Cellulophaga baltica 18: M666_10590
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Entry
M666_10590 CDS
T03565
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cbat
Cellulophaga baltica 18
Pathway
cbat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M666_10590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbat03019
]
M666_10590
03400 DNA repair and recombination proteins [BR:
cbat03400
]
M666_10590
Enzymes [BR:
cbat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M666_10590
Messenger RNA biogenesis [BR:
cbat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M666_10590
DNA repair and recombination proteins [BR:
cbat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M666_10590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
DUF7897
HHH
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AIZ41991
UniProt:
A0AAU8RFN4
LinkDB
All DBs
Position
2505203..2507404
Genome browser
AA seq
733 aa
AA seq
DB search
MSLSEIDLHSSLKKYFGFSQFKGLQESVITSILEGKNCFVVMPTGGGKSLCYQLPALMQE
GTAIVVSPLIALMKNQVDAIRGVSSEHGIAHVLNSSLTKTEIKQVKSDITSGVTKLLYVA
PESLTKDEYVEFLQSVKISFVAVDEAHCISEWGHDFRPEYRNLKSIISRLDDTIPIIGLT
ATATPKVQEDIIKNLGITDADLFKASFNRPNLFYEVRPKTQNIEADIIRFVKQNSGKSGV
IYCLSRKKVEELAQVLQVNGVSAVPYHAGFDTKTRSKYQDMFLMEDVDVVVATIAFGMGI
DKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAEQ
EIGNALLQEMVAYAETSMSRRKFILHYFGEEFDDVNGDGALMDDNTKNPKDKEEAKDDLV
KVIQVVQGTMEKFKSKEIVKVLTGKVNAIIASHKTDEKPFFGIGKDRDKEHWMALVRQGL
VAGYLRKEIEQYGILHVTPKGAEYVKNPVSFMMTKDHVYNKAADDAIVSAAKTSAGVTDE
ALLKVLKDLRKKQGQKLGVPPFVIFQDPSLQDMALKYPVTLEELVNIHGVGEGKAKKYGK
PFVEFIKKYVEDNDVIRPDDLIVKSTGANSALKLYIIQNVDRKLPLDDIASAKGLSLPEL
LKEMEQIVYSGTKLNISYWIDDVLDEDQQEEIHDYYLEAESDNIDLALKEFDGDYEDEEL
RLYRIKFISEVAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgagtgaaattgatttgcattcctcactaaaaaaatactttggattttcacaa
tttaaaggacttcaggaaagtgttattacaagtattcttgaaggtaaaaattgttttgta
gtaatgccgacaggcggtggaaaatcgctttgttatcaactccctgctttgatgcaagaa
ggtactgcaattgtagtttccccgcttattgcgttaatgaaaaatcaagtagatgcgatt
cgtggtgtctcctcagagcacggtattgctcatgttttgaactcatcattgacaaaaaca
gaaataaaacaagtaaaaagtgatatcactagtggtgttaccaaactactttatgtggca
ccagaatcattaacgaaagatgaatatgttgagtttttacaatctgtaaaaatatcattc
gttgcggtagatgaagcacactgtatttcagaatggggtcatgattttagacctgaatat
cgaaatttaaaaagtataattagtcgcttagatgataccattccgattattggattaacc
gctacagcaactccaaaagtacaggaagatattataaaaaacttagggatcacagatgca
gatttgtttaaagcatccttcaatagacctaatttgttttatgaggtacgtcctaaaact
cagaatatagaagcagatattattcgctttgtaaaacaaaattcagggaaatctggagta
atttactgtttgagtagaaaaaaggtagaagaattagcgcaagtactccaagtaaatgga
gtgagtgctgtgccataccatgccggttttgatactaagacacgatctaaatatcaagat
atgttcttgatggaggatgtagatgtggtggtagcaaccattgcctttggtatggggata
gataagccagatgttaggtttgtgattcaccatgatattcctaaaagtatagaaagttat
taccaagaaacgggtagagcaggtagagatgggggcgaagggcattgtttggctttttac
tcgtataaggatatagaaaaattagaaaaatttatgtctggtaagcctgtggcagaacag
gaaattggaaatgccttgctgcaagaaatggtagcatatgcagaaacatctatgtcacgt
aggaaattcatccttcattattttggtgaggagtttgatgatgtaaatggcgatggagcc
cttatggatgataataccaaaaatccaaaggacaaagaagaagcaaaagatgatttggta
aaagtgattcaggtggtacaaggtaccatggagaagttcaaatctaaagaaatagtcaaa
gtacttacaggtaaagtcaatgctattattgcatcgcataaaaccgatgaaaagccattt
tttggtatcggaaaagatagagataaagaacattggatggcattagtgcgccaaggttta
gttgccggttacctacgaaaggagatagaacaatatggaattttgcatgtaactccgaaa
ggagcggaatatgtgaagaacccagtttcttttatgatgaccaaagatcatgtgtacaat
aaggcagcagatgatgctattgtaagtgccgctaagacgagtgctggcgttacagatgaa
gccttattaaaagtgttaaaagatcttagaaaaaaacaaggtcagaaattaggcgttcct
ccctttgtaatctttcaagatccttctttacaagatatggccctaaagtatcctgtgact
ttagaagagcttgtaaatattcatggggtaggagaaggtaaagctaaaaaatatggtaag
ccattcgtagaatttattaaaaagtacgtcgaggataatgatgttattcgtccagatgat
ttaatcgtaaaaagtaccggtgctaattcagctttaaaattatacatcatccagaatgta
gatcgtaaattacctttagatgatattgcatcagcaaagggcttaagtctgccagagcta
ttaaaagaaatggagcagattgtatatagcggtacgaagctaaatatttcctattggatt
gatgatgtcttagatgaagaccaacaagaagaaattcatgactattatttggaagcagaa
tcagataatatagatctagctttaaaagagtttgatggcgactatgaagacgaagaactt
cgattgtatcgtattaaatttattagcgaagtagctaattaa
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