Carassius auratus (goldfish): 113054097
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Entry
113054097 CDS
T07313
Name
(RefSeq) integrin alpha-1-like
KO
K06480
integrin alpha 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113054097
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113054097
09142 Cell motility
04810 Regulation of actin cytoskeleton
113054097
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113054097
04515 Cell adhesion molecules [BR:
caua04515
]
113054097
04090 CD molecules [BR:
caua04090
]
113054097
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113054097
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin alpha subunits
113054097
CD molecules [BR:
caua04090
]
Proteins
113054097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Clathrin
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
113054097
NCBI-ProteinID:
XP_026075200
Ensembl:
ENSCARG00000028453
UniProt:
A0A6P6KSE0
LinkDB
All DBs
Position
35:complement(4864970..4906986)
Genome browser
AA seq
1182 aa
AA seq
DB search
MLSGIVHLTLAALLALLPQLSCFNVDEKNQMSFSGPVEDMFGYTVQQFENSEGKWVLIGS
PLTGQPSKRTGDVYRCPVGQNKTTGCEKFLLPENTTIPNINEVKENMTMGTTLVVNPDGS
GFLACGPQYGYICGKQQYITGICSNVSSSFKVLNSIAPTVRECKQDMDIVIVLDGSNSIY
PWEHITEFLVKFLQSIEIGPARVGIVSYGDDVSHTFNLSQFTNTKDLLEEAAKIPQKTGH
KTMTALGIDTARKEAFTVERGARPGVKKVMVIVTDGESHDHYNLKHVTDECEKDGIERFA
VAVLGDYNRQNKSINELKKFIKEIESIASDPKSDHFFNVSDERALVTIVDALGSKIFALE
ATSENHTSSFEMEMSQSGFSAHTSKAGVMLGAVGAFDWNGTVVMQSGQEFVVPKKNSFHD
PAVQRYEGMTGYLGYDVQSAHTPHGVLYITGAPRFNHSGRVTVYRFDGENVTITQTLEGE
QIGSYFGSVLQTHDIDRDSYTDILLVGAPMYMGPERNEQGQVYVYKLNESGLFEHEMTLK
PVNQTCCTAHSQSNCKSVSKNEPCGARFGTAIAAVPDLNLDGFNDIVIGSPLENDHRGAV
YIYHGSQKSIKEKYVQRIAAGGDGESMKFFGQSIHGIMDLNDDGIIDVTIGGIGGAALFW
SRDVAELLANMTFDPSKINLQQTCQVQGRTTVCVKTIVCFKYRIKSDKDTKIETVIRYSL
TLDSLRAIARGRFNQTDNRRVQKNESIVHELCREHTFYTSDKLDFRDPIMVTLEFGLVDE
DSGPVLDGELPTSLNKTIALVDCGNDEKCVANLHLKATTNISSLLIKNSQEKFYVSIDIH
NSGDSAYNTKVILSHTENLNYVKVEPKDKDCETNFTRIVCAVGYPFLKTNKKESFRIQFE
PNPSHIRKDIVINVTATSDSEDKDLKDNFVSIVIPVKHEVNLRFSSIKYMKGDHIVLKEK
EKIPSVFNHTSVIGDEVKISYKLERDPEMPSPPLLLTIMFPYQTAVKNFLLYLTDLTHTA
DISCYTSGVINPLGIKPDKPYPVNPKKETLSVYLLSCKENGDHCMSFSCFIPPGDIKHIN
TTFRLWRPTFIKGEFSNIHMTVDAKLESKNPDLFVLNDNIKIREVKIQVTKDVRSGIPLW
IIILSILIGLLILSLVIFALWKAGFFKRKSVEDMKEEMKDSN
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgctttctggaatcgttcatttgacattagcagcgcttctggcgctgctgccacagttg
tcatgtttcaatgtggacgagaagaaccagatgtcattcagtggaccagtggaagacatg
tttggatacaccgtccaacaatttgagaacagtgagggaaagtgggttctgattggttct
cctcttactggacagccgtctaagcggaccggagatgtctacaggtgccctgtgggacaa
aacaaaacgactggatgtgaaaaattcctattgccagaaaacacaacaattcccaacata
aatgaagtgaaggaaaacatgactatggggacgacgctggtggtcaacccagacggcagt
ggctttctggcctgtggtcctcagtatggctacatctgtggaaagcagcagtacatcact
gggatctgctcaaatgtcagctcctccttcaaagtcctcaactccatcgctccgactgta
cgagagtgcaagcaggatatggacattgtcatagtgttggacggatccaacagcatctac
ccctgggaacacatcacagagttcctggtcaaatttctccagagcattgaaattggacca
gcccgggtgggcattgtgtcttacggagacgacgtcagccacaccttcaacctcagccag
ttcactaacacaaaagaccttcttgaggaagctgctaaaatacctcaaaaaaccggccac
aaaaccatgacagctctcggcattgatacagcaaggaaagaggcctttacagtggagcga
ggagcaagaccaggggtcaaaaaagtcatggtgatcgtcacagatggagagtcacatgac
cactacaatttgaaacatgtcaccgatgagtgtgaaaaagatgggattgagcggttcgct
gttgctgtccttggtgactataatcgacagaataaaagcatcaacgaattaaagaagttt
attaaagaaattgaatccattgctagcgatcccaaaagtgatcatttcttcaatgtgtcg
gatgaaagagcattagtgaccatcgtggatgccttaggaagcaagatctttgccttagag
gccacatctgagaaccacacctcctcgtttgagatggaaatgtctcagtcgggattcagc
gctcacacgtctaaagcaggtgtgatgctgggagccgtgggtgcttttgactggaacggg
acggtagtgatgcagtctgggcaagagtttgtcgttcctaaaaaaaacagcttccacgac
cctgcggtgcagagatacgaaggcatgacaggatacctgggttatgacgtgcagtcagcg
cacacaccccacggggtgctgtacatcacaggagcaccacggtttaaccacagcgggcgg
gtcacggtttaccgcttcgatggagaaaatgtcaccataacacagacgctggaaggagag
cagatcggctcctatttcggcagtgttctccagacgcatgacatagaccgtgacagttac
actgacatccttctggtaggagctcccatgtatatgggtccagagaggaatgaacaaggt
caagtctacgtctacaaactcaacgagagcgggctgtttgaacatgagatgacgctgaaa
ccggtgaatcagacctgctgtacggctcactcccagagcaactgtaagagcgtcagtaag
aacgagccctgtggcgcacgcttcggcaccgccatcgctgccgtccccgacctcaacctg
gacgggttcaatgacatagtgatcggatcacctctggagaacgaccacagaggggcagtg
tatatttaccacggctctcagaaatcaataaaggagaagtatgtacagcgcattgctgcc
ggaggagacggagagagtatgaagttcttcggccaatcaattcacggtatcatggatttg
aatgatgacggcatcattgatgtcactatcggaggaataggaggagccgcgcttttctgg
tctcgggatgttgcagagcttcttgccaatatgaccttcgaccctagcaagatcaatctg
caacagacctgtcaggttcaagggaggaccacagtatgtgtgaagaccatagtgtgcttc
aaataccgaatcaagtctgacaaagacacaaagatagaaactgtcatcaggtacagttta
acgctggactcactgagagcgattgcaagaggacggtttaaccaaacggacaacaggaga
gtgcaaaagaacgagtcaattgtgcacgagctttgcagagagcacaccttctacacgtcg
gataagctggatttcagagaccccattatggtcacgctggaattcggtctagtggatgaa
gactcgggtccagtcctagatggggaattaccaacgtcactcaacaagactattgcatta
gtggactgcgggaatgacgagaagtgtgttgctaatctacaccttaaagccactacaaac
atctcaagtcttcttataaaaaacagccaggagaagttttatgtcagcatcgacatccac
aacagcggagacagtgcttacaataccaaggttatattgagccacacagaaaatctcaac
tatgtaaaagttgagcccaaagataaggactgtgaaactaattttaccagaatagtatgt
gcagttggatatcctttccttaaaaccaataaaaaggaaagtttcagaatccagtttgag
cccaatccctctcatattcgtaaggacattgtgataaatgttactgcaactagtgatagt
gaggacaaagatttgaaagacaactttgtgagtatcgtcatccctgtgaagcatgaagtc
aacctgagattctcttcaatcaagtacatgaagggggaccacattgtattaaaagagaag
gagaagatacccagtgtttttaaccacactagtgtgatcggggacgaggtgaaaatcagc
tacaagcttgagagagatcctgaaatgccaagtcctccactgctcctcacgataatgttc
ccatatcaaacagctgtcaaaaactttctgctgtatttgacagatctcacccacacagcg
gacatcagctgttataccagtggagtgattaaccctttaggcatcaagcctgacaagcct
tatccggtgaatcctaaaaaagagaccttgagtgtatatctcttgagttgcaaagaaaat
ggagatcattgcatgtcgtttagctgcttcatcccacctggagacatcaagcacatcaac
accacgttcagattgtggcgacccaccttcatcaaaggagaattttccaacattcacatg
actgttgacgccaagctggagagcaagaacccggacctgtttgtgttaaatgataacatc
aagatcagagaggtgaagattcaagtcaccaaagacgtgcgaagtggaatcccactatgg
ataattatccttagtattcttataggacttttaatactgtcacttgttatcttcgcctta
tggaaggctggattcttcaagagaaaatcagttgaggacatgaaggaagagatgaaggat
tctaattga
DBGET
integrated database retrieval system