Cryptococcus bacillisporus: 91982283
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Entry
91982283 CDS
T11001
Symbol
I312_102235
Name
(RefSeq) uncharacterized protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cbas Cryptococcus bacillisporus
Pathway
cbas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
91982283 (I312_102235)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbas03019
]
91982283 (I312_102235)
Messenger RNA biogenesis [BR:
cbas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
91982283 (I312_102235)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
91982283 (I312_102235)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
ARM_Cnot1
CNOT1_HEAT
NOT1_connector
Acetyltransf_11
Motif
Other DBs
NCBI-GeneID:
91982283
NCBI-ProteinID:
XP_066606188
LinkDB
All DBs
Position
3:complement(join(1551321..1551652,1551705..1553259,1553308..1556226,1556293..1556502,1556558..1557097,1557154..1558125,1558200..1558469))
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AA seq
2265 aa
AA seq
DB search
MSIPPPGLGGGVSRTGPPPGFGGGAAHSPVSDASATTMASSAGVAGGVGGGAVRRDGQGG
TAVIVRAQIVFLLTTFTEDSFEKASTEIRTLASTNGPEMYHHFLRRAVVVANPIIQTLIQ
HSNQYKDDPAAPPPQIPTTGQAALVWRLLVTEAARAARDVQLAPHFSFIMLSSSPSTPLP
LPSLRLFNLPPALLFSLSAYTLASPHVFPQNHASYPVFHAILAQTFQPTMELLRSPGVPF
WMMNVPGREPFTDDLTLQEARTLILALFPRAQSPTSGTASRPATPTNPTSPHSSPLNSLQ
RATLLTSLTVKFSSPAIILQTLSALSPGGPPRSPGSIPLEDILFELGESLTQDEGTVEAV
VQRWWMSWLFEGSPEDVRRRVTEEACHVVHGLCEGLPLGRVVDLHGVIKGLSAIDAISWP
DVVKSFDTPMTIAAYPSSIPLLVSLICLPSQTPVPPMAGLLPAHLDAPMWENISSLLSVL
THLTSLAPDAMPIFTMPSGPPPSVYSRIVDPPPSEQVWSKAARQQARDLQGAGLWNTLGL
IQVLVHACALAEMDHHSDREREERADIGRRATEILEKAAKLAPELVLIALEKLPKPLPSP
VVVQQTRLLAIYLSTKPSDITSSALVFHQMWEINPENLLSVLLEFYGEDENNLGRIVEIG
SELKDNLHFVLDVAALASNRELLNLERWLADGIEVKGEEFLEGIFDFVEHKIRLEFEHQH
QPENAPPLLFTLGPTVYSIFIRVVRNAPNLAREDIVRFKNLRTDILILHPRLLNLRPHSK
QEQGFSEAKFSKDVVEKVDEIYQRMYSGQLKLDDVVEELKAFQKSDDSKEQDIFAHALHS
LFDEYKFVKSYPPKELTMTGLLFGAIIDYRLVKDTPAFVATRYVLDACKTPPHEPLYQFG
ITALSVLRNSLVDFPGLCRSLLEIPALHESHPVLINDIQQALIEREELDLQGGVKLAFPA
LKLPVLIEEGDDEFREPETAKKDAIMFHVNQIAPTNYEDKAKALLELFEDQYSRWFAHYF
IDVRVSLEQNRHEIYLQLLQKLGSPLLDRHILWETYRKARELLNSEATINSASERAILKT
VAMWLGRITLAQNKPIRMKELSVKDILIQGYDTKRLIVAIPFVCNLLASCRDSAVFHPPN
PWLVAILRLLSEFYHFGELRLNMKFEIEVLFSKLGIELDSFEPSNLLRMHVPPPPAQPEI
PNRLDLELQRATTELVNGSQRLGDLPGNEAYARIQQLQTEQAVQAAQDALARRVDELIAQ
LPEYLVFNQDYPIFTAPTLKRIVHHSIDRAIREIITPVIERSVTIAGISSRDLIQKDFGT
EPDAIKMRQAAHMMVQNLAGSLALVTCKEPLRSSMIANVKSMLEQNGYTDETMPDAMIAG
VVNQNLDVACAVLKKAAMEKAAKDIDVNLAPQYAARKAHQSSRSTAPFWDGASFGVAISH
TALPDPLKLRPGGLTPQQFRVYEDFGEPTRMLSSHPAANGDYLSASYQNLTLNDGLVPAE
IKTGPSTRHGFVQDVAEAPEVVASPHAIPPQTSIDKFHEVAAEIQKIVSQTPVPSISTLP
ADHELRDLIRAIVIIANQSVHRENTTLAIAQKVVQLLYRSTVQLGREVYVYLLQQLCDLS
AKVDKEVKQWLIYAEDVRKLNVPVTVTLLRAQSIGVQELDVALSHIVIRSYPSEILDFVT
QLIRECSVSDIAFLPRQAFSHSLASLLKAQEAGHATAQVDSLLEELRGPREPQSSIEGDR
SKTVIDSKLQERLAHYFLEWVRVCSSSKDPEVPFVPYITFLQKEGILSGEDVSSAFYRTA
INTAVDLDTAKLNPDGSSRFYGVDALAKLILLIVKNYGDKSGASSVGRAVYYYNKIITIM
SYSLVQRQLAMGDAFNQRPWARFFTSMLSELATIEYNLPETYIGCLKHLANNLGITQPTY
APRFAFGWVSIISHRLFMPKLLSTQRDEGWPEFHRCVMWLLRFLAPFLQSDDMTPSSRSI
FRATIRLLMLLLHDFPEFLVEFYHTLSTVIPPHCTQMRNIVLSAFPHSEAPLPDYYKRLD
QLVVEMQRFPTVRSDYVGALADGNVKAAIDQYVRTGVPTLPSIVAELKNRIAVKSLGPQG
STAVTWNHTLMHASVFYLGTTAVARTFQQTGVVSFDPKAPEVAVLAGLAHAFDGEGQYYM
LNVVADQLRYPSAHTLFFIHFMLFLFGTSVQPELSSTIPERIARILLERTIVKRPHPWGL
LVTFIELLDNEAYGFWKQPFVRAQDEVFRLFGQVRQSVAARRELQ
NT seq
6798 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatccctcctcccggcctgggaggcggggtcagcagaacaggaccacctccggga
tttggtggtggtgcggcccattccccagttagcgatgcgagtgcgaccactatggcaagc
agtgccggcgttgcgggaggtgttggcggtggtgctgttagaagagacggtcagggcggg
actgcggtgatcgtcagagcacagattgtattcttgttaacaacatttacggaagatagc
tttgaaaaggcctcaactgagatcagaacgcttgcgtctaccaatgggccggaaatgtac
caccactttttacggcgagcggtcgtggttgcaaacccaattatccagactttaatccaa
cattccaaccaatacaaggatgaccctgccgcgccgcctcctcagattcctaccacgggt
caagctgcgcttgtttggagattgctggttactgaagcagctagagcggctagggatgtg
cagctcgcgccccatttctcctttatcatgctttcctcctccccatcaactcctcttcct
ttgccctccctacgattgtttaacctccctcctgcgcttcttttctcactctcggcatac
acactcgcgtcaccccacgtttttccgcaaaaccacgcgtcttatcccgttttccatgcc
atcctcgcacagaccttccaacctacgatggagcttctacgatcgccaggtgttccattc
tggatgatgaacgttcctggaagagagccctttaccgacgatttaactttgcaggaagcc
aggactttgatcctcgcactcttcccgagggcccagagccctactagcggcaccgcttct
cgacctgctacgcctaccaacccgacttcgccacattcttctcctctcaactctcttcaa
cgtgcgacccttctcacttctctcactgtcaagttttcgtctcccgctatcatccttcaa
actttatccgcgttgtctccaggtggaccgccccggtctccaggcagcattccccttgaa
gacattttattcgagctgggtgaaagccttacccaagacgagggcactgttgaggctgtt
gtgcagagatggtggatgtcttggttgtttgagggctcgccagaagatgtcaggcgaaga
gtcactgaagaagcgtgtcatgtggtccatggtctgtgtgagggattgcccttgggacgt
gtcgtagacctgcatggcgtgatcaaaggattgtcggcgatcgatgctatctcctggccc
gacgtggtcaagtcatttgacaccccgatgaccattgcggcatatccttcatctattccc
ctcctcgtttccctcatatgtcttccatcgcagacgccagttccaccaatggctggtctg
ttgccagcacaccttgacgctccgatgtgggaaaacatttcttcacttctctctgtgtta
acgcaccttacgagccttgcgcccgacgcgatgcccatcttcactatgccatccggccct
ccaccttcagtctactctcgtatcgtcgatcctccaccttccgagcaagtgtggagcaag
gcggctcgtcagcaggcgagggatttacagggcgctggattgtggaatactttgggttta
atccaagtactggtgcatgcgtgtgctttggcagagatggaccatcattcagacagagaa
cgggaagagagggcggatattggcaggagagctacagaaattttggagaaggcggccaaa
ttggcgccagagttggttttgattgccctagagaagcttccaaaacctcttccctcacct
gtggtcgttcaacagactcgtctgttggcgatttacttgtcaactaaacctagcgatatc
acttcatccgccttagtatttcatcagatgtgggaaataaaccctgagaacctcttatcg
gtcttgttagagttctatggggaagacgagaacaatttgggaagaattgtggagatcggc
tcagaattgaaagataaccttcactttgtcctcgatgtggctgctttggcatccaacaga
gagttgctcaacttggagcgctggttggcggatgggatagaagttaagggagaagagttc
ctcgagggtatctttgactttgttgagcacaagatccgtctcgagtttgagcatcagcac
cagcctgaaaacgcgcctcctctgttgttcaccctcggtcccactgtctattctatcttc
atccgtgtggttcgcaatgcccccaacctcgctcgtgaagacattgttcgtttcaaaaac
cttcgtacggatatactcatccttcaccctcgtcttctcaatctccgaccccatagcaag
caggagcaaggcttctctgaagctaaattctcgaaggacgttgttgaaaaggtggacgaa
atctatcagcgaatgtacagtggacagctcaagttggatgacgtggtggaggagctcaaa
gctttccaaaagtctgatgacagcaaggaacaagatatctttgcgcacgcacttcactca
ctctttgacgagtacaagtttgtcaagtcgtatcctcccaaggaattgactatgactggt
cttctcttcggtgccatcattgactatcgacttgtcaaggacaccccggcgtttgtggcg
acacgatacgtcttggatgcttgcaagactcctccccatgagcccttgtaccaatttggt
atcaccgctttgagtgtgctccgtaattcgcttgttgacttccccggtctctgtcgatct
ctcttagagattcctgctcttcatgagtcccatcctgttttaatcaatgacatccagcaa
gcattgatcgagagggaagagttggaccttcaaggcggtgtcaagttggctttccctgct
ctcaaattgcctgtgcttattgaagagggagatgacgagtttagagagccagaaactgcg
aagaaagacgccatcatgttccacgtcaaccagatcgctcccaccaactacgaggataag
gctaaggctttgctcgaactattcgaagaccagtattcccgttggttcgcccactatttc
atcgacgtccgagtcagtcttgagcagaataggcatgagatctacttgcaattgcttcaa
aagctcggctcacctctccttgatcgacacatcctctgggaaacgtacaggaaagcaaga
gagttgctcaactcggaggcaacaatcaactctgcttcagagcgtgcgatactcaagacg
gtagccatgtggttgggccgtatcactcttgctcagaacaagccaatcaggatgaaagaa
ctctccgtaaaggatatcttaatccaaggttatgacaccaaacgacttatcgtcgccatc
cccttcgtctgtaatttactcgcctcttgcagagactcggctgtcttccacccgcccaac
ccttggttggttgctatccttagacttctttctgagttttaccactttggtgagcttaga
ctcaacatgaagtttgagatcgaagttcttttcagcaagctcggtatcgaacttgactcc
ttcgagccatccaatctcctgcgcatgcatgttccgccacctcccgctcagcccgagatc
cccaaccgactcgacctcgagcttcaacgtgccacaaccgaacttgtgaatggttctcaa
cgacttggagacttgccaggcaacgaggcgtatgctcgcatccagcaattgcaaactgag
caagctgtacaagccgctcaggatgcgttggcacgtcgcgtcgacgagcttattgctcaa
cttcccgagtacctcgtcttcaaccaagattaccccatctttaccgctccaaccctcaag
cgtattgtgcaccactcaatcgaccgagccattcgcgagatcattactcctgttatcgag
cgttctgtcaccatcgccggcatctcttctcgcgatttgattcaaaaagactttggcacc
gagcctgatgccattaaaatgcgccaagctgctcacatgatggtgcagaaccttgccggt
agcttggccctggtgacatgcaaagagccattgcgttctagcatgattgccaatgtcaag
tctatgctcgaacagaatggctacacggatgagaccatgccggatgcgatgattgcgggt
gtagtaaatcagaacttggatgttgcgtgtgcggtgttgaagaaagcggccatggagaaa
gcagccaaggatattgatgtcaatcttgcacctcaatatgcagcgcggaaggcccaccag
agttcgaggtctactgctcctttctgggacggtgcttctttcggtgttgccatctctcac
actgctcttcccgaccctctcaagcttcgtcctggtggtcttaccccgcagcagttcagg
gtctatgaagactttggcgagcctacaaggatgctgtcctctcaccctgctgccaacggc
gattatctatccgccagctatcaaaaccttactctcaacgacgggctcgttcctgcggaa
atcaagactggcccttcgactcgtcacggctttgttcaagacgttgctgaggctcccgaa
gttgttgcatcgccccatgctatcccacctcagacaagcattgacaaattccacgaagtt
gcggctgagatacagaagatcgtctctcagacccctgtacctagcatttcgacccttccg
gccgaccatgagctgcgggatcttattcgagccatcgtcattatagcgaaccaatctgtg
cacagggagaacacgactttggcgattgcccaaaaagttgtgcaactattgtacaggtcc
acggtacagttgggtagggaagtatatgtgtacttgttgcagcagctgtgcgatttgtcg
gcgaaggtggacaaggaagtgaagcagtggttgatttatgcggaggatgtgaggaaactg
aatgtccctgtcactgtaactcttcttcgcgctcagtccattggcgtgcaagagcttgat
gtcgccctttcccacatcgtcatccgatcctatccttccgaaatcctcgacttcgtcact
caactcattcgtgaatgctcggtgtctgatatcgcattccttccccggcaggccttctct
catagtctggcttcgctcctcaaggctcaggaagctggtcatgctactgctcaagttgac
tcattactcgaggagcttcgtggcccacgagagcctcagagtagcatcgagggtgaccgg
tccaagactgtcattgacagcaagcttcaggagaggttggcacactacttcttggagtgg
gtccgggtctgcagctctagcaaggatcccgaagttccatttgtgccctacattactttc
ttgcaaaaggagggtatcctcagcggtgaggatgtctcatctgcattttaccgtactgct
atcaatactgccgtcgatctcgacactgctaagcttaaccccgatggctcgtcaaggttc
tatggcgtggatgcattggccaaactcattctactcatcgttaaaaactacggtgacaag
agcggagccagcagtgttggcagagctgtctactattacaacaagatcattacgatcatg
tcgtactccctcgtgcaaaggcaacttgccatgggtgatgctttcaaccagcgaccttgg
gccagattctttacaagtatgttgagcgaattggccactattgagtataaccttcctgag
acatatatcggctgcttgaagcaccttgccaacaatctcggcattactcagcccacctac
gcccctcgctttgcgttcggttgggtctcaatcatttcccaccgtcttttcatgcctaaa
ctgctctccacccagagggacgaagggtggcccgagttccaccgatgtgtcatgtggctc
cttcgcttccttgcgcccttccttcaatcagatgacatgactccctcgtcaaggtcaatc
ttcagagccactattcgacttctcatgcttcttttgcatgacttccccgagttcctcgtt
gagttctaccatactctctcgaccgtcattcctccccactgcactcaaatgcgaaacatc
gtcctttctgctttccctcattccgaggctccccttcccgattactacaagcggcttgat
cagcttgttgtggagatgcaacgattccccaccgttcgctcagactacgttggcgcgttg
gccgatggcaacgtcaaggccgctatcgaccagtatgtccgaactggcgtccctactctt
ccttcaattgtggcggagctcaagaacaggatcgcggtcaagtctttaggtcctcaaggc
agcacagctgtcacatggaaccacacattaatgcacgcgtcagtcttctatcttggtact
actgcggttgccaggaccttccagcaaacaggtgttgtgagctttgacccgaaggctcct
gaggtggccgtgttggctggtttggcacatgcgtttgacggcgaaggccaatactatatg
ctcaacgtggttgctgaccagcttcgatacccatccgctcatacccttttcttcatccat
ttcatgctcttccttttcggtaccagcgtgcaacccgagctttcatctaccattcccgag
cgtatcgctcgtatccttctcgaacgaaccatcgtcaaacgccctcatccttggggtcta
cttgtcactttcatcgagttgctcgacaatgaggcttatgggttctggaaacagccattt
gtcagggcgcaagatgaggtgtttaggctcttcggccaggtgcgacagtctgtcgcggcg
cgtagggaattgcagtag
DBGET
integrated database retrieval system