Clostridium beijerinckii NCIMB 14988: LF65_00387 Help Entry LF65_00387        CDS       T04773                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism cbei  Clostridium beijerinckii NCIMB 14988 Pathway cbei03030   DNA replication cbei03410   Base excision repair cbei03420   Nucleotide excision repair cbei03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cbei00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     LF65_00387    03410 Base excision repair     LF65_00387    03420 Nucleotide excision repair     LF65_00387    03430 Mismatch repair     LF65_00387  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cbei03032]     LF65_00387    03400 DNA repair and recombination proteins [BR:cbei03400]     LF65_00387 Enzymes [BR:cbei01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      LF65_00387 DNA replication proteins [BR:cbei03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      LF65_00387 DNA repair and recombination proteins [BR:cbei03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      LF65_00387    NER (nucleotide excision repair)     GGR (global genome repair) factors      LF65_00387    MMR (mismatch excision repair)     DNA ligase      LF65_00387   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       LF65_00387 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 PTCB-BRCT DNA_pol_lambd_f HHH DNA_ligase_ZBD 5_3_exonuc BRCT_2 RNA_ligase PADR1_Zn_ribbon RNA_pol_A_CTD DUF669 P2_N Motif Other DBs NCBI-ProteinID:  AJG97055 UniProt:  A0A0B5Q7X3 LinkDB All DBs Position 394685..396676 Genome browser AA seq 663 aa AA seqDB search MDKIERIKELVEKLNRYSYEYYSLDSPSVSDKDYDEKYYELQELERETEYVLPYSPTLRV GDVVLEGFRKYTHKARLWSLDKAQSLQEIIDWHNRNVKFVEEARGRGENLPDLKYVVTKK FDGLTINLTYNTEGILEIAATRGTGSIGEEVTAQVKTIKSIPLKINSNDILEVHGEAIMT QEAFNKYNETSDTPLKNLRNGAAGALRNLNVKETARRNLSAFFYDVGYKEGTPFKTYMEM MEFIKQQGLPVDDYIRVCKSIEEIEKEIDYVRDIRFDLNYDIDGLVIAIDDIRTRELIGY TVKFPKWAIAFKFEAQEATTKLLDVEWNVGRSGRVGPTAILEPVELAGVTVKRATLNNMD DIARKGVRIGAEVFVRRSNDVIPEIMGIVPESLEGSEEISVPEVCPACGSHLVLNGAHYF CENTLSCKPQLVKTIVHYASREAMNIAGFSERTAEQLFEKLNIKSISDLYKLKEEDLIGL EKFAAKKAQNLLEAIEKSKDCELYAFIYALGIPNVGVKTAKDLVSRFESIEGLKNATFEE LVGVQDVGDVVAQGVLAFFKEEKVLQTIEELLSLGVSPKYEEKEVIASAFEGKTVVATGS LKNYSRTEIKDKLESLGAKVAGSVSKKTDYVIAGEAAGSKLTKAEELGIKILSEDEFEEM LRR NT seq 1992 nt NT seq  +upstreamnt  +downstreamnt atggataagattgaaagaataaaagaacttgttgaaaagttaaatagatattcatatgaa tattattctttagatagtccatctgtaagcgacaaggactatgatgaaaaatactacgaa cttcaagagctagaaagagaaacggaatatgtacttccttattcgcctacattaagagtt ggggatgtagtgctagaaggatttaggaagtatacacataaagcaaggctttggagctta gataaagcgcaaagtttgcaagaaattatagattggcataatagaaatgttaagtttgta gaagaggctaggggcagaggagaaaatctgcctgatctaaagtatgttgttacaaagaaa tttgatggattaacaattaacttaacatataatactgaaggtatacttgaaatagctgca acaagaggaacaggaagtattggtgaagaagttacagcacaggtcaaaacaataaaatca attccacttaaaattaatagcaatgatattttagaagttcatggagaagctattatgacg caagaagcgtttaataaatataatgagacttctgatacaccactaaagaacttaagaaat ggggctgcaggcgctttaagaaacttaaatgtaaaagaaactgcacgaaggaatctttcg gctttcttttatgatgtaggctataaagaaggaactccatttaagacttatatggaaatg atggagtttataaaacagcaagggctccctgttgatgattatataagggtatgtaagtct atagaagaaattgagaaagagatagattatgtaagagatattagatttgatttaaattat gatatagatggattagtaattgcaatagatgatattagaacaagagaattgataggatat acagtaaagttccctaaatgggcgattgcatttaaatttgaagcccaagaagcaacaact aaacttttagatgttgaatggaatgttggaagaagtggtagagttggtccaacagcaata ttagaaccagtggaacttgcaggcgttactgttaaaagagcgactttaaataatatggat gatattgcgagaaaaggtgttagaattggtgcagaagtatttgtaagaagaagtaacgat gttataccagagataatggggatagtaccagaatctttagaaggttcagaggaaatatca gttccagaagtttgtcctgcttgtggcagtcatttagtgttaaatggagctcattatttt tgtgaaaatactttatcttgtaagcctcaattagttaaaactatagttcattatgcttca agagaagcaatgaatatagctggtttttcagaaagaacagcggaacaactatttgaaaaa cttaatattaaatctatttctgatttgtataaactgaaagaagaggatttaataggatta gaaaagtttgcagctaagaaagcgcaaaatcttctggaagctatcgaaaaaagtaaagat tgtgagttatacgcatttatatatgccttaggaattccaaatgtaggagtaaagactgca aaagatttagttagcagatttgaatctatagaaggcttgaaaaatgcaacctttgaagaa ctcgttggagttcaggatgtcggagatgtagttgctcaaggggttttggcattctttaaa gaggaaaaggttttacaaacaattgaagaattattatctctaggtgtcagtcctaaatat gaagaaaaagaagtgatagcaagtgcttttgaaggaaagactgttgttgcaactggttca cttaaaaattattctagaactgagataaaagataaacttgaaagcttaggagcaaaggtt gcaggaagtgttagtaaaaaaacggattatgtaatagcaggggaagctgcaggatcaaaa ttaactaaagcagaggaactaggaatcaagatcctttcggaagatgagtttgaagaaatg ctaaggaggtag

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