Cryptococcus bacillisporus: 91981072
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Entry
91981072 CDS
T11001
Symbol
I312_101024
Name
(RefSeq) pre-mRNA-splicing factor CLF1
KO
K12869
crooked neck
Organism
cbas Cryptococcus bacillisporus
Pathway
cbas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91981072 (I312_101024)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbas03041
]
91981072 (I312_101024)
03036 Chromosome and associated proteins [BR:
cbas03036
]
91981072 (I312_101024)
Spliceosome [BR:
cbas03041
]
Complex B
Other components
Prp19-related factors
91981072 (I312_101024)
Complex C
91981072 (I312_101024)
Chromosome and associated proteins [BR:
cbas03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
91981072 (I312_101024)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
HAT
Suf
TPR_19
TPR_2
TPR_17
NRDE-2
TPR_12
Mad3_BUB1_I
TPR_16
SNAP
TPR_CcmH_CycH
FAT
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
91981072
NCBI-ProteinID:
XP_066604987
LinkDB
All DBs
Position
2:complement(join(479759..480496,480552..480731,480783..480898,480950..481201,481249..481281,481327..481756,481805..481900,481953..482059,482117..482279,482332..482397))
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AA seq
726 aa
AA seq
DB search
MAGRDPRDRAPRVRNRAPAAVQITAEQLLREAQERQEPAIQAPKQRVQDLEELSEFQARK
RTEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMEL
KARNINHARNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQ
SYIKLEERYNELDRASAIYERWIACRPIPKNWVTWAKFEEDRGQPDKAREVFQTALEFFG
DEEEQVEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHG
DRSGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGENVEPTRVREV
YERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRVRDVYKAAVKLVPHKAFTFA
KLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKPKLFTGYIELEMRLREFDRVRTLYEKFL
TYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERER
ARNLYERLLERTSHVKVWISYALMEIATLGGGEDEDGNEIEGEAGDADLARQVFERGYKD
LRAKGEKEDRAVLLESWKSFEQEHGDEGTLAKVEDMLPTTRKRWRKAEDGSGELEEYWDL
VFPDDEREANPTSFKFFQAAQAWAQQRAGQGEEGGLSYDLPSDSEGENEDEDEGEDHREE
EGMDQD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaagagatccaagagaccgtgctccaagagtgcgcaacagagcaccggctgcc
gtacagattacagcagagcagctcttgagggaagcacaagaacgacaagagcctgcgatc
caagcacccaaacagcgtgttcaggatttggaggagctttcagagtttcaggcgaggaaa
agaaccgagttcgagtcaaggatcagatactcaagggacagtatactggcgtggaccaaa
tatgcccaatgggaagccagccagaatgagtacgagcgatcaagatcagtgtttgaacga
gcgttggatgttgatcccagatcagtggacctctggattaagtacaccgacatggagctt
aaagctcgaaacataaaccacgctcggaatctttttgacagagctatcacccttcttccc
cgtgttgacgcactttggtacaaatatgtttatcttgaagaactccttctcaatgtttca
ggtgctcgtcaaatcttcgagaggtggatgcagtgggagcccaatgacaaggcttggcaa
agctacatcaagcttgaagaacgttataatgagctggatcgggcttccgccatttacgag
cgctggattgcctgccgcccgattcccaagaactgggtgacttgggccaagtttgaagag
gataggggccagccagacaaggctcgggaggtttttcagacggctttggagttcttcggt
gacgaggaggagcaggtcgagaaagcccagtcggtattcgccgcgttcgcaaggatggaa
accagattgaaggaatttgaaagggcgagagtgatttacaagtttgccttggcaagattg
cctagatcaaagtctgcgagcttatatgcccagtataccaaattcgagaagcaacatggt
gatcgttctggtgttgaactcaccgttctgggcaaacggcgcattcagtacgaggaagaa
ctggcttatgatcctacaaattatgatgcgtggttttctcttgctagattagaggaggat
gcctatcgagcggacagagaagacggcgaaaacgtcgagccaacgcgggttcgagaagtg
tatgagagggctgtggctaatgtcccccctgcgttggaaaaaagatactggagaagatat
atttacttatggttgcaatatgccgcatttgaggagatcgacacaaaggattacgaccgg
gtgcgggatgtctataaagcagccgttaagctcgttccgcataaagccttcacttttgcc
aagctttggttggcctatgcttacttcgaaattcgtcggcttgatgtctcagcggcccgt
aaagttctcggtgctggtatcggcatgtgccccaaaccgaagctcttcacaggctatatt
gagttggagatgcggctacgagagtttgatagggttcgaacgttgtacgagaagttcttg
acttatgacccttccctcagttctgcctggatacaatggactcaagtcgaatctgccgtc
gaggatttcgaacgtgttcgggcaattttcgaactcgctgtgcaacaatctctggatatg
cccgaaatcgtctggaaagcatacattgacttcgaggctggcgagggtgaacgcgaacgt
gctcgtaatttgtacgagcgcttgctcgaacgtacctctcacgtcaaagtctggatttca
tacgcactcatggagattgcgacgcttggtgggggagaggatgaagacggcaatgagatt
gaaggcgaggctggggacgctgacttggcgaggcaagtgtttgaaagaggttataaggat
ttgcgagcgaagggtgaaaaggaggatagggccgtattactcgaatcttggaagagtttc
gaacaggaacatggcgacgaagggacgttggccaaggtagaggatatgttacccacaact
cgaaagagatggaggaaggcagaggacgggagtggagagttggaggaatactgggactta
gtatttcctgacgacgaaagggaagcgaacccgaccagtttcaagttcttccaggctgcc
caagcttgggcgcaacagcgtgctgggcagggagaagaaggcggtttatcatacgatttg
ccgtcagattcagagggtgaaaacgaggacgaagacgagggcgaggaccatagggaagaa
gagggaatggaccaggattaa
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integrated database retrieval system
