Clostridium botulinum F Langeland: CLI_3113
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Entry
CLI_3113 CDS
T00563
Symbol
aspS-2
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
cbf
Clostridium botulinum F Langeland
Pathway
cbf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CLI_3113 (aspS-2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cbf01007
]
CLI_3113 (aspS-2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbf03016
]
CLI_3113 (aspS-2)
03029 Mitochondrial biogenesis [BR:
cbf03029
]
CLI_3113 (aspS-2)
Enzymes [BR:
cbf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
CLI_3113 (aspS-2)
Amino acid related enzymes [BR:
cbf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CLI_3113 (aspS-2)
Transfer RNA biogenesis [BR:
cbf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CLI_3113 (aspS-2)
Prokaryotic type
Other AARSs
CLI_3113 (aspS-2)
Mitochondrial biogenesis [BR:
cbf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CLI_3113 (aspS-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
DUF4443
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
ABS39554
UniProt:
A7GHS2
LinkDB
All DBs
Position
complement(3279182..3280963)
Genome browser
AA seq
593 aa
AA seq
DB search
MGEALRGLKRTIMCGESRENNIGEKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEE
INKEAFEKSDNVKSEYCIAVTGEIVKRQSPNNDMETGAVELKGEDIKILSESETPPIYIK
EGLDASENIRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPE
GARDYLVPSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQPEFTQ
IDMELSFVEEDDVIELNERLLAKVFKEVGGIDVKLPIERMPYKIAMEKYGSDKPDLRFGM
EINDLTEAVKNSEFKVFKGAIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAW
IAYKEDEIKSPIAKFLTEEEMKAILEKMDAKAGDLILIVADKNNVVFESLGALRLHIAKE
LDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIELLDTEPGKVRAKAYD
IVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLAYGL
DRMIMFLAGTENIKDVITFPKNQNAFCPLTEAPNVVDENQLEELGIKKIEKED
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagcgttaagaggacttaagagaacaataatgtgtggcgagtctagagaaaat
aatataggtgaaaaggtcacagttatgggatgggttcaaagaaaaagaaatttaggagga
ctaatctttgtagatttaagagatagaacaggaattatgcaaatagtttttggtgaagaa
ataaataaagaagccttcgaaaaatcagataatgtaaaatcagaatattgtatcgctgta
actggtgaaatagttaaaagacagtcaccaaacaatgatatggaaactggagctgtggaa
ttaaagggagaagatataaaaatattatctgaatcagaaacacctcctatatatataaaa
gaagggttagatgcatctgaaaatataagattaaaatatagatatcttgacttaagaaga
ccagatatgcaaaaaatatttatgataagacacaagacatgtaaagttgttagagatttc
ttagatgaaaatggatttttagaaatggaaacaccaatacttacaaaaagtaccccagaa
ggagctcgtgactatttagttccaagtagaaattacaaaggaatgttttatgcattacca
caatcaccacaaatatttaaacagcttttaatggtctcaggttatgataaatattttcaa
ataacaaaatgttttagagatgaagatttaagagctaatagacaaccggaatttacacaa
atagatatggaattatcttttgtagaagaagatgatgtaattgaattaaacgaaagatta
ttagctaaggtatttaaagaagttgggggaatagatgtaaaacttccgatagaaagaatg
ccatataaaatagctatggaaaaatacggttcagataaaccagatttaagatttggaatg
gaaataaatgatttaacagaagctgttaaaaattcagaatttaaagtattcaaaggtgct
atagaagcaggtggctctgtaagagcaataaaagcagaaaattgtgctactatgggaaga
aaacaaatagataagctacaagattttgttaaaacatataaagcaaaaggattagcttgg
atagcttataaagaggatgaaataaaatctccaatagctaaatttttaacagaagaagaa
atgaaagctatattagaaaaaatggatgctaaagcaggagatttaatattaatagtagca
gacaaaaacaatgtagtattcgaaagcttaggtgcattaagactacatatagcaaaagaa
ttagatattataaataaaaatgagtttagatttgtgtggataactgaattcccactatta
gcttataatgaagaagaaggtagatatcaagcggagcatcatccattcacagctataatg
gatgaggatatagaactattagatacagagccaggaaaagtaagagcgaaagcttatgat
atagtattaaatggagaagagctaggcggaggaagtattagaatacatgatagtaaactt
caagaaaaaatgtttagtgtattaggctttactaaagaaaaagcttgggaaagatttggg
ttcttacttgaagcatttaaatttggaccaccaccacatggtgggttagcttatggtctt
gatagaatgataatgtttttagcaggaacagagaatattaaagatgtaataacattccct
aagaatcaaaatgcattctgtccattaacagaagcaccaaatgtagttgatgaaaatcaa
ttagaagaattaggaataaaaaaaatagaaaaagaagattaa
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