Carassius auratus (goldfish): 113061712
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Entry
113061712 CDS
T07313
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
113061712
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113061712
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113061712
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
113061712
NCBI-ProteinID:
XP_026086865
UniProt:
A0A6P6LQQ1
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Position
43:11943162..11978768
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AA seq
1323 aa
AA seq
DB search
MFSWVIKVVPQPPASPGKLGEEDQTNASTAAPASDVTKKEQVKQEPSNPTEEVSEENSSQ
SGVLSWLSHGFSSALPQPVNSSKLANSEVKHEGNAVSSSNTSDQAGMIGWIVQGLGKVVP
QPDEKYKGHTEPEEVTEPAVPVVKVDPPVQDVKDVRDAEPLPHIPVVEVVSDEDPDAANV
PFSPRVIEWIKHGFEKVVPHSPVHLRPPAATEAPAQKAASAPVTPCKQEPAPAPAPTPAP
APPPAPAPAPAPAPAPAAPPVAPPAPASAPAAPEQPKVAEDSKGTNMVGWFVQGFGRIIP
QPVVKPKEGSSDIVQNVCILQDPCDMVLEEVDSDWEAQQREQGSGQDVLAEEQVPQEGSS
LLQVQPNILPHMLSLQEQEDAETQTERWTPLIESIKKEAEETAIANMEERLQQERVEAAR
VAEDLARQAAELAVRQLEEEHTTQIIIDTKTEELDNEEQLPNIQEEENEEDPELQPLGEE
SGEESEDSKNTDADVKRSLMDVCPAEPSPHGESEVSDQALQADPVSPPVTTQPQRATSLP
PDADQEEEPPEEGCGESSHLKPALKVEDVEDGELTIPKIIVPSEFDSMTLAVPVTNLISH
SKAVDSEMQEEMFPGEEDEQDLNKSDLLAVEEGLERPASAASQTSIVVNERLQELVKLFK
DRKDRAKERLVDPDESDDESPSASPAKKPGEAPPPPPPPEEKKDDEEKAEEEVTIYEFMG
YKIPVPQFRMPQIPDWLRVILEYRFPSSIDPFTDLIYVVWLFFVTLAWNWNVWLIPVRCT
FPYQTSENIHWWLLMDYFCDGIYILDIFVMQPRLQFVRGGDIVCDKEAMRDNYRQTERFK
MDVISLFPLDLLYVFTGVKSLLRFPRLLKYNAFFEFNDRLEAVMSKAYIYRVIRTSAYLL
YSLHCNACIFYWGSDYEGLGSTKWVYNGKGNSYIRCYYFAVKTLITIGGLPDPTTVFEIV
FQMLNYFVGVFAFSIMIGQMRDVFGAATAGEAYYRHCVDSTVKYMSSYKIPREVQNRVKI
WYDYTWKSQGMMDEQELLIQLPDKMRLDIAADVNYSIVSKVALFQGCDRQMIFDMLKRLK
SVVYLPGDFVCKKGEIGREMYIIKAGEVQVVGGPDGMTVFVTLRAGSVFGEISLLAGGGG
NRRTANVKAHGFANLFILDKKDLAEILVHYPESQKLLRKKAKKMLTKDKKPADEKGQAKE
TGEVIPQRPETPKLFKAALEVGTGQTFAKLKEAYKGATLEPSSPTSGRTSTAPVPPPSPM
HRRSPIPRPRIPDEDDMVSETTDSTMIIRMTPRVEGEEILSVEVSPGEGMEAKPEDPSKT
TDK
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctgggtgataaaggttgttccccagcctccagcgtctcctgggaaactggga
gaggaggaccagaccaatgcttccactgcagcaccagcgagtgatgtgacgaaaaaagag
caagtaaaacaagaaccttccaatccaacggaggaggtctcagaggaaaacagctctcag
agtggggttttgagttggctctctcatggattcagcagtgctctccctcagccagtaaac
tcctctaaactggccaacagtgaagttaagcatgagggaaatgcagtgagcagcagtaac
acatcagatcaggctggaatgataggctggatcgtgcagggactgggaaaagtggttcca
cagccagatgagaaatataagggtcacacagagccagaggaggtcactgagcctgcagtt
ccagtggttaaagtggatcctccagtgcaagatgtcaaagacgttcgtgatgctgagccg
ctgcctcatattcctgtggtggaggttgtgtctgatgaggacccagacgctgctaatgtg
cccttctctcccagagtaatagaatggattaagcatggttttgagaaggtagttccacat
tctcctgtccatcttcgtcctcccgctgctacagaggcacctgcccaaaaggctgcttct
gctcctgtgactccctgcaaacaagagccagcacctgcacctgcaccaacacctgctcct
gcacctccaccagcacctgcgcctgcacctgcacctgcgccagcaccagcagctccacct
gttgccccacccgcacctgcatctgcacctgcagctccggagcaacctaaagtagctgag
gattccaaaggcacaaatatggttggctggtttgtacaggggttcggacgcatcatacca
caaccagtagtgaaaccaaaagagggcagctctgacatcgttcaaaacgtctgcatcctg
caggacccgtgtgatatggtgctggaggaggtggactcagactgggaagcccagcagagg
gagcagggctcagggcaggacgtcctggctgaggagcaggtgccacaggagggttcatct
ctgctacaagtgcagcccaatatcctgccgcacatgctgtccctgcaggagcaggaggac
gcagagacccagactgagcgctggacacctctcattgagagcatcaagaaggaagcagag
gagactgccatagcaaacatggaggagagacttcagcaggagcgtgtggaagcggctcgt
gtggcggaggatctggcccggcaggctgcagaattggccgtcagacagttggaggaagag
cacaccacacagatcatcatcgacacgaaaaccgaagagctggacaatgaggaacaactg
ccaaatatccaggaggaagagaatgaagaagatccggagttacagccgctcggtgaagag
agtggggaggagagtgaggatagtaagaacacagatgctgatgtgaaaaggagcctgatg
gacgtctgcccggcggagccctcaccacatggtgagtctgaggtttcagatcaggcacta
caagcagatccggtctcgccgcccgtgaccactcagcctcagcgagccacatctttacct
cctgatgctgaccaggaagaggaacctccagaagaaggatgtggagaaagctcccatctg
aagccagcactgaaggtggaggacgtggaggatggagagctgaccattcccaaaatcatc
gtcccctcagagttcgactcaatgacccttgctgttcctgtaacaaatctgatttctcac
agcaaagctgtggattcagaaatgcaggaagagatgtttcctggtgaggaagacgaacaa
gacctgaacaagtctgatctacttgctgtagaagaaggccttgagcgtcctgcatctgca
gccagccagacaagtattgttgtgaatgagcgtctgcaggagctggtcaagctatttaaa
gaccgcaaagaccgtgcaaaagagaggctggttgatccagacgagtctgatgatgaaagc
ccttcggcatctccagccaaaaagcctggtgaagccccacctccaccacctcctccagag
gaaaagaaagacgacgaggagaaggcagaagaggaggtgacaatctatgagtttatggga
tacaagatcccagttccccagttcagaatgccccagattcctgactggctgagagtcata
ctggaataccgtttcccatccagcattgatcccttcacagacttgatctacgtggtgtgg
ctgttctttgtgacactcgcgtggaactggaatgtctggctgatccctgtacgctgcact
tttccgtaccagacgtctgagaacattcactggtggctgctgatggactacttctgtgat
ggcatttatattctggacatcttcgttatgcagcccagactgcagttcgtgagaggaggg
gacattgtgtgtgacaaagaagcaatgagagacaactacaggcaaacagagagattcaag
atggatgtgatcagtctctttccactggatttgctgtatgtcttcacaggcgtcaaatcg
ctcttgaggttccctcgtcttctaaagtacaatgcattctttgagtttaatgatcgtctg
gaagctgtgatgagcaaagcctacatttacagggtgatccggacgagtgcatacctgctg
tactctctgcactgtaacgcctgtattttctattggggttctgactatgaaggactgggt
tccactaaatgggtctataatggcaaaggaaacagttatattcgctgctactactttgct
gtgaagactctgatcaccatcggaggtttgccggaccccaccactgtctttgaaatcgtc
ttccaaatgctcaactacttcgtgggagtctttgctttctccatcatgattggtcagatg
agagacgtctttggagccgccactgcaggtgaggcctattacagacactgtgtggacagc
actgtcaaatacatgagctcctacaagatcccccgcgaggtccagaaccgcgtcaagatc
tggtacgattacacctggaagtcgcaaggcatgatggatgagcaggagttactcatacag
ctgccagataagatgcgtctggacatcgctgcagatgtcaactacagcattgtcagtaaa
gtggcgctctttcagggatgtgacagacagatgatatttgacatgctcaagaggctaaaa
tctgtggtgtaccttccgggagattttgtctgtaaaaaaggtgagatcggacgagagatg
tacatcatcaaagctggagaggtgcaggtggttggaggacctgatgggatgacggtgttt
gtgaccctcagagctggctctgtgtttggggaaattagtttgctggcgggtggtggtggg
aaccgacgaacagctaacgtaaaggcccatggttttgctaacctcttcatcctggataag
aaggacctggcagagatcttagtgcactaccccgagtcccagaagttactgcgcaagaag
gccaagaaaatgctgaccaaagataagaagcctgcagatgagaagggccaggctaaagag
acgggtgaggtcatccctcagcggccggagacacccaaactattcaaggctgcactggag
gttggaacaggacagacttttgccaagctgaaggaggcatataagggagcaactctagag
ccgtcctctcccacctccggcaggacctccacagctccagtcccccctccgtcacccatg
caccgccgttcacccattccccggcctcgcatcccagatgaggatgacatggtatcggag
accaccgacagcaccatgatcatccgcatgactccccgtgtcgagggagaggagatctta
tctgtggaagtcagtcctggagagggcatggaggcgaagccggaagatccaagcaaaact
actgacaagtga
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