Carassius auratus (goldfish): 113116716
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Entry
113116716 CDS
T07313
Name
(RefSeq) protein SMG9
KO
K18735
protein SMG9
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113116716
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
113116716
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
AAA_16
DUF6079_1st
URGCP_GTPase
AAA_30
MMR_HSR1
AAA_14
NB-ARC
Motif
Other DBs
NCBI-GeneID:
113116716
NCBI-ProteinID:
XP_026140820
Ensembl:
ENSCARG00000056845
UniProt:
A0A6P6R6W1
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All DBs
Position
16:complement(27462402..27468063)
Genome browser
AA seq
503 aa
AA seq
DB search
MSESGHSQPGIYGQGRRRRRRRDRDPGPAAQNLSGPSRDRDYVPRERRDGSEEPTGPLLQ
KTPIILAKPPGERSKPSVPASGAPSEKPIMLIKTRDEGGKPGNPPDVAPSVSGAGTAKLE
REGQRPTQPVYQIQNRGMGSAASGGAVDPVIGQTKLLPPEKMKHSIKLVDDQMNWCDSAM
EYLRDQTDMLVVGVIGLQGTGKSTIMSLLSANSPEEDQRAYVFRAQTQEIKERAGNQSSG
IDFYITQERVIFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQITAFLFTVC
HVVIVIQDWFTDINLYRFLQTAEMLKPSTPSASHDSSGSSGADDGSEYYPHIVFLQNKAR
REEFCPRNLKKMHMAVDKLMAHSHLKYKGTLSMLDCNIFPGLNRDYLETEVNLFLLPMME
NDGEDALTRAGSGPPLFSLLPGYRGHPSFSSLVSKFRSQILAMSRSQLSHTILTEKNWFH
YAARIWDGVKKSSALSEYSRLLS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtcgggtcacagtcagcccgggatctacggacagggaaggaggcggcggcga
cggagagaccgagacccaggaccagcggctcaaaacctctccggacccagtcgagatcga
gactatgttccccgtgagcgcagggatggcagtgaggaacccacaggacctcttctacag
aagactcccattatacttgctaagcctcctggagagcgatccaaaccaagtgtgccagca
agtggagccccatcagaaaagccgatcatgctcattaaaaccagagatgaaggcgggaag
cctgggaaccctcctgatgtagctccttcagtctcaggtgcaggaactgccaaactggag
agggaaggccagcggccgacccaacctgtgtatcaaatccagaacagaggcatgggctca
gctgcatctggtggagctgtggatcctgtgattggccagactaagctcctcccccctgag
aagatgaagcacagcattaagctagtggatgaccaaatgaattggtgtgacagcgctatg
gagtacctgcgagaccagacggatatgttagtagttggggttattgggctacaaggcaca
ggcaagtccacaatcatgtctctcctgtctgcaaacagccctgaggaggaccagagggcg
tatgtgttcagagctcagacgcaggaaatcaaggagagagctgggaaccagagcagtgga
atcgatttctacatcactcaggagagggtcatctttctggacacgcagccaattctaagc
ccctctattttggatcatctcattaacaatgaccgcaagcttcctccagaatacaatcta
ccacatacatatgtggagatgcagtctctgcagatcactgccttcctctttaccgtatgc
catgttgtgattgtgattcaggactggttcactgatatcaacttatataggtttctgcag
actgctgagatgctgaaaccctcgactccatctgccagtcatgacagcagcggctcctca
ggggcagatgatggctcggagtattatcctcacatagttttcttgcagaacaaagcaagg
agggaggagttctgtccacggaatctgaagaagatgcatatggcagttgacaagcttatg
gcccattcccacctaaaatataaaggcaccttatccatgctggattgtaacatattccca
ggactgaatcgagattacttggagacagaagtcaatcttttcctcttacctatgatggag
aatgatggggaagatgctttgacaagagcaggttcaggtccccctctcttctcactgctg
cctggttacagaggtcatcccagcttttcttcactggtttctaaattccgcagtcagatc
ttggctatgtcccgcagtcagctctcacacacaatcctcactgagaaaaactggtttcat
tatgcggctagaatttgggatggtgttaagaaatcatctgcgctgtctgaatatagccga
cttctgtcatag
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