYEDPPDQMTSKDGRAANMKITSW
NVDGLRAWVKKNGLDWVRKEDPDVLCLQETKCAEKSLPSDITDMPEYPHKYWAGSEDKEG
YSGVAMLSKTEPLNVTYGIGKEEHDKEGRVITAEFPSFFLVTAYVPNASRGLVRLDYRKT
WDVDFRAYLSDLDKRKPLVLCGDLNVAHQEIDLKNPKGNRKSAGFTPEEREGFTELLKAG
FTDSFRELYPEQANAYTFWTYMMNSRAKNVGWRLDYFLLSSALLPGLCDSKIRNTAMGSD
HCPITLHLAV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagagccaagaagaatgaggaagctgtggatggggagactggcaatggagca
gaacctgcaaagaaagagaagaaggggaaggagccagaggcaccgattctgtacgaggat
cctcctgatcagatgaccagtaaggatggccgtgcggctaacatgaagatcacctcctgg
aatgtggacggtctgcgtgcatgggtcaaaaagaacggccttgattgggtgcgtaaggag
gatccagatgtgctttgtctgcaggaaacaaagtgtgctgagaaatctctgccatctgat
atcactgacatgcctgagtatccgcacaagtactgggctggatcagaggataaggaaggt
tacagcggagtggccatgctctccaagactgaaccgctcaatgtcacctacggcatcggt
aaagaggaacacgataaagagggccgagttatcactgctgagtttccgtctttcttcctg
gtcacggcgtatgtgcccaacgccagccgtggtctggtgcgtcttgactaccgcaagacg
tgggatgttgatttccgtgcctacctgagcgacttggacaagcgcaagcccctggtgctg
tgtggagatctgaatgtggcccaccaagagatcgatctcaaaaaccccaagggtaaccgc
aagagcgcaggcttcacccctgaggaacgtgagggcttcaccgaacttctcaaggccggt
tttaccgacagttttcgggagctgtatccagaacaagccaatgcctacaccttctggacc
tacatgatgaattcacgagccaaaaacgtcggctggcgtttagactactttttgctgtcc
tctgccttactcccaggtctgtgtgacagcaagatccgaaacacggccatgggaagtgac
cactgtcctattaccctgcatttggccgtttag
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