Entry |
|
Symbol |
holA
|
Name |
(GenBank) DNA polymerase III, delta subunit
|
KO |
|
Organism |
cbk Clostridium botulinum B Eklund 17B (NRP)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cbk00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLL_A0882 (holA)
03430 Mismatch repair
CLL_A0882 (holA)
03440 Homologous recombination
CLL_A0882 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:cbk03032]
CLL_A0882 (holA)
03400 DNA repair and recombination proteins [BR:cbk03400]
CLL_A0882 (holA)
Enzymes [BR:cbk01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLL_A0882 (holA)
DNA replication proteins [BR:cbk03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLL_A0882 (holA)
DNA repair and recombination proteins [BR:cbk03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLL_A0882 (holA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
901097..902131
|
AA seq |
344 aa
MINYEVFERDIEKGNIKNSYIFCGLDEELIKDSINSILNKTIGNDKDNLNLIRIDGMKTN
YDEIMNACETFPMMSDKKVVIVYRANFLKDKSDEASNKIYKSILKYASDMPPYTILIMYH
LFNDKREKPNKNKKLNSLDKLITVVHCDKLRRDSYIKKINDLFKINKKNIGRIELIYFAE
KVQSNFDIIKREIDKLISYTDGKEITKRDIDMLISSSGEDDVFDLVELIAQRKIERAMDV
MKEILYKSDQHMLIISNIQRHFIKLYDIKTGLRQGKKISNFMTELRLPQFVCEKLVAQSS
KFTEKQLSELVKLCVNTENNLKSSGLDKTMEMELLLINTLTVKR |
NT seq |
1035 nt +upstreamnt +downstreamnt
ttgattaattatgaagtttttgaaagagacattgaaaagggaaatataaaaaattcatat
atattttgtggattagacgaagaacttataaaggattctataaattcaatacttaataag
accataggaaatgataaagataatcttaacttaataagaatagatggtatgaaaacaaat
tatgatgaaataatgaacgcatgtgaaacttttccaatgatgagtgataaaaaagttgtt
attgtatacagagctaattttttgaaggataaaagtgatgaagcatctaataagatttat
aaaagcatattaaaatatgcttctgacatgccaccatacactattttaataatgtatcac
ttatttaatgataaaagagaaaaacctaataaaaataaaaagttaaattcattagataaa
ttaataacagttgtacattgtgataaattaagaagagattcttatattaagaaaataaat
gatttatttaaaataaataaaaagaatatagggagaatagaacttatatattttgcagaa
aaagtgcaaagtaattttgacataataaaaagagaaattgataaattgatttcatataca
gatggaaaagaaataaccaaaagagatattgatatgttaatatcatcatctggagaagat
gatgtgtttgatttagttgagttaatagcacaaagaaaaatagaacgtgcaatggatgta
atgaaggaaattttatataaatcggatcaacatatgttaataataagtaatattcaaaga
cattttattaaactttatgatataaaaactggattaagacaaggaaaaaagataagtaat
tttatgactgagttaagattaccacaatttgtttgcgaaaaattagttgctcaaagtagt
aagtttacagaaaagcaattaagtgaacttgttaaattgtgtgttaatacagaaaataat
ttgaaatctagtggactagataagactatggaaatggaattattgcttattaatacttta
acagtaaaaagatag |