Cercospora beticola: CB0940_01341
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Entry
CB0940_01341 CDS
T09388
Name
(RefSeq) Pre-mRNA-splicing factor clf1
KO
K12869
crooked neck
Organism
cbet
Cercospora beticola
Pathway
cbet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CB0940_01341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbet03041
]
CB0940_01341
03036 Chromosome and associated proteins [BR:
cbet03036
]
CB0940_01341
Spliceosome [BR:
cbet03041
]
Complex B
Other components
Prp19-related factors
CB0940_01341
Complex C
CB0940_01341
Chromosome and associated proteins [BR:
cbet03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
CB0940_01341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
TPR_19
Suf
HAT
TPR_2
TPR_17
TPR_16
TPR_CcmH_CycH
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
35425151
NCBI-ProteinID:
XP_023459222
LinkDB
All DBs
Position
1:complement(3440545..3442880)
Genome browser
AA seq
676 aa
AA seq
DB search
MDASRGPPRVKNKAPAPQQISAEQLLREAVDRQEPALTAPTQRFADLEELHEYQGRKRKE
FEDYVRRNRLNMGNWFRYAAWELEQKEYRRARSVFERALDCDATNVQLWLRYIEAEMKER
NINHARNLLDRAVTIQPRVDKLWYKYVYMEEMLGNVAGTRAVFERWMSWEPDEAAWTAYI
KLETRYGEYDRARNVFERFTIVHPEPRNWIRWARFEEANGTSDLVREVFGMAIETLGDEF
MDEKLFIAYAKFEAKLKEFERARAIYKYALDRMPRSKSAVLHKSYTTFEKQFGDREGVED
VVLSKRRVLYEEQVKENPKNYDAWFDYARLEEAGGDSDRVRDVYERAIAQLPPSHEKRHW
RRYIYLWLFYAIYEELTTKDLERAQQVYDEALKIVPHKKFTFAKLWMLKAQFHLRRHELD
RARKTMGMAIGLCPKNKLFRAYIEMELKLFEFVRCRTLYEKWIEFDASNSQAWIKFSELE
RGLEDLERARAIYELAIQQEQLDMPELVWKAYIDFEEEEGEFEKTRKLYERLLQKTQHVK
VWISYAHFEINVPDAADQISTETEDAPVSDAAKARARKVFERAHKMYKDQQLTDERVSLL
NAWKSFEDTHGSSENIESVAKVLPRKVKKRRKLEDGSFEEYMDYVFPADDQSSAKMSKLM
MAAQQWKQQQASESNS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctcgcgtggcccaccgcgggtcaagaacaaggcgcctgcgccccagcagatc
tctgctgagcagctgctgcgcgaggctgtcgaccgccaggaacccgcgctcacagcaccg
acgcagcgcttcgcggatctcgaggaacttcatgagtatcagggccgcaagcgaaaggag
ttcgaagactatgtccgacgcaatcggcttaatatgggcaattggttccgatatgccgcc
tgggaactggagcagaaggaataccgacgtgctcgctctgtctttgagagagcactggat
tgcgatgcgaccaacgtgcagctatggctgaggtacatcgaggcggagatgaaggagcgg
aatatcaaccatgccaggaatttgctcgatcgtgctgtgacaattcaaccgcgtgttgat
aagctgtggtacaaatatgtttacatggaggagatgctgggcaacgtggctggtacacgt
gccgtctttgagcgatggatgagctgggaaccggacgaggctgcgtggactgcttacatc
aagctcgaaacacgatatggcgaatacgatcgtgcgcgaaatgtatttgagcgctttacg
attgtgcatcccgaaccgaggaactggatcagatgggcccgctttgaggaggctaacggc
acgagtgatctggtgagagaggtatttggcatggctattgaaacactgggcgacgaattc
atggacgagaagttgttcatcgcatatgcaaaattcgaggccaagctgaaagagtttgaa
cgcgctcgagccatctacaaatacgccctggatcgcatgccacgttcgaagtctgccgtg
ctgcacaaatcctacaccacttttgagaagcaattcggcgatcgtgagggagttgaggat
gtcgtgctatcaaagcgtcgcgtcctctacgaggagcaggtgaaggagaacccaaagaat
tacgacgcatggttcgattacgcccgtctcgaagaagctggcggcgactccgaccgagtc
agagatgtctacgagcgcgcaattgctcagctgccgccgtcacacgagaagcgacactgg
cggagatacatatatctctggctgttttatgccatttatgaagagctaacgaccaaagat
cttgagcgagcccaacaggtctacgacgaagcgctcaagattgttccccacaagaagttc
acgttcgccaagttgtggatgttgaaggcacaattccatctgcgcagacacgagctcgac
agggcgagaaaaactatgggaatggctattggactgtgtcccaagaacaaactattccga
gcttacatcgaaatggagctgaagctcttcgagttcgtgcggtgccgtacactgtacgag
aaatggattgaatttgacgcgagtaactctcaagcctggatcaaattctccgagttggaa
agaggactcgaggatctggagcgcgcgcgggcgatctacgagctggccatccagcaggaa
caattggatatgccagagctcgtatggaaagcctacatcgatttcgaggaggaagaagga
gaatttgaaaagacacggaaactttacgagcgcctcctccagaagacacaacatgtcaaa
gtctggatctcatacgcgcacttcgagatcaatgttcccgatgctgctgatcagatttcc
accgaaacagaggacgcaccagtatctgatgccgcaaaggcgagggcgagaaaggtgttt
gagagggcgcacaaaatgtacaaagatcagcagctcactgacgagcgcgtttcactgctc
aatgcgtggaagagcttcgaagacacgcacggctcgagcgagaacatcgagagcgttgcc
aaggtgctgcctaggaaggtcaagaagcgaagaaagctcgaggatggctcttttgaggag
tatatggactacgtattcccagcggatgatcagagtagcgcgaagatgagcaagctcatg
atggcagcgcagcagtggaagcaacaacaggccagcgagtcaaactcatga
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