Carassius auratus (goldfish): 113092594
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Entry
113092594 CDS
T07313
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113092594
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
113092594
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
RhlB
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
113092594
NCBI-ProteinID:
XP_026114031
Ensembl:
ENSCARG00000010628
UniProt:
A0A6P6NZ69
LinkDB
All DBs
Position
6:complement(6099830..6135240)
Genome browser
AA seq
1993 aa
AA seq
DB search
MAAQLLVPPGPDSFRPFLPESLAAIESRIAEEAAKRPKGERRPDDDDENGPKPNSDLEAG
KSLPFIYGDLPSEFVSVPLEDLDTYYSNQKTFIVLNRGKAIFRFNATPALYILSPFNPLR
RISIKVLVHSMFSFVIMCTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGF
CVGKFTFLRDPWNWLDFSVIMMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVKIPDFNFTENLTATLNYSTA
INWTEYISDESNYYFLPGRRDPLLCGNSSDAGQCPEGFSCIKAGRNPDYGYTSFDTFSWA
FLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLILAVVAMAYDEQNQ
ATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYSGRGGLSEESSSGGSRLSSK
SAKERRNRRKKRKQREEEEKANQEKFHKSASEDSIRRPGFRFSIDANRLSYEKKCSTPNQ
SLLSIRGSLFSPRRNSRASLFSFRGRARDFGSENDFADDEHSTFEDSDSRRGSLFVPRCV
ERRSSTVSHCSLAPRIMLPANGKMHCTVDCNGVVSLVGGTSVPTSPIGRLLPEGTTTESE
ARKKRSGSHQPSDYLDETVARKRALSVASILTNTMEELEESRQKCPPCWYKFANSFLIWD
CCPAWLKVKEIMNMVVMDPFVDLAITICIVLNTLFMAMEHYPMTERFNHVLSVGNLVFTG
IFTAEMCLKLIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKL
AKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRECVCKISADCVL
PRWHMDDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLA
LLLSSFSADNLAATDDDSEMNNLQIAVGRIQKGIALVKSTLRQFLQSLCLAVSKPRALDE
EKPLDDLHSNGKENCLSNHAPVAVDLTKDYLKEGCVSPGNGVEGHVKYGIEEGDYMSFIH
NPSLTVTVPIAVGESDFENLNTEDFSSDSSDVEGSKEKLPVDAVLSSSEGSTVDIRPPGE
GAESVELEPEESLDPEACFTEGCVIRFQCCKVDVETGKGKSWWILRKTCFIIVEHNWFES
FIIFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYVFILEMLLKWVAYGFVKYFTN
AWCWLDFLIVDVSLVSLVANALGYSELTAIKSLRTLRALRPLRALSRFEGMRVVVNALLG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNITNDEMFPISVVNNRSDCFALIAN
NDSARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDLEQQPDYESNLYMYLY
FVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKP
IPRPANVFQGLIFDFITKQAFDIVIMILICLNMVTMMVETDDQTKDMDNILYWINLVFII
LFTGECVLKMISLRHYYFTVGWNVFDFVVVILSIVGMFLSDMIEKYFVSPTLFRVIRLAR
IGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKHEAGID
DMFNFETFGNSMLCLFQITTSAGWDGLLAPILNKQDPDCDSELEHPGSMYRGDCGNPSVG
IFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWERFDPDATQF
VEYEKLSEFADALDPPLRIPKPNKIQLIAMDLPMVSGDRIHCLDILFAFTLRVLGEEGEM
DALRGQMEDRFMASNPSKVSYEPITTTLRRKQEEMSAIVIQRAFRRYRIRQTVKKASEAY
RQQLQDGSGCIPEKEVLVIEKFQENSASEKTDMTPSSASPPSYNSVAKSEKDKYEKERRE
KEYKAKDARDRKK
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcagctgctcgttccacccggacctgacagcttccggcccttcttgcccgag
tctctcgctgctatcgagagccgcatcgcagaggaggcggcaaaacggcccaaaggcgag
agacggcctgatgatgatgatgaaaatgggcccaaacccaacagcgatttggaagcagga
aaatccctgccctttatctacggagaccttccatccgaatttgtgtccgtcccgctggag
gacctggacacctactacagcaaccaaaaaacctttatagtattgaatcgtgggaaggct
atattccgctttaatgctacaccggctttgtatattttgagccccttcaatccactgagg
agaatctccatcaaggtcctggtgcattcaatgttcagttttgtgatcatgtgcacaatc
ttgaccaactgcgccttcatgaccctcagcaatccccctgactgggccaagaatgtggag
tacacgttcacagggatctacaccttcgagtccctgattaagatcctggcaaggggcttc
tgtgtggggaagttcactttcctgcgagacccctggaactggctggactttagtgtcatt
atgatggcgtatgtaactgagtttgtaaacctaggcaatgtgtcagctctccgcactttc
agagtgctcagagctttgaaaactatctcagtcatcccagggctgaagactatcgttggc
gccctgatccagtcggtgaagaagctgtcagatgtgatgatcctgactgtgttctgtctg
agtgtgtttgctctgatcggactgcagctcttcatgggaaacctgcggcagaagtgtgtg
aagattccagacttcaatttcactgaaaacctgactgccacgctgaactacagcaccgcc
attaactggacagagtacattagtgatgagagcaattattatttcctcccaggccgcaga
gaccctttgttatgtggaaattcaagtgatgcagggcagtgtccagagggcttttcgtgt
ataaaagcaggtcgtaatcctgactacggctacacaagctttgacacattcagctgggcc
ttcctctcactcttcagactcatgacacaagacttctgggaaaacctctaccaacagacc
ctgcgtgcagctggaaagccctatatgatcttctttgttcttgtgattttcctgggctcc
ttctatctggtgaatctcatccttgccgtggtggccatggcatatgatgagcagaaccag
gctaccatagaagaggctcaacagaaagaggaagagtttcaagccatgctagagcagcta
aagagacagcaggaagaggcacaggttgcggcggcagcagcaacagagagtggggagtac
agcgggagggggggcttgtctgaggaaagctcctccggggggtccagactcagctccaag
agcgctaaagagcgaaggaacaggaggaagaaaagaaaacaaagggaagaagaagaaaaa
gccaatcaggaaaagttccataagtccgcttcagaggacagcattagacggcctggattt
cgattctccatcgatgccaaccgactctcgtatgagaagaagtgttcaactcctaatcag
tctcttctcagtattcgtggatctctcttctccccaaggaggaacagtcgcgcgagtctg
ttcagttttcgcggtagagcgcgagactttggctcagagaatgattttgctgatgatgag
cacagcacgtttgaggatagcgacagccgccgcggatcgcttttcgtacctcgttgtgtt
gagagacgaagttccactgtcagtcactgcagcctcgctcccagaattatgctcccagcc
aacgggaaaatgcactgcactgtcgattgcaatggagtggtctccctggtgggtgggacg
tctgtgccaacatcaccaattggacgtttgttacctgagggcacgaccactgagtctgag
gcacgcaaaaaacgttcaggatcacaccagccatctgattatctggatgagacagtagcc
agaaaaagagctctcagtgtggccagcattttgacaaacactatggaagagcttgaggaa
tcgcggcagaagtgccctccatgctggtacaagtttgccaacagcttcctgatctgggac
tgctgtccagcctggttgaaggtgaaggagattatgaacatggtggtgatggacccgttt
gtagacctggccataaccatctgcattgttctcaacacactcttcatggctatggagcac
taccctatgacagaaaggttcaaccatgtgctgtcagttgggaacctggtattcacaggg
atcttcacagcagaaatgtgtctgaagttaattgctctagacccatattactatttccaa
gaaggctggaatatctttgacggcatcatcgtgagcctgagtctcatggaactgggcctg
gccaatgttgagggactttctgtgttgcggtcctttagattgttaagagtctttaagctg
gcaaagtcttggcccaccctgaacatgctgataaagatcattggtaactcagttggtgct
ttgggaaatctaaccctcgtccttgccatcatcgtcttcatcttcgctgtggtgggaatg
cagctgtttggaaagagctaccgtgagtgtgtctgcaagatctcagctgactgtgtgttg
ccgcggtggcacatggacgatttcttccactccttcctgattgtgttccgagtgctttgc
ggtgaatggatcgaaaccatgtgggactgcatggaagtggcgggacagacaatgtgtctc
atcgtcttcatgatggtcatggtcattgggaatctggtggttttgaacctcttcctggcc
ttgctgttgagctctttcagtgccgataacctggccgccacggatgatgacagcgaaatg
aacaacctgcagatcgccgtgggcagaatacagaaaggtatcgcactggtcaagtccact
ttacgccagttcctccaaagtctctgcctggccgtctctaaacctcgtgctctagacgaa
gagaaaccccttgacgacctccacagcaacggcaaggagaactgcttgtccaatcatgct
ccggtggccgtcgacctcactaaagactatctgaaggagggctgtgtctcccctggtaat
ggagtggaaggtcatgtaaagtatggaatcgaggaaggcgactacatgtcgttcatacac
aatcccagcctcactgttacagtaccgattgcggtgggagagtcggactttgaaaatctg
aatacggaagatttcagtagtgactcgtctgacgtcgagggcagtaaagagaagctgcct
gttgacgccgttctcagttcctcagaagggagcacagtggatatccgaccccctggagaa
ggggcggagtctgtggagctggagccggaagagtccctggacccagaggcctgcttcaca
gaaggctgtgtgattaggtttcagtgctgtaaagtcgatgtggagacgggaaaagggaag
agttggtggattctcaggaaaacctgcttcattattgtagagcacaactggtttgagtcc
tttatcatctttatgatattactcagcagtggagcattggcttttgaggacatttacatc
gagcaacgtaagacgataaagacagtgttggaatatgcagataaagtcttcacatacgtc
tttattttggagatgcttctgaagtgggttgcttatggcttcgtcaaatacttcaccaac
gcctggtgttggcttgacttcctgattgttgatgtgtcattagtgagtctggtagcaaat
gctcttgggtactctgaactaacagccattaagtctctgagaacactgcgtgctcttaga
cctttgagagcattgtcgcgctttgagggaatgagggttgtagtgaatgccctgctggga
gccatcccttccatcatgaatgtgctactagtgtgtttgatcttctggctgatcttcagt
atcatgggggtgaacctttttgcggggaaatactaccattgtgtcaatatcaccaacgat
gagatgtttcccatcagtgtggtcaataacaggtcagattgctttgccctgattgcgaac
aatgactcggcgcgctggaaaaatgtgaagattaatttcgataatgtgggagctggatac
ctggcactactgcaagtggccacatttaaaggatggatggacatcatgtatgcagctgtg
gattctcgtgatttggagcagcagcctgactatgaatcaaacctttacatgtacctgtac
tttgtcatcttcattatcttcggctccttctttactcttaacctcttcattggtgtcatc
attgataacttcaatcagcagaagaaaaagctaggaggtcaggatatcttcatgacagaa
gaacaaaagaaatattacaatgccatgaagaaactgggatctaagaagcctcagaagcca
attcccaggcctgcgaacgtgtttcaaggcctcatctttgacttcatcaccaaacaagcc
tttgacattgtgattatgatcctgatctgcttgaacatggtgaccatgatggtggaaacc
gacgatcagacaaaggatatggacaatattctgtactggataaacctggttttcatcatc
ctcttcactggagaatgtgtgctcaagatgatctccctgcggcactactacttcaccgtt
ggctggaatgtgtttgactttgtagtggtgattctctcaattgttggcatgttcctttct
gatatgattgagaaatattttgtatcgccaacgttattccgagtcatccgacttgccaga
atcggccgtattcttcgtctcatcaaaggagccaaaggcattcgtacactcctgtttgcc
ttgatgatgtcacttcctgccttgttcaatattggcctcctcctgttcctggtcatgttt
atctatgccatcttcggaatgtccaactttgcctacgtgaagcacgaggcggggatcgat
gacatgtttaactttgagacattcgggaactcgatgctttgcttgttccagattacaact
tcagctggatgggacggcctcctggcacccatactgaacaagcaagatccggattgcgac
agcgaattggagcacccaggcagtatgtaccgtggcgactgcggaaacccctcggtcggc
atcttcttctttgtaagctacattatcatctgcttcctgattgtggtgaacatgtacatc
gccgtgatcttggagaacttcagcgtagccacagaggagagcgccgaaccactgagcgag
gatgactttgaaatgttctatgaagtctgggagcgattcgatcctgacgccacgcagttt
gtggagtacgagaagctttctgaatttgcggatgctttggatcctccgttacgtatcccc
aagccaaacaagatccagctcatagccatggacctgcccatggtcagtggcgaccgcatc
cactgcctggatatcctgttcgcctttaccctgagggtactgggagaggagggcgagatg
gatgccctgaggggacagatggaggatcgtttcatggcctccaatccctccaaagtctcc
tacgagccaatcacgacaactctccgcaggaaacaggaggagatgtcggccatcgtcatc
cagagggccttccgacggtaccgtataaggcaaacagtaaagaaggcctccgaagcctac
cgacagcagctgcaagatgggagtgggtgcatcccggagaaagaggtgctcgtcattgaa
aagtttcaagagaactccgcatcggaaaaaacggatatgactccttcctctgcctctccg
ccgtcttataacagtgtggccaagtcagagaaagacaaatacgaaaaggagaggagggaa
aaggagtacaaagcaaaagatgcaagagacagaaaaaaatga
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integrated database retrieval system
