Clostridium botulinum A Hall: CLC_3641
Help
Entry
CLC_3641 CDS
T00575
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
cbh
Clostridium botulinum A Hall
Brite
KEGG Orthology (KO) [BR:
cbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbh03016
]
CLC_3641 (gidA)
03036 Chromosome and associated proteins [BR:
cbh03036
]
CLC_3641 (gidA)
Transfer RNA biogenesis [BR:
cbh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CLC_3641 (gidA)
Prokaryotic type
CLC_3641 (gidA)
Chromosome and associated proteins [BR:
cbh03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CLC_3641 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
DAO
Pyr_redox
FAD_binding_2
AlaDh_PNT_C
HI0933_like
ThiF
Lycopene_cycl
DUF8000
Motif
Other DBs
NCBI-ProteinID:
ABS37690
UniProt:
A5I815
LinkDB
All DBs
Position
complement(3754633..3756510)
Genome browser
AA seq
625 aa
AA seq
DB search
MKYSAGDFDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHL
VREIDALGGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEDNVV
LRQLEVIEIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYP
ANDLSQSLLDLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHNKLDKDQI
SCYLTYTSEETHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPE
GENTEELYVGGMSSSLPEDVQIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFK
NINGLYGAGQFNGSSGYEEAAAQGLIAGINAVLKIKEKNPLILKRSDAYIGVLIDDLVTK
GTNEPYRMMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERL
RNMQITGKREINEFLLEKGSTELKKPISLYELIKRPELDYFKVESLDDKRPSLSDDEKEE
INIIAKYEGYINKQLEQVEQFKKYEDRLIPKSINYLDIKGLRLEAIQKLEKIKPINIGQA
SRISGVSPADISVLLIYMERKNREN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattcagctggagattttgatgtagtagttattggagcaggtcatgcgggatgc
gaggctgcattagcttctgcaagaatgggatgtaaaacattaatatgtactatgaaccta
gatagtattgctcttatggcttgtaatcctaatataggtggaacagcaaaaggacattta
gtaagagaaatagatgctttaggtggagaaatgggaataaatatagaccatacatttata
caatctagaatgcttaatacttctaagggtccagcagttcattctttaagagctcaagca
gataaaaaaagatatagtgagagaatgaaacatctactagagaaggaagataatgttgtt
ttaagacagctagaagttatagaaatagatgtagaggataatgaagttaaaggtgtttta
actaaaaatggagcatattttactacaaaagctataatattatgtactggaacttattta
aagggtaaaataataataggagatataatatatagtagtggaccaagtggtttgtatcct
gctaatgatttatctcaaagtttattagatttgggtataaatcttagaagatttaaaaca
ggaacccctgcaagaataaataaaagatcagtagatttttctaaaatgatagaacaacca
ggagacgaaaaaatagttcctttttcatttattcataataaactagacaaagaccagatt
tcttgttatttaacttatacatctgaagaaactcataaaataatacatgaaaatatacat
agatctccattatataatggatcaatagaaggggtaggtccaagatactgcccatctatt
gaagataagattgttagatttccagataaagataagcatcaaatattcatagaaccagaa
ggtgaaaatacagaagaattatatgttggcggtatgtctagttcattaccagaagatgtt
caaataaaaatgtatagaagtgtaccaggtttagaaaatgcagaaatactaagaactgcc
tatgctatagagtatgattgtattgatcctcaacaactagatttaaccttagaattcaaa
aatataaatgggttatatggggcaggtcaatttaatggaagttcaggttatgaggaagca
gcagcacaggggcttatagctggaattaatgctgtgttaaaaataaaagaaaaaaaccca
ttaatattgaaaagatcagatgcttatataggtgtacttatagatgatttagtaacaaag
ggcacaaatgagccttatagaatgatgacatcaagagcagaatatagattgctgttaaga
caagataatgcagatttaagattaacagagttaggctataaagtcggacttgtaaaagag
gataggtataataaatttctaaataggaaaaaaaatgtagaaaatgaaatagaaagatta
agaaatatgcaaataacaggaaaaagagaaataaacgaatttttattagagaaagggtct
actgaactaaaaaagcctattagtttatatgaattaataaaaagaccagaattagattat
tttaaagttgaatctttagatgataaaagaccaagtttaagtgatgatgaaaaagaagaa
ataaatataattgcaaaatatgagggatatataaacaaacagttagaacaagttgagcaa
tttaagaagtatgaagatagattaataccgaaaagtattaattatctagatataaaaggg
ttgagattagaggctattcaaaaattggaaaaaataaagcctataaatatagggcaggct
tctagaatttcaggtgtatctccagcagatatatcagtattacttatatatatggaaaga
aaaaatagagaaaactag
DBGET
integrated database retrieval system
