Corylus avellana (European hazelnut): 132175200
Help
Entry
132175200 CDS
T09426
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cave03036
]
132175200
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
132175200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
nSTAND3
AAA_18
AAA_14
Viral_helicase1
NPHP3_N
AAA_30
AAA_5
NACHT
AAA_28
TIP49
ATPase_2
AAA_2
Cytidylate_kin
RNA_helicase
ABC_tran
TsaE
DUF815
AAA_24
RuvB_N
AAA_33
AAA_11
bpMoxR
AAA_17
KAP_NTPase
nSTAND1
Rad17
PduV-EutP
SLFN-g3_helicase
IstB_IS21
AAA_7
NB-ARC
AAA_19
AAA_3
ResIII
NTPase_1
Mg_chelatase
SRPRB
nSTAND6
CPT
Motif
Other DBs
NCBI-GeneID:
132175200
NCBI-ProteinID:
XP_059443055
LinkDB
All DBs
Position
ca3:5111607..5118982
Genome browser
AA seq
462 aa
AA seq
DB search
MSTPMEITLQNPRDADISDQQDGVVEASAPLPPPTPPPLSEYKVLVSVEARLKPSSTARI
DDVRTSIERMLENRNLTYVDGPIPVPLDDPFLTENVERICIGDTDEWVLNHEVLLFWQVK
PVVHVFQLSEEGPCEDLSGDGQLSTFNEWILPAREFDGMWESLIFESGLKQRLLRYAASA
LLFTEKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNYRYPQCQLVEVNAHS
LFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV
VNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPPLQARYEILRSCLQ
ELIRKAILSSFQDCDDLVLLNYTSMKEKLNMPAGTEDVQTPFNLSKQLLEAAEACEGLSG
RALRKLPFLAHAAVSDPYNCDPRRFLCTMIDTAKRELSELHD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcccatggagatcacgcttcaaaaccctcgagacgccgatatctccgaccaa
caagacggcgtcgtcgaggcctcggctcctcttcctcctcctactcctcctccactctcc
gaatacaaagtcctcgtttcggttgaagcgcgcttaaaaccctcaagcacagctcggatc
gacgatgtccgtacgtccattgagagaatgcttgaaaataggaatttaacctatgttgac
ggccccattccggtgccgcttgatgatccgtttctcacagaaaatgttgaaagaatctgt
attggtgatacggatgaatgggtgctgaaccatgaagttcttttgttttggcaagtgaag
cctgttgtgcatgtctttcagcttagtgaagaaggaccatgtgaggacttaagtggagat
ggccaactttctaccttcaatgaatggattcttcctgcgagggaatttgatggcatgtgg
gaaagcttaatatttgaatctggtctcaagcaaaggttgttacggtatgctgcaagtgca
ttgctctttactgaaaagggtgttgatcctttccttgtgtcatggaatcgcattattctt
ttacatggacctccaggaacaggaaagacatctttatgtaaagcattagcccaaaagtta
tctatacgatttaactacagatacccgcagtgccaattggttgaagttaatgcacattct
ttgtttagcaaatggttctccgaaagtggcaagctggttgcaaaactattccaaaaaatt
caagaaatggttgaggaagaaaacaatctggtatttgttttgattgatgaagttgaaagt
ctcgctgctgctagaaaagcagctttgtctggttctgaaccttcagattctattagggtt
gtgaatgccttactaactcagatggataaattgaaatcatcgccaaatgtgataattctg
acaacttccaatataactgctgcaatagatatcgcttttgttgatcgagctgatatcaaa
gcatatgtcggtcctccaccactgcaagctcgttatgaaattttaaggtcctgcttgcag
gaacttatccgaaaggcaatactatcaagttttcaggattgtgatgacctcgtacttctc
aattataccagtatgaaagagaagttgaacatgcctgctgggacggaggatgttcagaca
ccatttaacctgagcaagcaattgcttgaagctgcagaagcttgtgagggattgagcgga
cgagctttaaggaagcttccatttttggcgcatgcagctgtctccgatccttataattgt
gaccctaggaggttcttgtgtacaatgatagatacggcaaaaagggagctctccgagcta
cacgactga
DBGET
integrated database retrieval system
