Carassius auratus (goldfish): 113072058
Help
Entry
113072058 CDS
T07313
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113072058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113072058
03110 Chaperones and folding catalysts [BR:
caua03110
]
113072058
04121 Ubiquitin system [BR:
caua04121
]
113072058
Enzymes [BR:
caua01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
113072058
Spliceosome [BR:
caua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113072058
Complex C
U4/U6.U5 tri-SnRNP related factors
113072058
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
113072058
Chaperones and folding catalysts [BR:
caua03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
113072058
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
U-box type E3
113072058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
U-box
eIF3_N
Motif
Other DBs
NCBI-GeneID:
113072058
NCBI-ProteinID:
XP_026100992
Ensembl:
ENSCARG00000016537
UniProt:
A0A6P6MWM5
LinkDB
All DBs
Position
5:complement(5384586..5414738)
Genome browser
AA seq
524 aa
AA seq
DB search
MGKRQHQKDKMYITCTEYTQFYGGKKSEIPRANFRRLPFDHCSLSLQPFEYPMCTVDGVV
FDLMSIVPWIKKFGTNPITGEKLEAKSLIKLNFSKNNEGKYHCPVLYTVFTNNSHVVTNK
VTGNVFSYEAVEQLNIKTKSYKDLLTDEPFTRQDLITLQDPTNLDKFNVSDFFHVKNNLK
VLDPDEEKAKQSPSYHLKTTNLETRETLAELYRDYKGDELLASTMKEPEAKKTDKLNAAH
YSTGRVSASFTSTAMAPATTHEADAISDDAVRFQYVKKKGYVRLHTNKGDVNVELHCDKV
PKAGENFIKLCKKGYYDGTIFHRSIRNFMIQGGDPTGTGTGGESYWGKPFKDEFRPNLSH
TGRGILSMANSGPNTNKSQFFITFRSCTYLDRKHTVFGRVVGGLETLQAMENVESNPKTD
KPKSEIKLLSATVFVDPYEEADAQIAAEREKEAQKQEEERAQTSASVNRAKTEDKPKTFR
PGVGKYINTAATKHSRPDGEKPSTSEAPAKRPKGRTGFGDFSSW
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaggcagcatcaaaaagataagatgtacatcacatgtacagaatacactcag
ttctatggagggaagaaatcagaaatcccacgagccaatttcagacgtctgccctttgat
cactgcagtttgtctcttcagccctttgagtatcccatgtgcacagtggatggggtggtt
tttgacctaatgagcattgtgccttggattaagaagtttggtaccaaccccataacagga
gagaagcttgaggctaaatccctcatcaagcttaatttcagcaaaaacaatgaagggaag
taccattgtcctgtgctctacacagtgttcacaaacaactcccacgttgttaccaacaaa
gtcacaggaaatgttttctcttatgaggcagtggaacagctcaacatcaagacaaagagt
tataaagacctgttgaccgatgaaccttttactcgccaggatctcatcacactacaggat
cctaccaatctggataaattcaatgtctctgacttcttccatgtgaaaaacaatttgaaa
gtccttgaccctgatgaggagaaagccaagcagagcccatcataccatctgaaaaccaca
aacctggagacgcgtgaaacccttgcagagctctacagggactataaaggagatgagctg
ttggcctccactatgaaagagccagaagccaaaaaaacagacaagctcaatgctgctcac
tattccactggaagagtgtctgcctcctttacatctacagctatggctccagccaccacc
catgaagcagatgctatttctgatgatgctgtccgcttccagtatgttaagaagaaaggc
tatgtccgcctgcacacaaacaaaggagacgtgaatgtggagttgcactgcgataaggtc
cccaaggctggagaaaactttattaaactgtgtaagaaaggatattatgatggcacaata
ttccaccgctctattagaaatttcatgattcaaggaggagaccctacagggactggtaca
ggaggagagtcttactgggggaagccattcaaggacgagttcaggcccaatctgtctcac
acgggtcgtggtattctgagcatggctaactcaggacccaacactaataaatcccagttc
tttataacatttcgctcatgcacatacctggacagaaagcacactgtgtttggaagagtg
gttggtggtttggagaccctccaagcgatggagaatgttgaaagcaatccaaagacagac
aaacccaagtctgagataaagctgctgagtgctacagtatttgtggacccgtatgaggaa
gccgatgcacagattgcagccgagcgagaaaaggaagcacagaaacaggaggaagagaga
gcgcaaacttctgcttcagtcaacagggcaaaaacagaggacaagcctaaaaccttcaga
ccaggagtgggcaaatacatcaacaccgctgccacgaaacattcccgcccagatggtgaa
aaaccctccacaagtgaagctcctgccaagagacccaaaggcagaacaggttttggagac
ttcagttcctggtag
DBGET
integrated database retrieval system
