KEGG   Cryptococcus bacillisporus: 91985427
Entry
91985427          CDS       T11001                                 
Symbol
I312_105382
Name
(RefSeq) pre-mRNA-splicing factor CEF1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
cbas  Cryptococcus bacillisporus
Pathway
cbas03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbas00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    91985427 (I312_105382)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cbas03041]
    91985427 (I312_105382)
   03400 DNA repair and recombination proteins [BR:cbas03400]
    91985427 (I312_105382)
Spliceosome [BR:cbas03041]
 Complex B
  Other components
   Prp19 complex
    91985427 (I312_105382)
 Complex C
   Prp19-CDC5 complex
    91985427 (I312_105382)
DNA repair and recombination proteins [BR:cbas03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    91985427 (I312_105382)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 91985427
NCBI-ProteinID: XP_066609276
LinkDB
Position
9:complement(join(544297..544392,544444..545756,545809..546444,546498..546777,546828..546935,546986..547066,547121..547123))
AA seq 838 aa
MRVIVKGGVWRNTEDEILKAAISKYGKNQWARISSLLVRKTPKQCKARWYEWLDPSIKKV
EWSKTEDEKLLHLAKLMPTQWRTIAPIVGRTATQCLERYQKLLDDAEARDNEELGLGAGE
DESSKPAADARGLRPGEIDTDPETRPARPDPIDMDDDEKEMLSEARARLANTQGKKAKRK
ARERQLEEARRLAFLQKKRELKAAGINLRAKPKKKGMDYNADIPFEKQPAPGFYDVKEEQ
AKVYAAPVGSTLRALEGKRKQELDEIEERKKRQKKGDGKSNQTQQFVAAREAQIKKLKEQ
EQIIRRRKLNLPMPQVGERELEDIVKIGQAGELARELVGDGNKATEGLLGEYEALGQAKM
ARTPRTAPQQDNVMAEARNLRNMMAAQTPLLGEENTPLHGPSAGTGFEGATPRHDVAATP
NPLAISARGGVLTSSRTVPGVGATSLRTPFRDDLSINDDASVYSETPMNEKRRLAVSRRA
LKAGFAALPKPENNFELAETEEDEEEAEEAEPLTEEDAAERDARLKAAREEEERRELERR
STVIKKGLPRPVNVNTYKLLEDLNSAVVEQIDEEMAAAFKLVNLEVAMLMKHDSIVHPMP
GTSTPGGQASEYDMPEDDFVAEAKNAIHTELANALGLPGASDEHLRLAIGAAAEENEAAF
AEAWAKEREGLVYSPSTQMWVDKTSLSPEELSACYAAMINASRDRVIAEATKAAKAEKKL
GKQLGGYQTLNEKVKKAIANVMEEIHQTKRDMETFLMLKGIEEAAAPARLEKIREEVAVL
ERRERDLQARYAELNDRRRENLAAIEQLEEDKLVLAAQAALEAQEGEVADGDIDMNGA
NT seq 2517 nt   +upstreamnt  +downstreamnt
atgcgggttattgtcaagggcggcgtttggagaaacaccgaagatgaaattctcaaggcc
gctatctcaaaatacggtaagaatcaatgggctcgtatctcatcacttttggttcggaaa
acacccaagcaatgtaaagcgagatggtacgaatggttagacccttcaatcaagaaagtg
gaatggtcgaagaccgaggacgaaaagcttctccatcttgccaagctcatgcctacccaa
tggagaaccattgctcctatcgtcggtcgcactgctacacaatgtcttgagcgataccag
aaacttctggatgatgcggaggcgagggacaatgaagagctgggattaggagcaggagag
gatgaatcgagcaaaccagctgccgatgctagaggtctcaggccgggagaaattgacaca
gaccccgagacaagaccagcgaggcctgatcccatcgacatggatgatgacgagaaggaa
atgttatcagaagcgcgagcgagattggccaatacacaaggcaagaaagccaagcgcaag
gcccgagaaaggcaattggaagaggccaggcgactagctttcttacaaaagaagcgcgaa
ttgaaagccgctggcattaatcttcgtgccaagccgaagaagaagggtatggattacaac
gccgacataccttttgagaagcagcctgctcctggtttctacgatgtcaaggaagaacaa
gctaaggtttacgctgctcctgtcggttcaacacttcgggccctcgagggaaaacgcaag
caggagctggacgagattgaagagaggaagaagcgacagaagaagggagacggcaagtct
aaccaaacacagcagtttgtggcggcccgagaagcgcagatcaaaaaactcaaggagcaa
gaacagattatcaggaggaggaagctaaatttgccgatgcctcaggttggagaacgagaa
ctggaagatattgtcaagatcggacaagcaggagaattagcgagggagttggttggtgac
ggcaacaaggcgacagagggtttgctaggcgagtacgaagctttgggccaggccaagatg
gctaggacaccaagaacagctcctcaacaggataatgtcatggccgaggctcgaaatctc
cgaaatatgatggcagcacaaacacctcttttgggagaagagaacactcctctgcacggc
ccttctgcaggcactggattcgaaggggctacacctcgacacgatgttgccgctaccccc
aatcctcttgcaatttctgctcgaggtggtgtgctcacttcaagtcgaacagttcctggt
gttggtgccacctccctacgaactcctttccgagatgatttgagcatcaacgacgatgcc
tccgtgtacagtgaaactcccatgaacgagaagcgacgccttgccgtttctcgtcgagct
ttgaaggctggctttgctgccttgcccaaacccgaaaataactttgagctcgctgagaca
gaagaggatgaagaggaggccgaagaagcggaacctctaacagaggaagatgctgcagag
agggatgcgagattgaaggctgccagagaggaagaggagcgacgcgaacttgagaggaga
agtactgttataaagaagggtttgcctcgacccgtcaatgtcaacacatacaagcttctc
gaggatctcaactcggctgtggttgagcagatcgacgaggaaatggctgcagcgttcaag
ctcgtcaatcttgaagttgcaatgctcatgaagcacgactccatcgttcaccccatgcct
ggaacttccacccctggtggtcaggcttctgagtatgatatgccggaggacgacttcgtg
gccgaggccaagaacgctattcatacagaattggccaacgcattgggcttaccgggtgcg
agcgatgaacatttacgtttggcgattggcgcagccgccgaggaaaacgaagctgccttt
gcggaggcatgggccaaggaacgtgaaggtcttgtctactccccttcaactcaaatgtgg
gtcgacaaaacctctctttctccagaggagctatctgcatgctacgctgcaatgatcaac
gcttctcgggaccgcgttattgccgaggctaccaaagccgccaaagcagaaaagaagctc
ggtaaacaactgggtggttaccaaacactcaatgagaaggtaaagaaggccattgcgaac
gttatggaggagattcaccagaccaaacgggatatggagacattccttatgcttaaaggc
atagaggaggccgcggccccggcgagactggagaaaattagagaggaggttgctgttttg
gagagaagagagagagatctgcaggctagatacgcggagttgaacgacaggaggagggaa
aaccttgcagctattgaacagcttgaggaagacaagctcgttctcgctgctcaagcggcg
ctggaggcccaagaaggagaggtcgcggatggtgatattgatatgaacggggcgtag

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