Carassius auratus (goldfish): 113062313
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Entry
113062313 CDS
T07313
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C-like isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04010
MAPK signaling pathway
caua04020
Calcium signaling pathway
caua04260
Cardiac muscle contraction
caua04261
Adrenergic signaling in cardiomyocytes
caua04270
Vascular smooth muscle contraction
caua04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113062313
04020 Calcium signaling pathway
113062313
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
113062313
09153 Circulatory system
04260 Cardiac muscle contraction
113062313
04261 Adrenergic signaling in cardiomyocytes
113062313
04270 Vascular smooth muscle contraction
113062313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113062313
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113062313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
113062313
NCBI-ProteinID:
XP_026087861
Ensembl:
ENSCARG00000017044
UniProt:
A0A6P6LWJ9
LinkDB
All DBs
Position
4:complement(21305689..21444747)
Genome browser
AA seq
2315 aa
AA seq
DB search
MLRGLFSRRRLKHERLEEEAEVRFKGKLVSERELGYTFVRPGGSNYSSPSLAPVPSLNED
ERVGGGGGVLGLAPEHIPTPGAPLSWQAAIDAARQAKLMGTTGAPISTACSTQRKRQHYT
KPKKQATTASTRPPRALLCLTLKNPIRRACISIVEWKPFEIIILMTIFANCVALAVYIPF
PEDDSNATNSNLERVEYLFLIIFTVEAFLKVIAYGLLWHPNAYLRNGWNLLDFIIVVVGL
FSAILEQATKGDGGTSMGGKAAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVP
LLHIALLVLFVIIIYAIIGLELFMGKMHRTCFFFKDGHRGTISEEKPAPCAPGTAHGRHC
TPANVTQCMMGWAGPNDGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVY
FVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQA
EDIDPENDDEGLDDDKPRNRKTHRLQYIRGAVKKKAALLRKALSMPASENESVNTDNAPA
GDMEGETCCTRMANRISKSKFSRYSRRWNRLCRRTCRAAVKSNVFYWLVIFLVFLNTLTI
ASEHHQQPEWLTNVQEIANKVMLALFTGEMLLKMYSLGLQAYFVSLFNRFDSFVVCGGIL
ETILVEIKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLF
IIIFSLLGMQLFGGKFNFDETRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPS
FPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARTAS
PEKRQDSEKPPLEDEKKEEKIELKSITSDGETPTATKINIDEYTGEENEEKNPYPVNDFP
AGEEDDEEPEMPVGPRPRPLSDIQLKEKAAPMPEAKAFFIFSSSNKFRVLCHKIVNHNIF
TNLILFFILLSSISLAAEDPVNNDSFRNQILGYADYVFTGIFTIEIILKMTAYGAFLHKG
SFCRNYFNILDLVVVSVSLISSGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCV
FVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKFSYCTDTSKQTQAECRGSYILYKDGNVG
KPEKAQRSWENSEFNFDDVLQGMMALFAVSTFEGWPGLLYRAIDSHTEDVGPVYNYRVII
SIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRY
IPKNPYQYKVWYVVNSTYFEYLMFTLILLNTICLAMQHHGQSQSFSKAMNILNMLFTGLF
TVEMILKLIAFKPRGYFSDPWNVFDFLIVIGSIIDVILSEINHYFVDAWNTFDALIVVGS
VVDIAITEVNPADPSSSTPSSVVRPMVRTNGNQNPISHSTPITLSTRPLTPIIHHVTSGL
QNTEDNARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIY
AVIGMQMFGKIALRDNSQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACAPDRPCEKG
SEVNHNSEHCGSNFAIIYFVSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEF
KRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVM
FNATLFALVRTALRIKTEGVIVSYTQIQFINMHSSNTHPNFYAQKSQCLDVFVSGNLEQA
NEELRAIVKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVA
KIAPKTALSLQAGLRTLHDMGPEIRRAISGDLTVEEELERAMKETVCAASEDDIFRVKRS
GGLFGNHVNYYHQSDGHASFPQSFTTQRPLHISKSGSPGEAESPSHQKLVDATFTPSSYS
SSGSNANINNANNTAIGHRYPKPTVSTVDGNTGPPLTTVPLPRPTWCFPNKSSDSSDSRL
PIIRREEASTDETYDETFLDERDQTMLSMDMLEFQDEESKQLAPMVEADVGEERRPWQSP
RRRAFLCPTALGRRSSFHFECLRKHNRPDVSQKTALPLHLVHHQALAVAGLSPLLRRSHS
PTLFTRLCSTPPASPSGRSGGGPCYQPVPSLRLEGSGSYEKLNSSMPSVNCSSWYSDSNG
NHSRSVQRTQRPVSLTVPPVTRRDSTSLSHGSACSLVEAVLISEGLGRYAQDPSFIQVAK
QELADACDMTMEEMENAADNILNANTPPNANGNLLPFIQCRDTGSQESRCSHVLGLSTAT
GSDELLGAELEFSDGAGQRNSSLMEDEDMECVTSL
NT seq
6948 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgggggctgttcagtcggcgcaggctgaagcacgagcggctggaggaggaagcg
gaggtgcggttcaaagggaagctggtgtcagagagagagctgggctacacgtttgtgcgg
ccaggaggctccaactattccagtccgtcgttggctccagtccccagtctgaatgaggac
gagcgtgtggggggcgggggtggggtgctgggtcttgcacctgaacacattcccacccct
ggcgcccccctcagttggcaggcagccatcgacgcggcacggcaggccaagctgatgggc
accaccggagccccgatctccactgcgtgctccacgcagcgtaaacgccagcactacacc
aaacccaagaaacaggccaccactgcctccacgcgcccaccccgagcccttctctgccta
actcttaaaaaccccatccgcagggcgtgcatcagtattgtggaatggaaaccgtttgaa
atcataattttgatgactatttttgcaaactgtgtggccttagctgtctacatccctttc
cccgaggacgattccaacgcaaccaactcaaacctggaacgggtggagtatctctttctg
atcatttttacggtggaagcatttctgaaagttattgcatacgggctgctgtggcaccct
aatgcgtacctgcggaacggctggaacttgttggatttcatcatcgtggtggttgggctc
ttcagtgcaatattagagcaggccactaaaggggatggtgggacttcaatgggaggcaag
gctgcagggtttgatgtaaaagccctgcgagcctttagagtgttaagacctctgagactt
gtatctggagtacctagtttacaggtggtgctgaactccatcattaaagccatggttccc
ctcctgcacatcgctctgctcgttctgttcgtcatcattatttatgccatcatcggcctc
gagctcttcatgggcaagatgcacagaacctgttttttcttcaaagatggacacagaggt
actatatctgaagagaagccggccccctgcgccccaggcactgcccatggacgccattgc
accccggccaacgtaacacagtgcatgatgggatgggcgggcccaaatgatggaatcacg
aactttgataactttgcatttgccatgctgactgtgtttcaatgcatcacgatggagggc
tggactgacgtcctgtactggatgcaggatgccatgggttatgagcttccgtgggtctat
tttgtcagtctggtcatctttggatcctttttcgttctaaatctggttctgggtgtgttg
agcggagagttctctaaagagcgagaaaaggccaaagctcgcggcgatttccagaagctc
cgtgagaagcagcagctagaggaggatctgaagggctacctggactggatcacgcaggcg
gaggatatcgaccctgagaacgacgacgagggactggacgacgacaagcctagaaatcgg
aagactcatcgtttacagtacatccgtggagcggtgaagaaaaaagcagctctgcttcgt
aaggcgttgagtatgccggccagtgaaaatgagtcagtgaacactgataatgctccagct
ggagacatggagggagagacctgctgtactcgcatggcaaataggatctccaaatccaaa
ttcagtcgatattcacgccgatggaatcggttatgtcggcgcacgtgccgtgcagcagtg
aagtcaaatgtgttctactggctggtgattttcctggtatttttgaacacacttaccatt
gcctctgagcaccaccagcaaccagaatggctcaccaatgtgcaagaaatcgccaataag
gtgatgctggctctttttactggtgagatgctgctgaagatgtacagcctgggcctacag
gcctatttcgtctccctttttaaccgcttcgacagttttgtggtgtgcggtggaattctg
gagactatcctggtggaaataaagatcatgtcacccctcggcatctctgtgctgcgctgt
gtgcgtctgctccgcatcttcaagatcaccaggtactggaactctctcagtaatctggtg
gcatctctgctgaactcggtgcgctctatcgcgtccctgcttctgctgctcttcctgttc
atcatcatcttcagtctgctcggaatgcagctctttggtggcaagttcaactttgacgag
acgcgccgcagcaccttcgacaacttcccccagtctctcctcaccgtctttcagattttg
accggagaggactggaactctgtgatgtacgatgggatcatggcgtacggtggaccctcc
tttcctggcatgctcgtctgcatttatttcatcatcctcttcatctgcggaaactacatc
ctcctgaatgtcttcttggccattgctgtggacaacctggcagacgcagagagtctgaca
tcagcgcagaaagaggaagaggaggagaaagagaggaagaagctggctagaacggccagt
ccagagaagcgtcaggactctgagaaaccacctctggaggatgaaaagaaagaggaaaag
attgaactaaaatccatcacttctgatggagagacgccaactgccactaagatcaacatc
gatgagtacacaggggaggagaatgaggagaagaatccatatcctgtgaacgatttccca
gcaggagaggaggacgatgaggagccagagatgccagtaggtcctcgtccacgtccgctc
tccgacattcagctgaaggagaaagctgcccccatgccagaagccaaagctttctttatt
ttcagctcctctaacaagttcagggttttgtgtcataagattgtaaaccataacatcttc
accaatttaatcctgttctttatactgctgagcagtatttcactggcagcggaggaccca
gtgaataatgactcattcaggaatcagattctaggctatgcagattatgtgtttacagga
atcttcaccatagagatcatattaaagatgacagcgtatggagcgttcctacataagggt
tcattttgtcggaattattttaatattttggatctggtggtggtcagtgtgtctctgatc
tcctctggaattcagtcaagtgccattaatgtagtgaagattctcagagtgctgagggtg
ttgaggcccctgagagcaatcaacagagccaagggcctcaaacatgtggtccagtgtgtg
tttgtagccatccgtaccatcgggaacatcgtcatcgtcaccactttgctgcagttcatg
tttgcctgtattggtgttcagcttttcaagggcaaattctcctactgcacagacacctct
aaacagacacaggccgaatgccgggggtcctatatattatacaaagacgggaatgttggg
aagccagagaaagcacagcgttcatgggagaacagtgaattcaactttgatgatgtcctg
cagggcatgatggctctgtttgccgtgtccacttttgagggctggccagggctcctctac
agagccatcgactcccataccgaggatgttggcccagtctacaactaccgtgtgatcatc
tctatattcttcatcatctacatcatcatcatcgccttcttcatgatgaacatattcgta
ggtttcgtcattgtgacatttcaggagcagggagagcaagagtacaaaaactgtgagctg
gacaagaaccagcgtcagtgtgtggaatatgccctgaaggcccgtcccctgcgcaggtac
atccccaagaacccgtatcagtacaaggtgtggtacgtggtcaactccacctactttgag
tacctgatgttcaccctcatccttctcaacaccatctgcctggccatgcagcatcatggc
caatctcagtccttcagcaaagccatgaatatcctcaatatgttgttcaccggcctcttc
actgtggaaatgatcctcaaactcatcgccttcaaacccaggggttactttagtgacccc
tggaatgtttttgacttcctcatcgtaattggcagcattatagacgtcattctgagtgag
atcaaccattattttgttgatgcatggaacacgtttgatgcccttattgtagtgggtagt
gttgttgatatagccatcacagaggttaacccagctgacccctcctcctctaccccctcc
tctgtggtaagaccaatggtacggaccaacggtaaccaaaaccccatctctcattccacc
cccatcaccttgtcgacccgtccattgacacctatcattcaccatgtgacttcgggcctc
caaaacactgaagataacgccaggatttcaatcacgttctttcggctgttccgtgtgatg
aggctggtgaagcttctgtctcggggagagggcattcggacgctgctctggaccttcatt
aaatcctttcaggctcttccctatgttgctttgctgatcgtaatgctgttcttcatctac
gccgtcattgggatgcagatgtttggtaagattgccctgagggacaacagccagatcaac
cgaaacaacaacttccagacgtttcctcaggctgttctgctgctcttcaggtgtgcaacg
ggggaggcatggcaggaaatcatgctggcctgtgccccggaccgcccgtgtgagaagggg
tcagaggtcaaccacaacagtgaacactgtggcagcaactttgccatcatctactttgtt
agcttttatatgctttgcgccttcctgatcattaacctcttcgtggccgtcatcatggac
aactttgactatttaacacgtgattggtcgatattggggccacatcacctagatgagttt
aagcggatatgggcagaatacgatcctgaggccaagggtcggataaagcacctggatgtg
gtgacattactgcgcaggattcagcctccccttggatttggaaagctttgtccacacaga
gtggcatgcaagcggcttgtgtccatgaacatgcctctcaatagtgacgggacggtgatg
ttcaacgcaactctctttgctctagtaagaacggctctacgcatcaaaactgaaggtgtg
atagtgtcatacacgcaaatacaattcataaacatgcattcatctaatacacaccccaac
ttctatgcacagaaaagtcaatgtttggatgtgtttgtgtcaggtaacctggagcaagca
aatgaggaactcagagccatcgtgaagaagatctggaagaggacgagcatgaagctgttg
gatcaagttgttccccctgctggagatgatgaagtaaccgttgggaagttctatgccaca
ttcctgattcaggaatacttcaggaaatttaagaagcgcaaggaacagggcctggtggcc
aaaattgccccaaagactgctctttcactgcaggctggcctgcgtacactgcatgatatg
ggtcctgagatcagaagagcgatatcaggagatctgactgtggaggaggagctagagaga
gcaatgaaggaaaccgtgtgtgctgcttctgaggatgatatcttcagggtaaagcggtct
ggcggcctcttcggtaaccacgtcaactactaccaccagagtgatggccacgcctccttc
ccacagtccttcacaacacagcggccgttgcacatcagtaaatccgggagtcccggcgag
gcagaatctccatctcatcagaagctcgtcgacgccaccttcactccgagcagttactct
tcctcaggatccaacgcaaacatcaacaacgccaacaacacagccatcggacaccggtac
cccaaacctaccgtcagcacagtggatggaaacacggggccacccctcaccactgtccca
ctaccacggcccacatggtgctttcctaacaagagctctgattccagtgacagtcgtctc
cctataatacggcgagaggaagcatctacagatgagacgtacgatgaaacatttctagac
gagagagatcagaccatgctctcaatggacatgctggaatttcaggatgaagagagcaag
caactggctccaatggtggaggcagatgtaggggaagagaggaggccgtggcagtctcca
cgaagacgggcgtttctctgccccactgcactgggtcgacggtcttcctttcacttcgag
tgtctcagaaaacataacagacctgatgtttctcagaaaacagcactaccattgcaccta
gtgcatcatcaggctttggctgtggcagggttgagtcccctgctgagacggagtcattct
ccgacgctgttcacgcgtctgtgctccacacctcctgcgagtcccagcggccgcagcggg
ggcgggccgtgctaccagcccgttccgtccctgcggttagagggcagcggatcttatgag
aaactcaacagcagcatgccgtctgtgaactgcagctcgtggtacagtgacagtaatggc
aaccacagcaggagtgtgcagaggacgcagcgacccgtgtccctcacagttcctccggtc
acacgcagagactccacatccctgtcacacgggagcgcctgcagcctcgtggaggccgtg
ttgatatccgagggtttgggtcgctatgcacaggatccctccttcatccaggtagcgaag
caggaactagcggacgcctgcgacatgaccatggaggagatggagaacgctgctgacaac
attctcaacgccaacacaccgcccaacgccaacggaaacctgctacccttcatacagtgc
agagacactggctcgcaggagtcccgttgcagccatgtgctgggcctctcgaccgccacg
ggctctgacgagctgctgggggcggagctagagttctccgacggggcaggccagcggaac
agctctctgatggaggacgaggacatggagtgcgtgaccagtttgtag
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integrated database retrieval system
