KEGG   Campylobacter avium: CAV_0663
Entry
CAV_0663          CDS       T05533                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
cavi  Campylobacter avium
Pathway
cavi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cavi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CAV_0663
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cavi03019]
    CAV_0663
Messenger RNA biogenesis [BR:cavi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CAV_0663
SSDB
Motif
Pfam: RNase_Y_N HD HDOD KH_1 KH_PNO1_2nd KH_2 zf-C4H2 Cas3_HD KH_KhpA-B KH_NusA_2nd dUTPase
Other DBs
NCBI-ProteinID: ASQ30330
UniProt: A0A222MXD6
LinkDB
Position
complement(641663..643216)
AA seq 517 aa
MLIIFYIFIAVIIGVGIGYLVAKKIDEAKYNIFVEQAKARAKAIEHEAELVLKDAKNHIL
NAELEIKKKYEDKSHKVQKEYNQKIEELSKKEQKIKAYESEIEKSKEELDKSKSKAVNLY
NENLRLKDSYNTKLDELIRVLEHSSGLTQNEAREIILKKVEEKSRDEISHIVRKYEEEAK
SEAKRKANYIIAQATSRFAGEFAAERLINVINIKNDELKGRIIGKEGRNVKTLEMLLGVD
IIIDDTPGAIIISCFNLYRRAIATKVIELLVEDGRIQPARIEEIYEKVCKEFEDSILEEG
QTILMDLNISKMHPEIVKLIGKLKYRASYGQNALAHSLEVAHLAGIIAAECGGDENLARR
AGILHDIGKALTHDFEGSHVDLGAELCKRYKEHDVVINAIYAHHGHEEATSIESAAVCAA
DTLSAARPGARREVLEAFLKRVSELEDIAKSKQGIKNAYAINAGREIRVIVNAELVNDDE
SVLLAKEIADEIQEKVQYPGEIKVNVIRELRAVDYAR
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgttaataatattttacatatttatagccgttatcataggcgtggggataggatattta
gttgctaaaaagatagatgaagccaaatacaacatctttgtagaacaagccaaagcaaga
gcaaaagccatagaacacgaggccgaacttgttttaaaagatgcgaaaaatcatatctta
aatgccgagcttgaaattaagaaaaaatacgaggataaaagccacaaggttcaaaaagaa
tacaaccaaaaaatagaggaattgagcaaaaaagagcaaaaaatcaaagcttatgaaagc
gaaatcgaaaaaagcaaagaagagcttgataaaagtaaaagcaaggctgtaaatctctac
aatgaaaatttgagattaaaggatagctataacacaaagctagacgagcttataagagtt
ttagagcactcatcaggacttacgcaaaatgaggcaagggaaatcatacttaaaaaggtc
gaggaaaaatcaagagatgaaatttcgcacatagtaagaaaatatgaggaggaagccaag
agcgaagccaagagaaaggcaaactacatcatagcgcaagctacctcgcgttttgccggt
gaatttgcagccgaaagacttataaatgttataaatataaaaaatgacgagcttaaagga
cgcatcataggcaaggaaggaagaaatgtaaaaacccttgaaatgctacttggcgttgat
atcatcatagacgacactccaggagctataataattagctgctttaacctttacagaaga
gcaatagcaactaaggttatagaacttttggtagaagatggccgcatacaaccagctaga
atagaagaaatttacgaaaaggtatgcaaagaatttgaagacagtatacttgaggaaggg
caaaccatactcatggatttaaacatttctaaaatgcaccctgaaatagttaaattaata
ggtaaattaaaataccgtgcatcctacggacaaaacgccttagcacactcattagaagta
gcacatctagctggaattatagcagctgagtgtgggggcgatgagaatttagcaagaaga
gctggaattttacacgatataggaaaagccttaacacatgattttgaaggctctcatgtg
gatttaggagctgaactttgcaaaagatacaaagaacacgatgtggttataaatgccatt
tacgcgcaccacggacacgaggaggcaaccagcatagaaagtgcggctgtatgtgcggct
gataccttaagtgctgcaagaccgggtgctagacgcgaggttttagaagctttcttaaaa
agagtaagcgaacttgaggatatagcaaaatcaaaacaaggtattaagaatgcctatgcg
ataaatgctggcagagaaataagagtaatagttaatgcagagcttgtaaatgacgatgaa
tcggtacttttggccaaagaaattgcagatgaaattcaagaaaaagtgcagtatcctggc
gaaataaaggtaaatgtcataagagagcttagagctgtggattacgcaaggtaa

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