Carassius auratus (goldfish): 113066616
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Entry
113066616 CDS
T07313
Name
(RefSeq) integrin alpha-11-like
KO
K06587
integrin alpha 11
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04810
Regulation of actin cytoskeleton
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113066616
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113066616
09142 Cell motility
04820 Cytoskeleton in muscle cells
113066616
04810 Regulation of actin cytoskeleton
113066616
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113066616
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin alpha subunits
113066616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
FG-GAP_3
FG-GAP_2
VWA_3
Motif
Other DBs
NCBI-GeneID:
113066616
NCBI-ProteinID:
XP_026094338
Ensembl:
ENSCARG00000039535
UniProt:
A0A6P6MCV0
LinkDB
All DBs
Position
50:2045670..2091722
Genome browser
AA seq
1186 aa
AA seq
DB search
MEYTNIFLLWIAALMPGQRTCFNIDTRHAQIIEGSKEAQFGYTVQQHEADGGKWLLVGAP
FESSGEHQTGDVYRCLLDSKPATNCTRLHLGKISLNNVSERKEKMRMGMTLTSNPKDNSF
VACGPLWSYECGSSYYSTGICSRVNSSFSFTHSIAPAFQRCETYMDIVIVLDGSNSIYPW
FEVQDFLINVLQKFYVGPGQIQVGVVQYGARVVHEFRLDDFRTVEEVVEAAKNIDQRGGE
ETRTALAINEARTQAFKHGGRPEAKKVMIVITDGESHDSPNLRRAVEDSEKDNITLYAIA
VLGSYNRRGINPEAFLREIKFIATDPEEHFFSVTDESALKDIVDALGEKIFSLEGTNQNG
TAFGLQMSQAGFSSHVVEDGILVGAVGAYDWNGAVLKETRHGRVIPAKSSYLKEFPEELK
NHGAYLGYMVSSVVSAQHGQLYVAGAPRFNHTGKIIIFTLTNSGNFTILYSLYGQQIGSY
YGSELAPIDLNNDGLTDLLLVGAPMYFYKGWEKGRVYIYTLSLQGYYIPDGTLGPSEKTY
DSRFGAAMSALPDLNGDGFTELVVGAPLEDDHKGAIYLFYGKQDSIQPKYKQRIAAGDVS
PGLRYFGRSVHGMMDVNGDELIDLSVGSLGAVVLLWSRSVVRVGISVHFEPSKINVFNKD
CTRGGREVSCMLATVCLNVTARTPMTDPKTVALRYSFGLEESRYFPRAVLDSTEEPQPRD
ITLQPDSDYCQRVYFHVHEVTDYTRPLTFTVNIGLQSTDEGPVLDDSWPTSLQSELPFWN
GCDDDDECVPSLVLQSSSDLLDHRQFCERRERSSWPPCVHQRTRTSGERLVEASRRKVLV
ETRLENQGENAYGTVLHITHSPNLQFSSLLLKAPSDITIACPNSDDTSLYRSCNVSAPFL
RSHAQVYFRLEFEFNRSIFLNYVQITLKVSSEGEELSPEDNVNDIYHNLKYEADILFTRD
SSPSRFELKPGLDQSLPVGTGPPFNISYQIQNLGVFPVSELLFTLNVFAVTRNANTLLRL
SDLEIDQTAGSSCALPRVITVDSSSQEDLSLNTLTNTSTEDTLLAHCRISLAPQADVSIT
ATGSLNLHTLFAVKLKRLDLIMTASVEMNPSSPMFLHEERPMRHIILEIRKEEDYRIPVW
VIIGSTLGGLQLLALLVLALWKLGFFHRQKRKREEQATNEKTAEDQ
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggagtacacaaacatctttctgctgtggatcgccgctctgatgccagggcagcggacc
tgctttaatattgacaccagacatgcacaaataattgaggggtcgaaggaggctcagttt
ggatatactgttcaacaacacgaggcagacggggggaaatggctcctggtcggagctccc
tttgagagcagcggtgaacaccagacaggtgacgtctacagatgtctactagacagcaaa
cctgctacaaactgcacacgactgcatttaggaaagatatccctgaacaatgtgtctgaa
cgcaaagagaaaatgaggatgggaatgactctcacctccaaccccaaagacaacagcttt
gtggcgtgcgggccactgtggtcgtacgagtgtggaagctcctactacagcacaggcatc
tgttcaagagtcaacagcagcttcagcttcacccacagcatcgctccagcctttcagaga
tgcgagacctacatggacatagtgattgtgttagatggatccaactccatctacccctgg
tttgaggttcaagatttcctgataaatgtgctgcagaagttttacgtcggtccaggacag
atacaggtaggggtggtccagtatggtgcgagagtggtgcacgagtttcggctggatgat
ttccgtacggttgaggaggttgtcgaggcagcgaagaacatcgaccagcgaggcggagaa
gaaacacggacagctctcgccatcaatgaggctcgaactcaagcattcaaacacggaggt
cgtccggaggctaagaaagtcatgattgtcatcactgatggagaatcgcacgacagccca
aacctacggagagccgtggaggacagtgagaaggataatatcaccttgtacgccattgcg
gttcttggctcctataaccggcgagggatcaatcctgaagctttcctgagggaaatcaag
ttcatcgccactgatcccgaggagcacttcttcagcgtcaccgacgagtcggccttgaag
gatatcgtggatgctctaggagagaagatcttcagcttggagggcaccaaccagaacggc
acggcctttggtttgcagatgtctcaagctggattctcttcacatgtcgtggaggatggg
atactggttggtgccgtcggggcgtatgattggaacggagctgttcttaaggaaacccgt
catggtagagtcatcccagccaagtcctcttacctcaaagagttcccagaggaactgaag
aaccacggagcgtatctggggtacatggtgtcatcggtggtctcggctcaacacggtcag
ctgtacgtcgctggagcccctcggtttaaccacacggggaagatcatcatcttcacactg
accaacagcggcaacttcaccatactgtactcgctctacggacagcagatcggctcatat
tatggaagtgagctggcacccattgatctgaacaacgatggattgacggatcttttactt
gtcggcgctcccatgtacttctacaaagggtgggagaaaggccgagtttacatctacacc
ctcagcttacagggctattatatcccagacgggactcttggaccatcagagaagacctac
gattctcggtttggcgcagctatgtccgctcttccggacttgaatggtgacggcttcact
gagctcgtcgtaggtgcaccactggaggacgatcacaaaggagccatctatctcttctac
ggaaaacaagacagcatccaacccaaatacaaacagagaatagccgctggtgacgtctct
ccaggtctgcgttattttggccgcagtgttcatgggatgatggatgtgaatggagatgag
ctcatagatctgtccgtgggctctttaggggccgtggttctgctttggtctcgcagtgtc
gtccgcgtggggatcagcgttcattttgagccttcaaaaatcaatgtttttaataaagac
tgcactcgaggaggtcgagaggtgtcgtgtatgttggccaccgtttgtctgaacgtcacg
gcgcggacaccgatgaccgatccaaagacagtcgcgctgaggtacagttttggtctcgag
gagagcagatatttccccagagccgtgttggacagcactgaagagccgcagcccagagac
atcaccctgcagccggactcagattactgccagcgagtctacttccacgttcatgaagtg
accgactacacacgacccctgacctttactgttaacatcggcctgcagagcacagatgaa
ggaccggtgctggacgacagctggcccaccagtctacagtcagagcttccgttctggaac
ggttgtgatgatgacgatgagtgtgttcccagcctggtccttcagagcagctctgatctg
ttagaccacaggcagttctgtgagcgacgtgagcgctcctcgtggcccccgtgtgtccac
cagaggacgaggacgagcggagagcgcttggtggaggccagtcggaggaaagtcctggtg
gagacgcgtttggagaaccagggagagaacgcatacggcacggtcctgcacatcacacac
tctccaaacctccagttctccagtctgctgctgaaggcaccttcagacattacgatcgcg
tgcccgaactctgatgatacgagtctctaccgaagctgcaacgtcagcgcgccgttcctg
aggtcacacgctcaggtgtattttcgactggagtttgagttcaacagatctatcttcttg
aactacgtccagatcacgctgaaggtctccagtgaaggtgaagaattgtctccagaggac
aacgtcaatgacatttatcataatctgaaatatgaggctgatattctcttcacaagagat
tccagcccgtcccgttttgagctcaaacctgggcttgaccagagcctccctgttgggacc
ggaccacccttcaacatctcttatcagatccaaaacctcggcgtgtttcccgtctctgag
cttctcttcacgttaaacgtcttcgctgtgaccagaaacgcaaacacactcctgcgcctc
tcagacttggagatcgatcagacggctggctcgagctgcgctcttccacgagtcattacc
gttgactcgtcctcgcaggaagatctctccctcaacacgctcacgaacacgtccaccgaa
gacacgttattagcgcactgtagaatcagtctggctccccaagcagacgttagcatcacc
gccacaggatcgctcaatctacacactttatttgctgtgaaactgaagcgcttagatctg
ataatgactgcttcagttgagatgaacccctcgagtccgatgttcctccacgaggagcga
cccatgagacatataatcctggagatcaggaaggaggaagattaccggattcccgtctgg
gtgattatcgggagcacactgggaggactacagcttctggccctgctggttctggctctc
tggaagctgggattcttccacaggcaaaagagaaagagggaagagcaggcgaccaatgag
aagacagcagaggatcagtaa
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integrated database retrieval system