Cercospora beticola: CB0940_06307
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Entry
CB0940_06307 CDS
T09388
Name
(RefSeq) General negative regulator of transcription subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cbet
Cercospora beticola
Pathway
cbet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CB0940_06307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_06307
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CB0940_06307
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CB0940_06307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_HEAT
CNOT1_TTP_bind
ARM_Cnot1
Motif
Other DBs
NCBI-GeneID:
35430115
NCBI-ProteinID:
XP_023455284
LinkDB
All DBs
Position
2:complement(3089437..3096947)
Genome browser
AA seq
2352 aa
AA seq
DB search
MVVFCATTRDRVIFLGCDDRCSFSLSKPPELFTAFPDVAATISLFLCVCCEMNEHTPSHS
LRSTNSQATRRTGIRTQQSERYTSDELGSRGGLTSIITNLSNASSNPASPQFLQEHSQSH
LRSPPPPTYLTLNDLAAIARRRVTSRQSSTSSVSTTASHPTSGRARNSAASGYHHLAAGD
AGLSSSGGSVGAVGISRLGRPPQSTVASPASSTGTHGAGSSSGQLNSLLLTQLNILLSTL
KGEADRTKWTAQLDKIRKLVSDSGMELFTTYFRRLLQSNASTVISSTPRAPENAGNYELL
IEEVQKLVKEPRQAQQIAEALDTNEGDVFRDFELQAFLDHFALDPVARVALLQPLRTVSI
PSLRQKADSLLTATFPLFLQTLAAQPLHAADADVDPAPSVLASIIERVIHDPRGLSDELR
ENLFYAVRIYYRTRGLRTPYAVESAMLLDELLQSQQDSRLVKRLQHEGPQATASLEACKE
VLAGAETRDFSYSQIANVLLYMVLVQNGDAYNPSVFVEAVRQHRAGARIDWTDVVTGFDK
EGLRVSKKQFLLLYNALLPLAREYANFDIQLLWGGNWHCQETQLSFVVAFLSMTPEELDV
MQIPNLRQAFELTSFATASDKIRAFAEKAIKHPLVSLDATEALFTMIFRSQETYNMAQQL
GIPDNIINQNMTTFVCAASNVPKPWGPLQEQALKQLFFPFLMKQHGNYDFVMHALWQHDK
HWVATRLIEWYNTDPNLLGLVYDHALEHGWLELLFTLPSSFAVDLAAYAHGKGQCNLVDW
ARNHISGMGPPQFAAAMTDFLQSKMQDETVVQRDQVAPTTPPLTLKTIHALLGLISDALY
EDQKTELFRHCLQLYPRLFNYGEDDARDAVIDANSGRGHSLPEQATQEMEERYKQMYGGQ
TTPDSLVTELRRLKASDNPSEQELFAAMLFGLFEEYNCFGEYPNEALATTAVLFGGLVSH
KVVSGIAEQQAIFMILDAVTQSSTEDPMYRFGLQALIHVLPRLKEWPPLAERILRIPSLR
GTSAMEAAETVLKEAQPQSAGLNGEATNGLTNGVLDDEEFEVVAPAFTAIQVDPPNPNIA
YEDPNEDISDKVTFVLNNVSKRNLDEKFKEIESALEEKYIQWFAHYLVDELAKSQPNFQS
LYLQILENFNKKLLWAEVLRETYLSCQKMLNAQATMENQHERATLKNLAGWLGQITLARN
QPILHRNLSFKDLLLEAHDNERLLVAIPFTCKTLVQAAHSKVFKPPNPWIVELLGLLSEL
YHGSSLKLNMKFEIEMLCRELSMDIKSIEPLDIIRSRPTLDQNNMLTNYIPEGPDAFGEM
TLMGLSKRGPNERFSPEAVISQVPDLGHMLQIPQAVGTTTPAQMKAIFVNAAQQAIYEII
APVVERSVTIASISTAELIQKDFVTEADVEKMRNAAHTMVKSLSGSLALVTCKEPLRMSI
TNNIRLLAGRSLPEQLPEGQILMFVNDNIDTVCRLVEQAAEDHSLAEIDLQLQEALTERQ
QHLDQRPNESFSHVPVSRWSTLIPEPYRQDQNGLNRQQLALYEDFGRQARITPAAHAGSA
SQDGTRAMTDVLGDSYLPNMPTPAEAPAMPHPGQAQRIPGMQGGLPRANGYLDPASLNDR
IITLMSELQQASREAPEEHISEIGEGATIRRVYGQLLVLIESAPQPETTVQACASHCLGL
IYGEAQKRLEIEVLARFLTQLCRMSQQACRQITMTIATVEDDRIFNAPATIALQGESLLD
VQHIDSLISKALKQRRPVALSFFKEIVEELLLGEEAVAHRAEFSSSYEALAQWLNSLSSP
EGSPQSFPQEALIGREIMRILQGSSNYTNGLPSPETDPKHADQQEYLFEEWIKLQRVGAE
NHRYLAFISQLHEKGILADPESNLNFLRTCLRYSIEHFEVVSSRPYGTIDIAYIAVDALA
KLVTMLVLFQAPADADRPVNKAKNLEGFIRLAVLVMNDAHNKHGERFNSRFYFRLFSAVL
CEIDAHKAQVTPEQEVEFNRVIATTLQVLQPRFFPGFLHAWIALLSHRLLVPAFLVNGRN
NGGWNQFTKLLAVLFQNLDDIFSSTELSAVAPDFYRAVVKFMMILHHDFPDYLVENHMQL
NAIIPAHCGQLQNIVTSAAPQSQSSQPNPFAPGLKINRLDQVRIAPSVFSDVDNVLEEAG
VKAAMERVCQSNELSEQNFAFLQAVVDRADGQISPILINALVLEVGINATSVSSAFSSVT
AAARLLTRLLQESGPRARYHLILAMTNQLRYVNSHTHYFSTALQHIFSTSQQDLQEQILR
VICERMMHDRPHPWGLLVLLLEMIKNPNYNLLEQSWVRAAPQVEQLLVTLTHPNQPLSSS
PFSGRLPIGARN
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atggtagtattttgtgcaacaacgcgagaccgagtgatttttcttggctgtgacgatcga
tgtagctttagtttgagcaaaccacccgaattatttactgccttccctgatgtagcagcg
acgatttcgctctttctatgcgtgtgttgtgagatgaacgaacacactccgtcgcacagt
ctcagatcaacaaactcgcaggcgacacgacgaacaggcattcgaacgcagcaatcggag
cggtacacttcagacgagctaggatctcgcggcggcttgacctcgattatcaccaacctg
agcaacgcttccagcaacccagcctcgccgcagttcttacaggagcatagccagtctcat
ttacgatcacctcctcctccgacgtacctcactctcaacgacctcgccgccatcgcaaga
cgccgcgtcaccagccggcagtcatcgacctcgtccgtgtccacgaccgcatcacaccct
accagtggccgcgctcgcaacagcgccgcttctggctatcatcacttagctgctggtgac
gcaggcttgtcatcgagcggcggaagtgttggtgcggtgggcatttcacgtctcgggaga
cctccgcaatcgacagtcgcatccccggcatcgtcgaccggtacacacggcgcgggcagc
tcgtctggacaactgaacagcttgctcttgacgcagctgaacatactgctgagcaccttg
aaaggagaggcagacaggacaaagtggacagcacaattggacaaaatccggaagctcgtc
agcgacagtgggatggagttattcacgacatattttcgacgattgctgcagagcaatgcg
tccacagtcatttctagcacacctcgcgctcccgaaaacgccggcaactatgaactactg
atcgaagaagtgcagaagctggttaaggagccgcggcaagcacagcagatcgcagaagcc
ctcgacaccaacgagggggacgtgttccgagactttgaactgcaggctttcctcgaccac
ttcgcattggaccccgtcgcgcgcgtcgcactgctgcaaccgctgcgaacagtgtcaatc
ccgagtttgcgacaaaaagcggactcgcttttgaccgcgaccttccctctattcctccag
accctcgccgcccaaccgctccacgccgccgacgccgacgtcgaccccgcgccatcagta
ctagcatcgattatcgagcgagtcatccacgatccgcgcggtctcagcgacgaactccgc
gaaaacctcttctacgcggtgcgcatctactatcgcacccgcggcttgcgcacgccatat
gcagtcgagtcggcgatgctgctggacgagctgctgcaatcgcagcaagactcgcgtctt
gtgaagcgcttgcagcatgaagggccgcaagcgaccgcgagcctcgaggcctgcaaggag
gtgctggcaggagcagaaacacgcgacttctcctactcgcagatcgcaaatgtgctcctg
tacatggtcctcgtgcaaaatggcgacgcgtacaatccctccgtcttcgtcgaggctgtc
cgtcagcaccgcgccggagcgcggatagactggactgatgtggtcacgggcttcgacaag
gagggtctgcgagtgtcaaaaaagcaatttctgctgctgtacaatgcgctgctcccgctg
gcgagggagtacgccaacttcgacatccagctactctggggcggtaattggcactgccag
gagacacagttgagcttcgtggtggcctttctgtccatgacgccggaagaactggatgtc
atgcaaataccgaatctgaggcaggcattcgagttgacgagcttcgcaacggcatctgac
aagatccgcgctttcgcagagaaggctatcaagcatccgctggtatcactggacgctaca
gaagctctcttcaccatgatcttccggtcacaggaaacgtacaatatggctcaacagctt
ggtattcctgacaatatcatcaaccagaatatgacgactttcgtttgcgccgcatcgaat
gtgccgaagccgtgggggcctttgcaagagcaagcgctgaagcagctattctttccattc
ttgatgaaacagcatggaaactacgattttgtcatgcacgctctgtggcagcacgataag
cattgggtggctactcgactcatcgagtggtacaacacagatccgaaccttctcggcctg
gtgtacgaccacgctctcgaacacggctggctcgagctcctcttcaccctacccagtagc
ttcgcggtggaccttgctgcgtacgcgcacgggaagggccaatgtaacctcgttgactgg
gctcggaatcacatcagtggcatgggtccaccacaattcgctgcggcaatgacggatttc
ctacagtccaagatgcaggacgagaccgtggtgcagcgcgaccaggtcgctccaacaacg
ccgccactgactctgaagaccatacatgccttgcttgggctcatcagtgatgctctatat
gaggaccagaagactgaactcttccgtcattgcttgcaactgtatcccagactattcaac
tatggcgaggatgatgcacgcgacgcagtcatcgatgccaacagtgggcgcggccattcg
ttgccggaacaggcgacgcaagagatggaagagcgctacaagcagatgtacggcgggcaa
accactcctgacagcctcgtgactgagctcaggcggctgaaggcatctgacaacccctca
gaacaagagctcttcgctgccatgctgttcggtctgttcgaggagtacaattgcttcgga
gaataccctaatgaagctcttgcgacgacggctgtgttattcggtggattggtgtctcac
aaggttgtgtcgggcattgcagaacaacaagccatttttatgatcttggatgccgtgacg
cagtctagcactgaggacccgatgtatcgctttggcttgcaagctctgatccatgttctt
ccccgcctgaaggaatggcctcctctggcggaacgcatcctgcgtatccccagtcttcgt
gggacgagtgccatggaagctgcggagaccgtgctcaaggaggctcaaccacagtcggct
ggattgaacggcgaagccaccaatggactcaccaacggcgtactggacgatgaggaattc
gaggttgtcgcgcctgcctttaccgccatccaggtcgacccgccgaacccgaacatcgca
tacgaagacccgaacgaggatatctccgacaaagtcaccttcgtcctaaacaacgtctcg
aaaaggaatctggatgagaagttcaaggagattgagagtgcgctcgaggagaaatacatc
caatggtttgcccattatcttgttgatgagctcgccaaatctcagccaaacttccaaagc
ctgtatcttcaaattctggagaatttcaacaagaagttgctctgggctgaagtgcttcgc
gagacatatttgagttgtcagaagatgctcaatgcgcaagccacaatggagaaccagcat
gaacgagcgactctcaagaatctggcaggctggctcggacaaataacacttgcacgcaat
cagcccattctgcatcgcaatctgtcgttcaaggacttactgcttgaggctcacgataac
gaaagactactcgtggccattccattcacatgcaagacgctcgttcaagccgcgcactcc
aaggtcttcaagccgccgaatccgtggattgttgagctattgggcctactcagcgaactc
taccacggctcatcgctcaagctgaacatgaagttcgagatcgaaatgctgtgtcgagag
ctcagtatggacatcaaatccatcgagccgctcgatatcattcgatcgaggcctacgttg
gaccaaaacaacatgctcacgaattacattccagaaggtccggatgcctttggggagatg
actttgatggggctgtccaagcgtggccccaacgaacgcttctcgcctgaagctgttatc
tctcaagtgccggatcttggacatatgctgcaaatcccacaggccgttggcacgaccact
cctgctcagatgaaggccatctttgtcaatgcagcacaacaggctatttacgagataata
gctccggtggtcgagcgttctgtaaccattgctagcatttctactgcagaactgatacag
aaggatttcgtcaccgaggctgatgtggagaagatgcgcaatgcggctcacacgatggtg
aagtcgttgtccgggagtctcgctcttgtcacatgcaaagagcctctgcggatgagcatc
accaacaacatccgtctcttggccggacgatccttgcccgaacagttgccggaaggtcaa
atcttgatgttcgtaaacgacaacatcgacacagtctgtcgacttgtggaacaagcagca
gaagatcattccctggcggagattgatttgcaactgcaggaagccttgacggagcgacag
caacatcttgatcagcggccgaatgagtcgttctcccatgtaccagttagtcgatggtcg
actctcatcccagaaccctacagacaggatcaaaatggattgaacaggcagcaactggca
ctctatgaggatttcggtcgacaagctcgcatcacaccagcagctcatgccgggtctgcc
tcgcaggatggcacgcgtgcaatgacagatgtgctcggcgatagctacctcccgaacatg
ccaactcccgctgaggcgcctgcgatgcctcatccaggtcaggcacagcgtattcccggc
atgcaaggcggactaccacgcgccaacggctaccttgatcctgcgagtctcaatgatcgt
atcatcacattgatgtctgagcttcaacaagcgtcgcgagaggcacccgaagaacatatc
agcgagatcggcgaaggtgccaccatccggcgcgtgtacggacaactactagtcttgatc
gaaagtgctccacaacctgagactacagtgcaagcgtgcgcgagccactgcctcggattg
atctatggcgaagctcaaaagcgactggaaatcgaagttctcgctcgtttcctcacccag
ctgtgccgaatgtcgcaacaggcctgccgacagattactatgacgattgctaccgtcgag
gacgacagaattttcaacgcgccagccaccatcgctctccaaggtgaaagcttgcttgac
gtccagcacatcgattcattgattagcaaggcgctcaagcagaggcgccccgtcgctttg
tcattcttcaaggagattgtagaagaactactcctgggcgaggaagcggtagctcatcgt
gctgagttctcatcatcgtatgaggcacttgcccagtggctgaacagcctgtcgagtcca
gaaggctcgccccagtcgttcccgcaagaggcactgattggcagagagatcatgcgcata
ctgcaaggctcgtcgaactacaccaatggcttgccgagtccagagactgatcctaagcac
gccgatcaacaagagtacctctttgaggagtggatcaagctgcagcgcgtgggcgcagag
aatcatcgctatctggcgttcatctcacaactgcacgaaaaaggcatccttgccgacccg
gagagcaacctcaatttcctccgtacgtgcctgcggtattcaatcgagcactttgaggtt
gtcagcagcaggccttacggcactattgacatcgcctatatcgccgtcgacgctctggcc
aagctggtaaccatgttggtgctgttccaggctcctgccgacgctgaccgacccgtcaac
aaggcgaagaacctcgaaggtttcattcgcttggcggtgctggttatgaacgatgcccac
aacaagcatggtgagcgcttcaacagccgcttctatttcaggttgttttctgctgtcttg
tgtgagattgacgcacacaaagcgcaagtgacgcccgaacaggaggtcgaattcaacaga
gtcatcgccacaactctgcaagtgctgcagccacgatttttccctggattccttcacgca
tggatcgctcttctgagccatcgtctcctcgtgccggctttcctggtgaatggtcggaac
aacggaggatggaatcaattcacaaagctgctggcggtcttgttccagaacttagacgac
atcttctcgtctacagagttatctgcagtagcaccggacttttatcgcgcggtggttaag
ttcatgatgattctgcaccacgacttcccggattacctggtcgagaaccacatgcagctg
aatgctatcatcccagctcactgcggccagctgcagaacattgtaaccagcgcggctcca
caatctcagtcatcgcagccaaatccttttgcgcctggcctgaagatcaatagacttgac
caggtccgcattgctccatcggtcttctctgatgttgacaacgtactcgaagaggctggt
gtgaaagctgccatggagcgtgtctgccagtcaaacgagctgagcgagcagaacttcgcc
ttcctgcaagctgttgtggaccgtgcggatggccaaattagcccgattctgatcaacgca
ctggtccttgaggttggcatcaatgctacttcagtgtcatcggcgttctcgtctgtcact
gctgcagcgcgcctccttactcgtctgcttcaagaaagcggcccacgagcacgctaccat
ctcatcctggcaatgacgaaccagcttcgctacgtcaactcgcacacgcattacttctct
actgctctacagcacatctttagcacgagccaacaagatctgcaagagcagattctgcga
gtcatttgcgagcgtatgatgcatgaccgtcctcatccttggggacttctagtgttgttg
ctagagatgatcaagaatccgaactacaacctgcttgagcaatcttgggtcagagctgcg
ccacaggtcgagcagcttctcgtgactctgacccacccgaatcaaccgcttagcagcagt
ccctttagtggacgcttgccgatcggtgctcgcaactag
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integrated database retrieval system
