Clostridium botulinum F Langeland: CLI_3473
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Entry
CLI_3473 CDS
T00563
Name
(GenBank) putative 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cbf
Clostridium botulinum F Langeland
Pathway
cbf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLI_3473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbf03400
]
CLI_3473
Enzymes [BR:
cbf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CLI_3473
DNA repair and recombination proteins [BR:
cbf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLI_3473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Xlink
Motif
Other DBs
NCBI-ProteinID:
ABS40703
UniProt:
A7GIN8
LinkDB
All DBs
Position
complement(3607433..3608350)
Genome browser
AA seq
305 aa
AA seq
DB search
MDFNYIENYTDGIVIKDVRNFELAHIFECGQCFRWYKTEEGSYIGVAYGKVIEVEKANND
VILHNATEDDFKNIWAEYFDLYRDYSEIKNILSKDEILAKSVEFGHGIRLLKQDPFEIIV
SFIISANNRIPMIKKAIKNISERWGDPIEYKGNIYYSFPTVEQLKDATEDELKACSVGFR
AKYIKDTVNKIYQNSIEECEQYEKEYDMLWIKNQQDDICHKVLQNYSGIGAKVADCVMLF
SMEKYSAFPVDVWVKRAMQYFYLAPDVSLKKIRDFGREKFGELSGFAQQYLFYYARENKI
DVNQE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggattttaattatatagaaaattatacagatggtatagttattaaagatgtaagaaac
tttgaattagcacatatttttgaatgtggtcaatgtttcagatggtacaaaacagaagag
ggttcttatataggagtagcttatggaaaggttatagaagtagaaaaagcaaataatgat
gtaatattacataatgctacagaagatgattttaaaaatatttgggcagaatattttgat
ttatatagagattatagtgaaataaagaatatattaagtaaggatgaaatattagctaag
tctgttgaatttggacatggaataaggcttttaaaacaagatccttttgaaataatagtg
tctttcataatttctgctaataatagaataccaatgattaaaaaagctataaaaaatata
agtgaaagatggggtgatcctatagagtataaaggtaacatatattatagctttcctaca
gtagaacaacttaaagatgcaacagaggatgaattaaaagcatgtagtgttggttttaga
gctaaatatataaaagatactgtaaataaaatataccaaaattctatagaagaatgtgag
caatatgagaaagagtatgatatgttatggataaagaatcaacaagatgatatatgtcat
aaagtgctacaaaattatagtggtataggtgctaaagttgcagattgtgttatgttattt
tctatggaaaagtattctgcatttccagtagatgtttgggttaagagggctatgcaatat
ttctatctagcccctgatgtatccctaaaaaaaataagagattttggaagggagaaattt
ggagaattatcaggatttgcccaacaatatttgttttattatgcaagagaaaacaaaatt
gacgttaatcaagaataa
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