Clostridium botulinum F Langeland: CLI_3571
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Entry
CLI_3571 CDS
T00563
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
cbf
Clostridium botulinum F Langeland
Pathway
cbf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLI_3571 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbf03400
]
CLI_3571 (uvrB)
DNA repair and recombination proteins [BR:
cbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLI_3571 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLI_3571 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_19
4HB_MCP_1
SWI2_SNF2
AAA_5
Talin_middle
Motif
Other DBs
NCBI-ProteinID:
ABS39367
UniProt:
A7GIY3
LinkDB
All DBs
Position
complement(3731311..3733299)
Genome browser
AA seq
662 aa
AA seq
DB search
MNQFKVISKFNPTGDQPKAIKSIAKGIEKREKFQTLIGVTGSGKTFTMANIIEKVQKPTL
VLAHNKTLAAQLCSEFREFFPNNAVEYFVSYYDYYQPEAYVAQSDTYIEKDASINDEIDK
LRHSATSALFERKDVIIVASVSCIYGLGNPEEYKKLTISLREGMEKDRDEIIKKLVEIQY
ERNDIDFSRGTFRVKGDVLDIFPASSSSKAVRVEFFGDEIDRIKEFDVLTGETITKLKHI
SIFPASHFATSKDRLEVAIKDIEEELEERVKELVSQDKILEAQRLKQRTNFDIEMMREVG
YCTGIENYSRVLDGRAKGTPPQTLLDYFPQDFLLFIDESHVTLPQVKAMQAGDKSRKDSL
VEYGFRLPCAYDNRPLTFKEFENKLNQVVFVSATPAKYELEYSTNTAEQVIRPTGLLDPE
IIVKPVKGQIDDLYTSIQETIKRGFRILVTTLTKKMAEDLTDYLKEMGVKTRYLHSDIDT
IERMKIIHDLRKGEFHVLVGINLLREGLDIPEVALVTILDADKEGFLRSETSLIQTVGRA
ARNSESKVIMYGDVITKSMEKTIKETNRRRKIQMEYNEEHGIVPKTIIKDIREVIQISDI
AEERKEYDNLNEALKSYNNDIDKLIEKYEEEMKEAAQNLQFEKAAHLRDVIYKLKKDKET
EL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaatttaaggtaatttcaaaatttaatcctacaggagatcaacctaaagctata
aaatctattgctaaaggtatagaaaaaagagaaaaatttcaaactttaataggcgtgacc
ggatcaggtaaaacttttactatggcaaatattatagaaaaagttcaaaagcctacttta
gttttagctcataataaaacgctggcagcacaattatgctcagaatttagagagtttttt
cctaataatgcagtagaatattttgtatcttattatgattattatcaaccagaagcatac
gtagctcaaagtgatacatatatagaaaaagatgcatctataaatgatgaaatagacaaa
ttaaggcactcagccacatcagctttatttgaaagaaaagatgtaataattgttgcttct
gtatcttgtatatatggacttggtaatccagaagagtataaaaagttaactatatcgtta
agagaaggtatggagaaggatagagatgaaataattaaaaaattagtggaaatacaatat
gaaagaaatgacatagatttttctagaggtacttttagagtaaaaggtgatgttttagat
atttttcctgcttcatctagtagcaaagcagtaagagtagaattttttggtgacgaaata
gatagaataaaagaatttgatgttttaacaggagaaactataactaagttaaaacatata
tctatattcccagcatctcactttgcaacttcaaaggatagactggaagttgctataaaa
gatatagaagaagagctagaagaaagagtaaaagaattagtatctcaggataaaatatta
gaggctcaaagattaaagcagagaactaattttgatatagaaatgatgagagaagttgga
tactgtacaggcattgaaaattattcaagagtgttagatggaagagcaaaaggaacacca
cctcagacccttttagattattttccacaggattttcttctttttatagatgaaagtcat
gtaactttgccacaggtaaaagctatgcaggcaggggataaatctagaaaagattctttg
gtggaatatggattcaggttgccttgtgcctatgataataggcctcttacctttaaggaa
tttgaaaataaattaaatcaagtagttttcgtaagtgctacaccagcaaaatatgaatta
gaatattcaactaacacagcagagcaagtaataaggcctacaggacttttagatcctgaa
ataattgtaaaaccagtaaagggacagatagacgacttatatactagcatacaagaaaca
attaaaagaggatttagaattctagtaactacattaaccaaaaaaatggcagaagacttg
actgattatttaaaagaaatgggagtaaaaactagatatttacattcagatatagatact
atagaaagaatgaaaataatacatgatcttagaaaaggagaatttcatgttttagtagga
ataaacttgctaagagaaggattggatataccagaagtagctttagttacaatattagat
gcagataaagagggatttttaagatcagaaacatctcttatacagactgtcggaagagca
gcaagaaactctgaaagtaaggtaattatgtatggggatgttataaccaaatccatggaa
aagactataaaagaaactaatagaagaagaaaaatacaaatggaatataatgaagaacat
ggaattgttcctaaaactataataaaagatataagagaagtaattcaaataagtgatata
gcagaggaaagaaaagaatatgacaatttaaatgaagcattaaaatcttataataatgat
atagataaattaatagagaaatatgaagaagaaatgaaagaggcagcacaaaatttacag
tttgaaaaagcggctcatttgagagatgtaatatacaaattaaaaaaagataaagaaaca
gaactttaa
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