KEGG   Berryella intestinalis: JI75_00565
Entry
JI75_00565        CDS       T03545                                 
Name
(GenBank) response regulator SirA
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
cbac  Berryella intestinalis
Pathway
cbac00230  Purine metabolism
cbac00240  Pyrimidine metabolism
cbac01100  Metabolic pathways
cbac01232  Nucleotide metabolism
Module
cbac_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
cbac_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:cbac00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    JI75_00565
   00240 Pyrimidine metabolism
    JI75_00565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbac03400]
    JI75_00565
Enzymes [BR:cbac01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     JI75_00565
DNA repair and recombination proteins [BR:cbac03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    JI75_00565
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone Chordopox_L2
Other DBs
NCBI-ProteinID: AJC11417
UniProt: A0A0A8B8G9
LinkDB
Position
140198..142717
AA seq 839 aa
MQIVKRSGAFERYDGSKIVSAMEKSFAATSASVSPADLERMLGLVERRMEETSATTVEQI
QDLVEETLMSEGHFAQAKAYILYRSRRSALRRDREEIVRLTGAPELDSVLALVQRDFADE
LYGVSAWLARFHGFVKPDMDVDQRLDALIRAAVELTTQEAPLWSNIAARVLAFSFHGKTA
RAMAQRGVGSFYDKVRMLTDLGLYGSYILENYTRDEIDRAAGLIDDARDGLFDYAGLDLM
LRRYVIRTHEGEAVETPQEMFLGVALHLAMREDRAVRMEWVERFYDMLSELKVTMATPTL
SNARKPHHQLSSCFIDTVPDSLEGIYRSVDNFAQVSKFGGGMGMYLGKVRATGGSIRGFK
GAAGGVIRWIRVINDTAVAVDQLGMRSGAVALYLDAWHRDLPEFLQIRTNNGDERMKAHD
VFPAVCYPDLFWKLAKQDMSQEWHLMDPHEILVVKGYALEDYFGEEWERRYLDCVADPRI
SKRTMTVRDVVRLIIKSAVETGAPFAFMRDTVNRANPNPHAGVIYCSNLCTEIAQNTSAM
ETVSREVVTEEGDTVVVTTVRPGDFVVCNLASLSLGRIAVEDDAELREVTRSAVRALDNV
IDLNFYALPYARVTNHRYRSVGLGVSGYHHMLAKRKIRWESEEHLQFSDEVFERINRFAI
EASSDLAAERGSYDRFEGSDWQTGAYFDKRGYAGGAWEEVRAKVARQGMRNAYLLSVAPT
SSTSILAGTSAGLDPIMRRFFLEEKKGMMLPRIAPELSMETYWYYKPAHLIDQMWSIRAA
GVRQRHIDQAQSMNLYITNEFTMRQVFDLYASAWEAGVKTVYYVRSKSLEVGECESCSA
NT seq 2520 nt   +upstreamnt  +downstreamnt
atgcagatagtgaagagaagcggagcgttcgagcgctacgacggctcgaagatcgtttcg
gcgatggagaagtcgtttgcggcgacgtccgcctctgtgtccccggccgacctcgaacgg
atgctgggcctggtagagcgccgcatggaggagacctctgccaccacggtcgagcagatc
caggacctggttgaggaaaccctcatgagcgaggggcatttcgcccaggcgaaggcgtac
atcctgtaccgctcccgccgcagcgccctgcgccgcgatcgcgaggagatcgtccgccta
acgggcgctcccgagctcgattcggtgcttgcgctggtccagcgcgatttcgctgacgag
ttgtacggggtgtccgcgtggctcgcccggttccacgggttcgtcaagcccgacatggac
gtcgaccagcgcctcgacgccctgatccgcgccgcagtcgagctgaccacccaggaagct
cccctgtggagcaatatcgccgcgcgcgttctggcgttctccttccacggaaagaccgcc
cgcgcgatggcgcagcgcggggtggggagcttctacgacaaggttcggatgctcaccgac
ctgggcctgtacggctcctatattctggagaactacacgcgggacgagatcgatcgcgcc
gccgggcttatcgacgacgcgcgcgacgggctgttcgattacgcggggctcgatctcatg
ctgcgccgctacgtcatccgcacccacgaaggagaggccgtcgaaaccccgcaggagatg
tttctgggagtggctctccacctggccatgcgcgaggatcgtgcggtgcgcatggagtgg
gtcgagcgcttctacgacatgctgagcgagctgaaggtgacgatggccaccccgacgctg
tccaacgcgcgcaagccgcaccatcagctgtccagctgcttcatcgacaccgtgcccgat
tcgctggaggggatctaccgttcggtcgacaacttcgcacaggtgtcgaagttcggcggc
ggcatgggcatgtacctgggcaaagtgcgcgcgacaggcggttcgatccgcgggttcaaa
ggcgccgccggaggggtgatccgctggatccgcgtgatcaacgacacggcggttgccgtc
gatcagctgggcatgcgctcgggggccgtggccttgtacctggacgcctggcatcgcgac
ctgcccgagttcctgcagatccgcacgaacaacggcgacgagcgcatgaaggcccacgac
gtgtttcctgccgtgtgctatcccgacctgttctggaagctggccaagcaggatatgtcg
caggagtggcatctcatggatccgcacgagatcctcgtggtgaaagggtacgcgcttgag
gactacttcggggaggaatgggagcgccgctacctcgattgcgtggccgacccgcgcatc
tccaagcgcacgatgacggtgcgggacgtggtgaggctgatcatcaagtcggcggtcgag
acgggtgcgcccttcgcgttcatgcgcgacacggtgaaccgcgccaatcccaacccgcat
gccggtgtgatctactgttcgaacctgtgcaccgagatcgctcagaacacctcggcgatg
gagacggtttcgcgcgaggtggttaccgaagagggcgataccgtggtggttaccacggtg
cggccgggggatttcgtggtgtgcaacctggccagcctgtcgctgggccgcattgcggtc
gaagacgatgccgagctgcgcgaagtcacgcgttcggccgtgcgcgccctggacaacgtg
atcgacctgaacttctacgcgctgccgtacgcgcgcgtgaccaaccataggtaccgctcg
gtcggcctgggcgtgagcggctaccaccatatgctggccaagcgcaagatccgctgggaa
agcgaggagcacctgcagttttccgacgaggtgttcgagcgcatcaaccgcttcgccatc
gaggcttccagcgacctggccgccgagcggggaagctacgaccgcttcgagggttccgat
tggcagaccggtgcctacttcgacaagcgcgggtatgcgggaggcgcgtgggaggaggtt
cgggccaaggtcgctcggcaggggatgcgcaacgcctacctgctgtcggtggctcccacc
agctcgacgtcgattcttgcgggaacctcggcggggctcgaccccatcatgcgccgtttc
ttcctggaggagaagaaggggatgatgctgccgcgcatcgcccccgagctgtccatggaa
acgtactggtactacaagccggcccacctgatcgatcagatgtggtccatccgcgcagcc
ggcgtgcgccagcgccatatcgaccaggcgcagtcgatgaacctctacatcaccaacgag
ttcaccatgcgccaggtgttcgacctgtacgcgagcgcatgggaggccggggtgaaaacc
gtttactacgtgcggtcgaaatcgctcgaggtcggcgaatgcgagagctgctcggcgtag

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