Carassius auratus (goldfish): 113066731
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Entry
113066731 CDS
T07313
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
113066731
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113066731
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113066731
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Cauli_AT
Ion_trans_2
DUF2894
Motif
Other DBs
NCBI-GeneID:
113066731
NCBI-ProteinID:
XP_026094508
Ensembl:
ENSCARG00000069677
UniProt:
A0A6P6MDC8
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Position
50:complement(5188384..5199197)
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AA seq
845 aa
AA seq
DB search
MAKEQLQETRDLELNRLVHQSPLHSPCIPSPSSPSSVLDLPNVPSYPRLPPITPSKQLSG
VSNPVFHIEDDPTSARPSVSSRLRVHPAVNVEDVDSDRGKVGRRSHPIAPIINPQDPNLK
TLTVPGARKANRTRERKPQTVWTKIKRLYSQDDEEEEKLETAVQVLRNQSTISSADDGLN
QRASSSASQTGTVVNERLQELVKLFKERTERVKEKLTDPDNSDDETPPDSPAKQAPAPPP
EPPAEQTTEQEESEAPGEKEEEKTKLLWCKVKPQSRTSRLLQYRFPSSIDPFTNLIYVLW
LFCVSLAFNWNAWMIPVRWAFPYQTPDNIHVWLLIDYLCDAIYILDILTFQPRLQFVLHG
DIVTSKKEMRNNYIKAVRFKLDVVSLLPLELFYFKTGINPLLRLPRILKFMSFFEFNKRL
ESILTNAYVYRVIRTTTYLLYAVHCNACLYYWGSSFEGLGFSEWTYDGKGNNYFRCYYFA
VKTLLTIGGLPEPTTLFEIVFQLINYFIGVFVFSIMIGQMRDVVGAATAAQTNYRACVDN
TVKYMASYRIPKDVQNRVKTWYSYTWQSQGMLDEQELLDQLPDKMRLDIAVDVSYNIISK
VPLFQGCDRQMIFDMLKSLKSVVYLPGDYVCKKDEVGREMYIIKAGEVQVVGGPDGKTVF
VTLKAGAVFGEVSLLAVGGGNRRTANVVARGFANLLILTKRDLNEIMVHYPQSQKLLCKK
AKKMLMKDKKPAEKKEEEKEPIPIIPPPAETPKLLKAALELTEKSGMKGTWSKLKGRTNR
SSVSSQHSISSSAAPDSPVHEPHSDQDADTLSQISDSSLQIPTTPTSAGDGNVFAEEGSV
EEETK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggagcaattgcaggagactagggatttggagttgaaccgtcttgttcaccag
tccccactccattccccttgtatcccttcaccctcttccccaagctctgtcctagacctg
cccaatgtgccctcttacccccgtcttccacccatcaccccttccaagcagttgtcaggc
gtctccaaccctgtcttccacattgaggatgaccccacctctgctagaccctcagtgagc
tccagactgagggtgcacccagccgtgaatgtggaagatgtcgactccgaccgagggaaa
gtaggaagaagatctcatcccatagcaccaataataaacccacaggaccccaacctcaaa
accctcactgtccctggtgcccgtaaagctaatcggacaagagagagaaaaccacagaca
gtttggaccaagatcaagagactttactcacaagatgatgaggaagaggagaagttagaa
actgcagtccaagtcttgcgaaaccagagtaccatctcaagtgcagatgatgggctaaat
caacgagcatcctcttcagccagccaaactggtactgtagtaaatgagaggttacaggag
ctggtcaagctgttcaaagagagaacagagcgagttaaagagaagctgactgatccagat
aactctgatgatgaaacaccacccgactccccagctaagcaagctccagctcctcctcct
gaacctcctgcagagcagacaacagagcaggaggaatctgaagcccctggtgagaaagaa
gaggagaaaacaaagctcctgtggtgtaaagtgaaacctcaatccaggactagtcggctt
ctgcagtaccgttttccatccagcatcgaccccttcactaatctgatctacgtactctgg
ctgttttgcgtgtctttggcgtttaactggaacgcgtggatgattcctgtgcgttgggca
tttccatatcaaacaccagataacatccatgtgtggctgttgattgattacttatgtgat
gccatctatatactggacatcctgacctttcaacccagactgcagtttgtgcttcatgga
gacattgtgaccagcaagaaagagatgagaaataattacattaaagctgtacgattcaag
ctggatgtggtcagtctgcttcctctggagcttttttacttcaaaacagggattaatcca
cttctccgcttgcccaggatcctgaagtttatgtctttctttgagtttaacaagcgtctg
gaatctatactgaccaacgcttacgtttacagagttattcgaaccaccacctacctactg
tatgcggtccactgcaatgcctgtctgtactactggggctcttcatttgaaggtctgggt
ttctcagaatggacctatgatgggaaaggcaataattattttcgctgctactactttgct
gtgaagactttgcttaccattggtggcctgccagaacccacaacactttttgagattgtg
tttcagctcatcaattactttattggagtgtttgtgttctccatcatgattggtcagatg
agagatgttgttggtgcagcgactgcggctcagacaaactatcgtgcctgtgtggataac
acagtgaagtacatggcttcctaccgcatccctaaagatgtgcagaacagagtgaaaacc
tggtacagctacacctggcagtcccaaggcatgctggatgaacaagaactgctagatcaa
ctacctgacaagatgaggctggatatagcagtggacgtcagctacaacattattagtaaa
gtgccactcttccagggctgtgatagacagatgatctttgacatgctgaagagtctcaaa
tcagtggtgtaccttccaggagactatgtctgcaagaaggatgaagtgggccgtgagatg
tacatcataaaggcaggggaagtccaggtagtcggtggtcctgatggaaagacagttttt
gtgaccctgaaagcaggagctgtgtttggagaggtcagcttgcttgctgtgggcggagga
aaccggcggacagctaatgtcgtagcacgtggttttgctaaccttcttatcttgaccaaa
agggacctgaatgaaatcatggtgcactatccacagtcccagaaactgctgtgcaagaaa
gcaaagaaaatgttgatgaaggataaaaagcctgctgagaagaaagaggaagaaaaggag
cccatcccgatcattcctcctcctgccgagacgcccaaactgttaaaagcagcgctagag
ctgacagagaaatccggaatgaaagggacatggtccaaacttaagggtaggaccaacaga
tcgagtgtctcctcgcagcactccatctcttcttctgcagcacctgactcaccagtccat
gaaccgcactcagatcaagacgcagatactctgtctcagatatcagacagctcactgcaa
atccccacgacccccaccagcgctggagacgggaatgtatttgctgaagagggttcggtg
gaggaggaaactaaatag
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