Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_10930
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Entry
IPM89_10930 CDS
T10208
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cbly02044
]
IPM89_10930
02035 Bacterial motility proteins [BR:
cbly02035
]
IPM89_10930
Secretion system [BR:
cbly02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
IPM89_10930
Bacterial motility proteins [BR:
cbly02035
]
Pilus system
Pilus assembly proteins
IPM89_10930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PD_1611-like_2nd
T4P_PilY1
PilY1_beta-sandw
PilY1_homolog_dom
PA14
Motif
Other DBs
NCBI-ProteinID:
QQS53400
LinkDB
All DBs
Position
2432720..2437918
Genome browser
AA seq
1732 aa
AA seq
DB search
MSNRRIASPWRWFGSLLAGLMLASFLPQAHAEEDISNLPLFLGGNGVPLAMLVMGRDHKL
YYEAYNDASDLNQDGQIDVGYKPDLTQDNQPLNYFGYFDSYKCYSYNNNNGVFTPTVVTS
SKKCSGAWSGDFLNYLTTSRVDALRRVLYGGYRSTDSATETILERSRIPQDAHSWGKEYV
SISHDGYDIRDYTPLDLPAADTRHLFANTTLQNDTNQLPLLRVLTNSKYRIWEWVAIERP
VAGDKCLDGGSGPICATAGGTLWEFVPDTILTLTQTVHKVTTRNSSTGNPYPTNSSQFDS
LVLTNAITANLCGSRSVSTINGSGNPFDGVNGCNNDNYINVFTGQINIATAGTYTFSVDG
DDAVDLQIDGTTVASWYGGHGNCNCNDHSGSISLSAGAHTLRFRHEENSGGDNYYLRWQR
TVPTSARTDYTVRVKACVSGLLESECKGYPENAPTVYKPTGLLHDYGETDRMAFGLLTGS
FKKHMSGGVLRKNVSSFKNEINANTGQFIVPASAGSIVDTISKMRIVGFQGSYAYNDGGC
GVPMVASMQEGRCAMWGNPVAEMMYESMRYFAGKTGPLSAYDFTNEFSSFVTADKLNLPK
PAWSDPYRSEANGGYPYCSRPFEVVIADLPSFDTDQLPGVDSNFGGGISSDIGTLNVASL
GQTIWDNEEGGTKKIFIGQSGSTYDTAPTPKDVSSFGNIRGLAPEEPTRQGGYYAAALGY
FGKTTGIRQISVAGLASAHIVKTDVFGVSLSSPLPTINIPMADGKVITVVPFAKSVGGSG
INATKGQFQPTNTIVDFFIETIANTGTGNHDDDINEGRPYIKFRINYEDSEYGSDHDMDA
IVTYTFTVDDSNQLIIDLSSDYEAGGILHHMGYVISGTTTDGVYLEVRDWNRLTTNTGSP
SSDVDYFLDTPPGFQGTPPAPDSGSGTWNDGVALPTQSSRTFSPSSTLETSTASFIKHDP
LWYAAKWGGFIENTDDANNLPDKQGEWDRDGDGKPDNYFLVTNAGKLKQQLSETFEEIVR
RTSSAAAVAANSSSLIAGSRLFQARFNSGDWTGELRALSVNPDTGAVEANPTTGAPLEIW
TAQAQLRGQNFNTGRQILTIKPSTKAGIPFRWPSSIPSDPNTQTGSTALDQAQVAALKGS
GNNGDGQARLDYLRGDATNEDPAGKQYRKRADGTIRNVLGDIVNSSPFYVAAPSAGYSFG
DYQTFSNTYQNRRPMVYIGANDGMLHGFDANSGQEVFAYVPSAIFNKLSALTELTYKNLH
QFYVDASPTVIDVQFSDGNWHTVLVGGLRSGGVSYFALDVTAAGTVNSSGTVTNAGSLTE
TNAASVVLWEFADDDLGLSFSQPSLARRSDGDDNADNNPWIAVFGNGYNSNNAGKTPTTT
AVLYVVNVQTGAIIRKIDVGEGKGLSTPSVVDSDGDDTADFIYAGDLEGNLWRFDIRDPT
PSNWTYTKLFVARDANGNPQPITAAPQVTRQPTLATDLKTSLMVVFGTGRYLGTTDVLNT
DQQTFYGVWDDVDGSACAAGSTTACFTRADLQAQVYCPGNPVDPTCQVVDSNNTTVTSAG
TLSDSSGRNFRVTSAICVEYSADSNAKLCGDPAKAQRRGWYLDLKLAGERVVGDPLIIGS
RVAFTSILPDADPCQYGGNSWLNILNAVSGQRVTTTFLGVGSNASTPVTESSTGFAPSSV
GIVGIASAPNVMRAPDQQKSILYVSTSGGTVENYAIVDTEIGRQSWRQLEFQ
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacagacgaattgccagtccgtggcgttggtttggaagcctattagccggtttg
atgctcgcatcattcctgccacaagcccatgctgaagaggatatttccaatctaccactc
tttctgggtggcaatggtgttcctctcgccatgctggtcatggggcgcgatcacaagctt
tattatgaagcctataacgatgcttccgacctgaaccaggatggtcagattgatgtcggt
tacaaaccggatctaactcaagataaccaaccgctcaattacttcggttattttgactca
tacaagtgctatagctataacaataacaatggagtgtttaccccgactgtcgtcacgagc
agcaaaaagtgctcgggggcttggagtggtgattttctaaactatttgaccacttccagg
gtggatgccctgcgccgggtgctttatggtgggtatcgatcgaccgatagcgcgacggaa
accattctcgaacgctcgcgcatccctcaggatgcccatagctggggcaaggagtacgtc
agcatttcccatgatggatacgatattcgggactatactccgctcgacttgccggcagcg
gacacccgtcatctatttgccaacaccacattgcagaatgacaccaaccaactgccgttg
ctgcgagtactcacaaacagcaaatatcgaatttgggaatgggtagcgatcgaacgtccc
gtggccggggataagtgccttgatggtggaagtgggccgatttgtgcgactgctggaggt
acattatgggaatttgtgccggatacaattctcacgctaacccagaccgtgcataaagtt
accacccgaaatagcagtactggaaatccctatccaacaaatagcagccaatttgatagt
ttggtgcttaccaacgccatcaccgccaatttatgtggttcccggtcggtttccaccatc
aatggtagtggcaaccccttcgacggtgttaatggctgcaataatgacaattacattaac
gtatttaccggacaaattaatattgctactgctggaacatacacgttttcagtcgatgga
gacgatgccgttgacctgcaaattgatggcactactgtagcttcctggtatggtggtcat
ggcaattgcaactgcaatgaccactccggttcaatttccttatctgccggtgcgcatact
ctgcggttccggcatgaagaaaatagtgggggcgataattactatttaaggtggcaacgt
acagtccccacttcagccaggacggattacaccgtccgagtgaaggcctgcgttagcggt
ttgctggaatccgagtgtaaaggctatccggagaatgctcccacagtctataagccaact
ggcctattgcatgattatggtgaaaccgatcgcatggctttcggtttattgacaggttct
tttaagaagcatatgtcaggtggtgtgcttcgcaaaaatgtttcatccttcaagaatgaa
atcaatgccaatacggggcagttcatagtaccggccagcgcgggtagcatcgtggataca
atcagcaaaatgcggatcgttggttttcaaggcagctacgcctacaacgacgggggttgc
ggggtacccatggtggcgtccatgcaggaggggcgctgtgccatgtggggtaatcccgtc
gctgagatgatgtacgaaagcatgcgctactttgcgggcaagaccggaccactctccgct
tacgattttacaaatgagttcagcagttttgtcactgcggataagctcaatctacccaaa
ccagcttggtccgacccttatcgctccgaagccaatggcggttatccatactgctccaga
ccgttcgaagtggtgatcgcggatcttccttcttttgacaccgatcaattgcctggagtt
gactcgaactttggcggcggcatcagcagtgatatcggaaccctgaatgttgccagtctc
ggtcagactatttgggacaacgaggaaggcggtacgaagaagatcttcatcggccagtct
ggtagcacttatgacaccgccccaacgcccaaggatgtcagcagtttcggcaacattcgt
ggattggcgccggaagaaccaacccggcaaggtggctattacgcggctgccttgggctat
ttcggcaaaaccactggaatccggcaaatcagcgttgccggtttagccagcgcccatatt
gttaagaccgatgttttcggcgtgtccttgtcttcaccgttacccaccatcaatattccg
atggccgatgggaaagtaatcacggtcgtgccttttgcaaaatcagtgggtggtagtggc
atcaatgcgacgaaaggacagtttcagccgaccaataccattgtcgatttcttcattgaa
actattgccaataccggaactggcaaccatgatgatgatatcaatgaaggacgaccttat
atcaagttcagaatcaattatgaagattctgaatatggttccgatcatgacatggatgct
attgtgacctatacattcacggtcgatgattccaatcaattgatcattgacctcagttcc
gattatgaggcaggcggtattctccatcacatgggttatgtgatctcgggtactaccaca
gatggcgtgtacttggaagtccgcgattggaatcgattaactactaatacaggaagtccc
agcagcgatgtggattatttcctggatacccctcccggctttcagggtacgccgcccgct
ccagactctggaagcggcacttggaatgacggagttgcgttaccaacacagtcgagtcgg
actttctcaccatcaagcacactggagacatccaccgcttccttcatcaagcacgaccca
ctatggtatgcggccaagtggggcggtttcatcgaaaacaccgacgacgctaataacctg
ccagacaaacagggcgaatgggatcgggatggcgacggtaaacccgataactacttccta
gtgaccaacgcaggcaagctcaagcagcagttaagtgaaacctttgaggaaatcgtcagg
cgcaccagttctgcggcggcggtagcggccaattccagctcgctgatcgccggtagccgg
cttttccaggctcgctttaatagcggcgactggactggtgaattgcgggcgctgtccgtt
aatccggacactggagcggtggaggccaatccgacgacgggagcaccactggagatctgg
acggctcaagctcaattgagagggcagaacttcaacaccggccgccaaatcctgaccatc
aaaccttccacaaaggctggcattcccttccggtggccaagttccatcccgagcgatccc
aacacgcagaccggttcgacggcgctggatcaagcgcaagtcgccgcgctgaaaggcagc
ggcaacaacggcgacggtcaagcgcgccttgattatctgcgcggcgatgcgactaacgaa
gatccggcgggcaagcaatatcgcaagcgggctgatggcaccattcgcaatgtgctgggg
gatatcgtcaactccagcccgttctacgtggctgccccgtccgccggctattcttttggg
gactaccagaccttttccaacacgtatcagaaccgccggcccatggtgtacatcggggcc
aacgacggcatgctgcacggctttgacgccaactccgggcaggaagtatttgcctatgtg
cccagcgcgatctttaacaagctgagcgccctaacggagctgacgtataaaaacttgcac
cagttctatgtggatgcttcaccgaccgtaatcgacgtgcagttcagcgacgggaactgg
catacggtgctggtcggcgggttgcgcagcggcggtgttagctatttcgccttggacgtc
actgcggcgggtaccgtcaacagcagtggtacggtaacgaatgccggttcgctgaccgaa
actaatgccgccagcgtggtgttgtgggaattcgcggatgatgatttggggttgtccttc
agccaaccttcgctggcgcggcgaagtgacggtgacgataatgcagataacaatccctgg
atcgcggtgttcggtaatggctacaacagcaataacgcgggcaaaacgccaaccactacc
gctgtcctctatgtggtgaacgtccaaaccggggcgattattaggaagatcgatgtgggt
gaggggaaagggctatccacgcccagcgtcgttgatagcgacggcgacgatacggccgac
tttatctatgcgggcgacttggaaggtaacctgtggcggttcgatatccgcgaccccact
cccagcaattggacctataccaaactatttgtcgctagggacgccaacggtaacccacag
ccgatcacggctgctcctcaagtgacgcggcagcccaccttagccacggatctgaaaacg
tccttgatggtggtgttcggcacggggcgttacttgggcaccaccgacgtgctcaatacc
gaccaacagacgttttatggcgtttgggacgatgtggacggcagtgcgtgtgcggcgggc
tccaccacggcttgttttactcgcgccgacttgcaagcacaggtttattgtccggggaat
ccggtcgatccgacctgtcaggtggtggattccaataataccaccgtgacttccgcgggc
actctcagcgacagcagcggtagaaactttcgagtaaccagcgccatatgcgtggaatac
agcgctgattccaatgccaaactgtgcggcgatccagcaaaggcccaacggcgcggctgg
tatcttgacctgaagctggcgggcgagcgggtggttggcgatccgctgattatcggcagc
cgcgtggcattcaccagcattctgccggatgccgatccctgccagtacggcggtaatagc
tggctgaatatattgaacgcagtaagcgggcaacgggttacgacaactttcctgggcgtg
ggcagcaatgcgagtacgcccgtcaccgaatcgagtaccggctttgctccgagcagcgtg
ggcatcgtgggtatcgcgtcggcgccgaacgtgatgagagcaccggatcagcagaaatcc
atcctctatgtcagtacttcgggaggtacggtggagaattacgcgatcgtggacaccgag
attggccggcaatcttggcggcaactggagtttcaataa
DBGET
integrated database retrieval system
