Corylus avellana (European hazelnut): 132165317
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Entry
132165317 CDS
T09426
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cave03036
]
132165317
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cave04812
]
132165317
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
132165317
Cytoskeleton proteins [BR:
cave04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
132165317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT_GCN1
HEAT_EZ
HEAT_2
TPR_DNAAF5
HEAT_GCN1_C
TOR1L1_N
Vac14_Fab1_bd
Cnd1
TPR_CAND1
HEAT_MROH2B_C
Adaptin_N
PDS5
Tti2
INTS1_R4
UTP20
TPR_TTI1_C
TPR_IMB1
HEAT_Maestro
MMS19_C
VPS15-like_hel
V-ATPase_H_N
MMS19_N
Dopey_N
Npa1
IFRD
Motif
Other DBs
NCBI-GeneID:
132165317
NCBI-ProteinID:
XP_059431799
LinkDB
All DBs
Position
ca11:complement(2311254..2327411)
Genome browser
AA seq
1428 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHEVLEGSRKSLSSAETTALVDCCLDLLKDNNFRVSQG
ALQALDSAAVLSGDHLKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMQVSSPTIIVE
RAGSYAWTHKSWRVREEFVRTVTSAIGLFASTELPLQRAILPPILQMLNDSNPGVREAAI
LCIEEMYAQAGTQFRDELQRHHLPTSMVKDINARLERIEPQVRSSDGLAGNFAAGEIKAA
SLNHKRSSPKAKSSSREMSLFGAEGDITEKPIEPIKVYSEKELIREIEKIASILVPEKDW
SIRISAMQKVEGLVSGGAADYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKE
LLADFEACAETFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVPRVLPRIADSAKNDRS
AILRARCCEYALLILEHWPDAPEIQRSADLYEDFIRCCVADAMSEVRSTARMCYRMFAKT
WPERSRRLFSSFDPVIQRIINEEDGGIHRRHASPSIRDRGAPTSFTSQSSAPSNLSGYGT
SAIVAMDRSSSLQSGTSLSSGLLLSQAKSRSKVTERSLESVLHSSKQKVTAIESMLRGLD
LSDKHNSSMLRSSSLDLGVDPPSSRDPPFPPAVTASNHLASTLMAESTASSISKGSNRNG
GLVFSDIITQIQASKDSGKLLSQSNVASEPLPAFSSYSARRASEEINDMREARRLMNPNI
DRHYVDTPYRDGNFRESQNSHIPNFQRPLLRKNVAGRMSAGRRKSFDDNQLSLGEMSNYV
DGPASLSDALSEGLSTSSDWSARVAAFNYLRSLLQQGPKGIQEVIQNFEKVMKLFFQHLD
DPHHKVAQAALSTLADIIPSCRKPFESYVERMLPHVFSRLIDPKELVRQPCATTLEIVSK
TYSIDSLLPALLRSLDEQRSPKAKLAVIDFAISSFNKHAMNPEGYANSGILKLWLAKLTP
LAHDKNTKLKEAAVTCIISVYSYFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLM
NFLQNKKERRPKSSYDPSDIVGTSSEEGYIGASKKSNFYGRYSAGSIDSDGGRKWSSTGN
IGQAASDETRENLYQNFDTGSNADGLSSKTKDMSYTVNSAGQNLWSSRLENVNNDVNGEG
LSTPHLDVNGLMRSDQLAVVEVLAHANEAPTELDLNQYKPKAVNIIAMPDAGPSIPQILH
LISNGNNESPTASKRGALQQLLEASMANDHSIWSKYFNQILTVVLEVLDDSDSSIRELAL
SLIIEMLKNQKDAMEDSVELVIEKLLHVAQAIVPKVSNEAEHCLTIVLSQYDPFRCLSVI
VPLLVTEDEKTLVTCINCLTKLVGRLSQEELMVQLPSFLPALFEAFGNPSADVRKTVVFC
LVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARTGTSVDADHD
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcattggagctggcgcgcgccaaggacacgaaggagcggatggccggcgtg
gagcggctgcacgaggtgctcgagggctcgcggaagagcttgagttcggcggagacgacg
gcgctcgtggactgctgcttggatctcctcaaggacaataacttcagagtctcgcagggg
gctctgcaggctttggactccgctgccgtgctctccggcgaccacctcaagctccacttc
aacgcactcgtccccgccgttgtcgaccgccttggcgacgccaagcagcctgtccgcgac
gctgccaggcgcctcctgctcactctcatgcaggtttcatctccaactatcattgttgaa
agagctgggtcgtatgcttggacacacaaaagctggagggttagagaagagtttgtacgt
actgtcacatcagcaattggtctttttgcatctaccgagcttcctctgcagcgggctatt
cttcccccgattttgcagatgcttaatgattccaatcccggtgttagagaagcggctata
ttgtgtattgaggagatgtatgcacaggctgggactcaattccgtgatgaacttcagcgc
caccatcttccaacatccatggtgaaagatatcaatgccaggctagagaggatagaacca
caagttcgctcttcagatggacttgcaggtaattttgctgctggagagattaaagccgca
agccttaatcacaagagaagtagtccaaaggccaagagttcatctagggagatgtctctt
tttggagcagaaggagatatcacagaaaaacctatagaacctattaaagtatactcagag
aaggagctaatacgcgaaattgagaagattgcttctatccttgtaccagaaaaagattgg
tctatcaggatttctgcaatgcagaaagttgaaggccttgtttctggaggtgctgctgac
tatccgtgtttccggggactcttgaagcaacttgttggccctctaagcacacaattatct
gatcggaggtctagcatagtgaagcaggcgtgccatctattatgctttttgtcaaaggag
ctgttggcagattttgaggcatgtgcagagacgttcattccagtgcttttcaagctggtt
gtgatcactgtacttgtaattgcagaatctgcagataactgcataaaaacgatgttgcgt
aactgcaaagttccccgtgtgctccctcgtattgccgattctgcaaaaaatgaccgcagt
gcaatactccgtgcaaggtgttgtgaatatgcactattgatattggaacattggcctgat
gcgcctgaaatacagcgatcggcagatctttatgaagattttataagatgttgtgttgca
gatgcaatgagtgaggtacgatcaactgcaagaatgtgctatagaatgtttgcaaaaact
tggccagagcgttcccggcggttattttcatcctttgatcctgttattcaaaggataata
aatgaagaggatggaggcatacataggcgacatgcttctccttccatccgtgatagaggt
gcaccgacttcatttacctctcaatcatctgctccctcaaatctatctggatatggaaca
tctgctattgttgcaatggacagaagttcaagtttacagtcagggacatcactgtcttct
ggactactactgtcacaagcaaagtcacgtagtaaagttactgaacgtagtcttgaaagt
gtgttgcattctagcaaacagaaggtcactgcaattgaaagcatgctcagaggtttggac
ttgtcagacaaacataattcttcaatgctccgatcatctagtttggatctaggagttgac
cctccatcatctcgtgatccaccattccctcctgctgtcacagcttctaatcacctggca
agcactttaatggctgaatcaactgcctctagtatcagtaaaggtagtaaccgaaatggt
ggcttagttttttctgacatcatcacccagattcaagcttccaaagattctggtaaattg
ttgtctcaaagtaatgtggcatctgagccattgccagcattttcatcatactcagctagg
agggcttctgaagagattaatgacatgagggaggctaggcgacttatgaaccccaacatt
gataggcattatgttgatacgccttacagagatggaaacttcagggaatcacagaacagt
cacattcccaattttcagaggccgcttttaagaaagaatgttgctggacggatgtctgca
ggcaggagaaagagtttcgatgacaaccagctgtcacttggggagatgtcaaattatgta
gatggtccggcatcacttagtgatgctctgagtgagggactcagtacaagttctgactgg
tctgctagggttgcagctttcaattatcttcgttctttgctgcagcaaggcccaaaaggt
attcaagaagtaatccagaattttgagaaggtaatgaagctgtttttccagcacttggat
gatccccaccataaagttgcacaagctgctctctcaacacttgcagatattattccatct
tgccgaaagccgtttgagagttacgtagaaaggatgttaccccatgttttctcacggtta
attgacccaaaggagttagttaggcaaccatgtgctacaaccttggaaattgtaagcaaa
acttacagtattgattctctcttacctgctttgctccgctcactggatgaacagcgatca
ccaaaggccaaattagctgttattgattttgctatcagttcctttaacaagcatgcaatg
aatcctgaaggctatgccaatagtggtattcttaagttatggcttgctaaattgactcct
ttggcccacgataaaaatactaagctgaaggaagcagctgttacgtgcattatatctgtt
tactcctactttgattcaacagccgtcctgaattttattcttagtttatcagttgaagaa
caaaattccttgagacgagcccttaaacaatatactcctcgcattgaagtggacctaatg
aactttttgcagaacaagaaagagcgacgaccgaagtcttcttatgatccatctgatatt
gttggaacatcttctgaagaaggatatattggtgcatcaaagaagagtaatttctatgga
aggtattctgctggttccattgatagtgatggtgggaggaagtggagttctaccggaaat
attggccaagcagcttctgatgaaactcgggaaaacttgtatcagaattttgatactggt
tctaatgctgatggtctttcttccaaaaccaaggatatgtcttacacggtcaattctgca
ggtcagaacttgtggtctagccggctagaaaatgttaacaatgatgtaaatggggaaggt
ttgtctactcctcatctggacgttaatggtctgatgaggtcagaccagttggcggttgta
gaagtcttggcccatgctaatgaagctccgactgagttggaccttaatcagtataaaccg
aaagctgtaaatattattgctatgcctgatgcaggaccaagcattcctcaaattctccat
ctgataagcaacgggaacaatgagagccctactgcaagtaagcgcggtgcacttcagcag
ttactcgaagcttccatggctaatgatcactctatttggtctaagtacttcaatcaaatt
ctgacagttgtacttgaggtgttggatgattctgattcctctattcgggaacttgctctt
tcattgattattgaaatgcttaagaaccagaaagatgcaatggaagattccgttgagtta
gtgattgagaagctgcttcatgttgctcaggctattgttcccaaagtttcaaatgaagca
gagcactgcctgactattgttttgtctcagtatgatcctttcagatgtctaagtgttatc
gtgcctttattggttaccgaagatgagaaaactcttgttacttgcataaactgtttgacc
aagctcgtgggtcggctgtctcaggaggaactgatggttcagctaccctcctttttgcct
gctctttttgaagcatttggaaatccaagtgcggatgttcgtaagactgttgttttctgt
ctagtggatatttatatcatgcttggaaaagcattcttgccatacttggaggggcttaac
agcacacaactgcggttggtcacgatatatgctaatcgaatctcacaggctaggacaggc
acttcagtagatgctgaccatgattag
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integrated database retrieval system
