KEGG   Clostridium botulinum B Eklund 17B (NRP): CLL_A0157
Entry
CLL_A0157         CDS       T00696                                 
Symbol
hup
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
cbk  Clostridium botulinum B Eklund 17B (NRP)
Brite
KEGG Orthology (KO) [BR:cbk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbk03032]
    CLL_A0157 (hup)
   03036 Chromosome and associated proteins [BR:cbk03036]
    CLL_A0157 (hup)
   03400 DNA repair and recombination proteins [BR:cbk03400]
    CLL_A0157 (hup)
DNA replication proteins [BR:cbk03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CLL_A0157 (hup)
Chromosome and associated proteins [BR:cbk03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CLL_A0157 (hup)
DNA repair and recombination proteins [BR:cbk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CLL_A0157 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 Peptidase_C80 Arm-DNA-bind_4
Other DBs
NCBI-ProteinID: ACD23926
UniProt: B2TI16
LinkDB
Position
177645..177923
AA seq 92 aa
MNKAELITSMAEKSKLTKKDAELALKSFIESVEEALESGEKVQLVGFGTFETRERAAREG
RNPRTKEVINIPATTVPVFKPGKEFKDKVNNK
NT seq 279 nt   +upstreamnt  +downstreamnt
gtgaataaagcagaattaataactagtatggctgaaaaaagtaaattaactaaaaaagat
gcggaattagctttaaaatcttttattgaaagcgtagaagaagcattagaatctggtgaa
aaagtgcaactagttggcttcggtacttttgaaacaagagaaagagcagctagagaagga
agaaatcctagaactaaagaagtgatcaatataccagcaacaacagtaccagtatttaag
ccaggaaaagaattcaaagataaggttaataataaatag

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