Carassius auratus (goldfish): 113107872
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Entry
113107872 CDS
T07313
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04010
MAPK signaling pathway
caua04020
Calcium signaling pathway
caua04218
Cellular senescence
caua04260
Cardiac muscle contraction
caua04261
Adrenergic signaling in cardiomyocytes
caua04270
Vascular smooth muscle contraction
caua04530
Tight junction
caua04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113107872
04020 Calcium signaling pathway
113107872
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
113107872
09144 Cellular community - eukaryotes
04530 Tight junction
113107872
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
113107872
09153 Circulatory system
04260 Cardiac muscle contraction
113107872
04261 Adrenergic signaling in cardiomyocytes
113107872
04270 Vascular smooth muscle contraction
113107872
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113107872
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113107872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113107872
NCBI-ProteinID:
XP_026126460
Ensembl:
ENSCARG00000024523
UniProt:
A0A6P6Q2L3
LinkDB
All DBs
Position
8:complement(29349229..29420390)
Genome browser
AA seq
2109 aa
AA seq
DB search
MDEPEEPTEGANYASGSRAPVSSDVPPVWSEVPPVTSHHSPAQSAALSWQAAINATRQSQ
GTPKTMNLSAAASTAPAGSLAQRKRQQYAKSKKQGSTTNSRPPRALFCLTLNNPVRRACI
NLVEWKPFDIFILLSIFANCVALAVYIPFPEDDSNSTNHDLETVEYAFLIIFTIETFLKI
IAYGLVMHQNSYVRNGWNMLDFVIVIVGLFSVVLELVTKDRDVSGQSGGKPGGFDVKALR
AFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHAT
CYLNGTRTFAEEDPAPCSLSGHGRHCPVNGTLCRDGWHGPNNGITNFDNFLFAMLTVFQC
ITMEGWTDVLYWMNDAMGSELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARG
DFQKLREKQQLEEDLKGYLDWITQAEDIDPDNDEEGDQEAKRSRVMLGDLTHRKNTGNSG
WFSQSTETHASIPTSETESVNTENPGEDEKVCCGPICQKLTKSKFSRWRCWNRFCRRKCR
AVVKSTVFYWLVILLVFLNTLTISSEHYNQPDWLTEVQGVANKVLLALFTSEMLIKMYSL
GLQAYFVSLFNRFDCFVVCGGIVETILVEIEIMSPLGISVFRCVRLLRIFKVTRHWASLS
NLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETVTKRSTFDNFPQALLT
VFQILTGEDWNTVMYDGIMAYGGPSSSGMLVCIYFIILFICGNYILLNVFLAIAVDNLAD
AESLNSAQKEEEKRNKRKKSRSMSIYKRDGDDGDVKASGDQEGDQDQTEDVIDSSEEDEE
DEPEVPSGPRPPRLSELSLREKMPPIPEGSAFFIFSNTNPIRVACHRLINHQIFTNLILI
FIMLSSVSLAAEDPIRNFSARNIVLGYFDYAFTAIFTVEILLKMTAFGAFLHKGAFCRNY
FNLLDLLVVGVSLVSFGIQSSAISVVKILRILRVLRPLRAINRAKGLKHVVQCVFVAIRT
IGNIMIVTTLLQFMFSCIGVQLFKGKFYRCSDDAKTSPEDCKGTYIVYSIGETALPQMRE
RIWYNSDFNFDNVLMAMMALFTVSTFEGWPALLYKAIDSNKENMGPIYNYRVEISIFFII
YIIVIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPY
QYKFWYVVNSTGFEYVMFVLIVLNTLCLAIQHHGQSRLFNYGMDILNMVFTGVFAVEMIL
KLVAFKPKGYCVDPWNGFDAVVVIGSVVDIILSQHYFADAWNTFDALIVVGSIVDIAITE
INNTEGSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFI
YGVIGMQVFGKIAMVDGTSINRNNNFQTFPQAVLLLFRCATGEAWQQIMLACLPGKQCDS
ESDYNPGEEKTCGSNFAILYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLD
EFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGT
VMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEITV
GKFYATFLIQDYFRKFRKRKEQGLVGCQPYLNSTTALQAGLRTLHDIGPEIRRAISCDLQ
DEGLVDINLHEEEEIYERNGVVFGNHVSGDQYGSVTQRPLQLPLTLCSSQNYCPSMSDKS
SNSNINNANVPAVTAFPNGWHRRCRRLSGTLVSSLNTYLNLRSDGELQLRTHSRRPSISA
VGYPIIHVENSTLGDISDDDRNSGEYFSGDEFNEDDVMLATDRSFFQDALSDGAPAGQQD
VCECVCDDGEQLISQQPQRSSKRLLLSTTQSSHKPAFHFECLRKQNSQDEIPLHPSVLRQ
HQVKTATGQESSRTRLSPTRSIRSWVTPPATPPPYTPLIQTTVSASSTPGLVHRGFWNSH
QASDWSTRSPSPSLLKVPPRLSGHHLQQRSSAQSLVEAVMISGGLGKYAKDPKFVTVTKH
EIADACDMTIDEMESAASNLLNVTLGHGPETDEVGLCQNNLRDYSDEDTDTSNKREEDLT
DEMIYVSVL
NT seq
6330 nt
NT seq
+upstream
nt +downstream
nt
atggacgagccagaggaaccgactgaaggggcaaactatgccagtggcagcagagccccc
gtctctagtgatgtcccccccgtctggtcagaagtaccgccggtcaccagccatcattca
ccggcccagtccgctgcgctctcctggcaggctgcgattaatgccaccagacagtctcag
ggcacccccaaaaccatgaacctctctgctgctgcaagcactgctccggccggctcgctc
gcccagaggaaacgccagcaatatgccaaaagcaagaaacagggaagcaccactaatagc
agacctccaagagcacttttctgcctgactctcaataatcctgtgcgcagagcgtgcatt
aacctagtggagtggaaacctttcgatatctttatactgctgtcaatatttgccaactgt
gtggccttagctgtttacatcccctttcctgaagacgattccaactcaactaatcatgat
ttggaaacagtagaatatgccttcctgatcattttcacgattgaaaccttcctcaagata
atagcttatggacttgtgatgcaccagaactcatatgtgagaaacggctggaatatgctg
gattttgtcatcgtcatagtaggtctcttcagtgtggttctggagctggtaaccaaagat
cgagatgtcagtgggcagtcaggtggcaagccgggtgggttcgatgtgaaggctttacga
gcgtttagagttctgcggccccttcgcctggtgtcaggagtgccaagcttacaggtagtg
ctgaactccatcattaaagccatggttcctctgctgcacattgctctgcttgtactattc
gtcatcatcatctatgccatcatcgggctggagctgttcattgggaagatgcatgcaacc
tgctatctgaacggcacgcgtacatttgcagaggaggatccagctccctgttctctttct
ggtcatgggagacactgccccgttaatggcactctgtgtagggatggctggcatggaccc
aacaatggcataacaaactttgacaacttcctgtttgccatgctgactgtgttccagtgt
atcaccatggagggctggactgacgtgctgtactggatgaatgatgctatgggctccgag
ttgccttgggtctattttgtcagtctggtcatttttggctccttctttgtcctcaatcta
gtattgggtgttctaagtggagagttctctaaggagcgtgagaaggccaaggctcgtgga
gatttccagaaactgcgtgagaagcagcagcttgaggaggatctgaagggatatctggat
tggatcacacaagctgaggacatcgaccctgataatgatgaggagggagatcaagaggca
aaacgcagccgggtgatgctgggcgatctcacccacaggaagaacacgggaaattcgggc
tggttcagtcagtccactgagactcatgcaagtatccccacaagtgagacagagtctgtg
aacacagaaaacccaggagaagatgagaaagtctgctgtgggcccatctgtcagaaattg
acaaagtcgaagttcagccgctggcgttgctggaacaggttttgtcgcaggaagtgccga
gctgtggtcaaatccaccgtcttctattggctggtgattctgctggtgttcctcaataca
ctcacaatatcatctgaacattataaccagcctgactggctcacggaggtccagggtgtg
gctaataaggtgttgttagccctgttcacaagcgagatgctgataaaaatgtacagtctg
gggctgcaggcatactttgtgtcccttttcaaccgcttcgactgcttcgtcgtttgcgga
ggcattgtggagacgatcctcgtggagattgagatcatgtctcctctcggcatctcagtg
tttcgctgcgtccggctcctcaggatctttaaagtcacacgtcactgggcgtctctgagt
aacctggtggcatctcttctgaactccatgaagtccattgcgtcccttctgctgttgctc
ttcctcttcatcatcatcttcagtttgcttggcatgcagctctttggcggaaagtttaac
tttgacgagactgttaccaaacgaagcacttttgacaactttcctcaagccctgctgact
gtctttcagatcctgacgggtgaggactggaatacagtgatgtatgatgggatcatggcg
tatggaggaccctcctcctcagggatgctcgtgtgcatctacttcatcatcctcttcatc
tgtggaaactacatcttactgaacgtcttcttggccattgctgtggataacctggcagat
gctgaaagtctgaactcagcccagaaagaggaagagaagaggaacaagaggaagaaaagc
aggagtatgagcatatacaagagagatggggacgatggagacgtcaaggcatctggtgat
caggagggcgatcaggatcagacagaggacgtgattgactcctcagaggaggatgaggaa
gacgagcccgaggtaccgtcaggcccgcggccgccgaggctgtcagagctgagcctcaga
gaaaagatgccccccatcccagaggggagcgccttcttcatctttagcaacaccaacccg
atccgtgtggcatgccatcggctcatcaatcatcagatcttcaccaacctcatcctcatc
ttcatcatgctgagctccgtctcgctggcagccgaggaccccatccgtaacttctccgcc
cgaaacattgttctcggttattttgactatgccttcactgctatatttacagtggagatc
ttgttgaagatgactgcgtttggtgctttccttcacaaaggagctttctgcagaaattac
tttaatttgctggatctgctggtggtgggagtctccctcgtttccttcggcatacaatca
tcggccatttcagtggtgaagatcttgaggattctgcgtgtgcttcgtcctctgagagcc
atcaacagagccaaaggactcaaacatgtggttcagtgtgtgtttgtggccatccggacg
attgggaacatcatgattgtcaccacacttcttcagttcatgttttcctgtatcggtgtg
cagctgtttaaggggaagttctaccgctgttctgatgacgcaaagaccagtcctgaggac
tgcaaagggacgtatatcgtgtacagtattggtgagacggcactgccacaaatgcgtgag
aggatctggtacaacagcgactttaactttgataatgtgctgatggcaatgatggctctc
ttcaccgtctcaacgtttgagggctggccagccctgctgtacaaggccatcgactcaaac
aaggaaaacatgggtcccatttacaactaccgtgtggagatctccatcttcttcatcatc
tacatcatcgtcatcgccttcttcatgatgaacatttttgtgggttttgtcattgtcacg
tttcaggagcagggcgagaaagagtacaagaactgtgaactggacaagaaccagcgccag
tgtgtggagtacgctctgaaagcccgtccgctgaggagatacatccctaaaaacccatac
cagtataagttctggtatgtggtgaattccacgggctttgagtatgtcatgtttgtgctc
atcgttctcaacacactgtgtctggccattcagcatcacggccagtcacgtcttttcaat
tatgggatggacattttgaacatggtgttcacgggtgtctttgcagtcgaaatgattctc
aaactggttgccttcaaaccaaagggttattgtgtggacccctggaatgggtttgatgct
gtggtggtgattggcagcgtagtagacatcattctgagtcagcactattttgccgatgca
tggaacacgtttgatgccttaattgttgttggtagcatcgttgacattgcaatcacggag
atcaataacactgaaggcagtgcaagaatttccatcacattctttcgtctgtttcgtgtg
atgcgcttagtgaagttgttgagcagaggagagggcattcgcacgctcctgtggaccttc
atcaaatcatttcaggctcttccatatgtggctctgctgattgccatgctattcttcatc
tatggtgtcattggaatgcaggtgttcggcaagattgccatggtggatggaaccagtatt
aatcgtaacaataatttccagacctttcctcaagctgtgctcctgctattcagatgtgcg
acgggtgaggcatggcagcagatcatgttggcgtgtttgccgggcaaacagtgtgactct
gagtccgactataaccctggagaggagaaaacctgtggcagcaactttgctatcctctac
ttcatcagcttctacatgctctgtgcttttctgatcattaatctgtttgtcgctgtcatc
atggacaactttgactacctgacgcgtgattggtcaattcttggacctcatcatttagat
gaatttaagaggatttggtcggaatatgatcctgaggccaagggccgtataaaacactta
gatgtggtgacattactgcgcaggattcaaccacctctgggctttggcaagctgtgtcct
catagagtggcttgcaagaggttggttgctatgaacatgccacttaatagtgacggtaca
gtcatgttcaatgcaaccctgttcgctctggtcagaactgctctgaaaatcaagactgaa
gggaatctggaacaagccaatgaggagttacgagccgtcatcaagaagatctggaagaga
actagcatgaaactcctggaccaagtagtgccacctgctggagatgatgaaatcactgtg
gggaagttctatgccactttcctgatacaagactacttcaggaaattcaggaagcgcaaa
gagcaaggtcttgtgggatgccaaccctatttaaacagcactaccgccctccaggctggt
ctgcgcacactgcatgatatcggccctgagatccgtcgagccatatcatgtgatctacag
gatgaaggtctagtagacatcaacctccacgaggaagaagagatatacgagaggaatggg
gttgtgtttgggaatcatgtgagtggagatcagtacggcagcgtcacacagcgtcctctg
cagctcccgcttactctgtgctcctcccaaaattactgtccgtccatgtcagacaaatca
tccaactccaatatcaacaatgccaacgtgccagcggtcactgcctttcccaacggctgg
cacagacgctgccggcggctctctgggaccctggtgtcctctctgaacacctacctcaac
ctcaggagtgatggagaactacagctcaggactcactccagaaggccgagcatcagtgct
gttggatatcccatcatccacgtggagaactccacccttggtgacatcagtgatgatgac
aggaactctggggagtatttcagcggagacgagtttaacgaggatgatgtcatgctggct
acagacaggtcattctttcaggacgctttgagtgatggtgctccagctggacagcaggat
gtgtgtgaatgcgtctgtgatgatggtgagcagctcatatcccagcagccccagaggtcc
tcaaaacgactcctgctgtccacaactcaatcctctcacaaacccgctttccattttgag
tgtctgcgcaaacagaacagccaggacgagatccccctgcatccatcggtcctgcggcag
catcaggtgaagacggcgactggacaagaatcgagtagaacacgactctctccgactcgc
tccatccgctcctgggtcacgcctccggccacgcctccaccctacactcctctgattcag
accacggtcagcgctagcagcactccgggattggttcacaggggcttctggaattcccat
caggcctctgattggtcgacacgttctccctccccctcgctcctgaaggtccccccccga
ctgagcggccatcacctgcagcagcggagcagcgctcaaagcctggtggaagccgtgatg
atatctggtggattgggcaaatatgccaaggatccaaagtttgtgacggtgacaaaacat
gagatcgcagatgcttgcgacatgacaattgatgagatggaaagtgctgctagtaattta
ctgaatgtgacgctaggccatgggccggagacagacgaggtgggcctgtgtcagaacaat
ctccgcgactacagcgatgaggacacggacacaagcaataaacgcgaggaggatctgaca
gacgaaatgatctatgtctcagtattataa
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integrated database retrieval system
