Campylobacter avium: CAV_0663
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Entry
CAV_0663 CDS
T05533
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cavi
Campylobacter avium
Pathway
cavi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAV_0663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cavi03019
]
CAV_0663
Messenger RNA biogenesis [BR:
cavi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CAV_0663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_PNO1_2nd
KH_2
zf-C4H2
Cas3_HD
KH_KhpA-B
KH_NusA_2nd
dUTPase
Motif
Other DBs
NCBI-ProteinID:
ASQ30330
UniProt:
A0A222MXD6
LinkDB
All DBs
Position
complement(641663..643216)
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AA seq
517 aa
AA seq
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MLIIFYIFIAVIIGVGIGYLVAKKIDEAKYNIFVEQAKARAKAIEHEAELVLKDAKNHIL
NAELEIKKKYEDKSHKVQKEYNQKIEELSKKEQKIKAYESEIEKSKEELDKSKSKAVNLY
NENLRLKDSYNTKLDELIRVLEHSSGLTQNEAREIILKKVEEKSRDEISHIVRKYEEEAK
SEAKRKANYIIAQATSRFAGEFAAERLINVINIKNDELKGRIIGKEGRNVKTLEMLLGVD
IIIDDTPGAIIISCFNLYRRAIATKVIELLVEDGRIQPARIEEIYEKVCKEFEDSILEEG
QTILMDLNISKMHPEIVKLIGKLKYRASYGQNALAHSLEVAHLAGIIAAECGGDENLARR
AGILHDIGKALTHDFEGSHVDLGAELCKRYKEHDVVINAIYAHHGHEEATSIESAAVCAA
DTLSAARPGARREVLEAFLKRVSELEDIAKSKQGIKNAYAINAGREIRVIVNAELVNDDE
SVLLAKEIADEIQEKVQYPGEIKVNVIRELRAVDYAR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgttaataatattttacatatttatagccgttatcataggcgtggggataggatattta
gttgctaaaaagatagatgaagccaaatacaacatctttgtagaacaagccaaagcaaga
gcaaaagccatagaacacgaggccgaacttgttttaaaagatgcgaaaaatcatatctta
aatgccgagcttgaaattaagaaaaaatacgaggataaaagccacaaggttcaaaaagaa
tacaaccaaaaaatagaggaattgagcaaaaaagagcaaaaaatcaaagcttatgaaagc
gaaatcgaaaaaagcaaagaagagcttgataaaagtaaaagcaaggctgtaaatctctac
aatgaaaatttgagattaaaggatagctataacacaaagctagacgagcttataagagtt
ttagagcactcatcaggacttacgcaaaatgaggcaagggaaatcatacttaaaaaggtc
gaggaaaaatcaagagatgaaatttcgcacatagtaagaaaatatgaggaggaagccaag
agcgaagccaagagaaaggcaaactacatcatagcgcaagctacctcgcgttttgccggt
gaatttgcagccgaaagacttataaatgttataaatataaaaaatgacgagcttaaagga
cgcatcataggcaaggaaggaagaaatgtaaaaacccttgaaatgctacttggcgttgat
atcatcatagacgacactccaggagctataataattagctgctttaacctttacagaaga
gcaatagcaactaaggttatagaacttttggtagaagatggccgcatacaaccagctaga
atagaagaaatttacgaaaaggtatgcaaagaatttgaagacagtatacttgaggaaggg
caaaccatactcatggatttaaacatttctaaaatgcaccctgaaatagttaaattaata
ggtaaattaaaataccgtgcatcctacggacaaaacgccttagcacactcattagaagta
gcacatctagctggaattatagcagctgagtgtgggggcgatgagaatttagcaagaaga
gctggaattttacacgatataggaaaagccttaacacatgattttgaaggctctcatgtg
gatttaggagctgaactttgcaaaagatacaaagaacacgatgtggttataaatgccatt
tacgcgcaccacggacacgaggaggcaaccagcatagaaagtgcggctgtatgtgcggct
gataccttaagtgctgcaagaccgggtgctagacgcgaggttttagaagctttcttaaaa
agagtaagcgaacttgaggatatagcaaaatcaaaacaaggtattaagaatgcctatgcg
ataaatgctggcagagaaataagagtaatagttaatgcagagcttgtaaatgacgatgaa
tcggtacttttggccaaagaaattgcagatgaaattcaagaaaaagtgcagtatcctggc
gaaataaaggtaaatgtcataagagagcttagagctgtggattacgcaaggtaa
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