Clostridium botulinum BKT015925: CbC4_1430
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Entry
CbC4_1430 CDS
T01475
Name
(GenBank) metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cbn
Clostridium botulinum BKT015925
Pathway
cbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CbC4_1430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbn03019
]
CbC4_1430
Messenger RNA biogenesis [BR:
cbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CbC4_1430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
OmpH
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
AEB76109
LinkDB
All DBs
Position
complement(1516972..1518486)
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AA seq
504 aa
AA seq
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MIVTILIAIFVIIYVRKNISQAKIAEAEVKSKQIIVDAERDAEAKKKEAILEAKEEVHKI
RNDFEKESRERRNEIQRLERRIIQREELLDKKSEAIESKEEALNKKQQDINEKETSIDEL
YEKQRQELERLSNLSSDEARELLLEETKKEIKHDLAIMIKDMENKAKEEADKKAKEIIST
AIQRCAADHVAESTVHVVSLPNDEMKGRIIGREGRNIRALETLTGVDLIIDDTPEAVILS
GFDPIRRQVARIALEKLIIDGRIHPARIEEMVEKAKQEVENDIKEEGEQATFETGVHGLH
QELIKLLGRLKYRTSYGQNVLKHSMEVAYLAGLMASELGMDPTLAKRAGLLHDIGKAVDH
EVEGPHALIGSEMAKKYHESAIVVNAIAAHHGDVEYDSIEAILVQAADAISAARPGARRE
TLEAYIKRLEKLEEIANSYEGVEKSYAIQAGREVRIMVKPEDIDDYGCIEMSKNIVKRIE
SELEYPGQIKVNIIRETRAVEYAK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgattgttacaattttaattgctatatttgtaataatatatgtaagaaaaaatatttca
caagctaagattgctgaagctgaagttaaatctaagcagataatcgtagatgctgagaga
gatgctgaggcaaaaaagaaagaagcaattttagaggcaaaagaggaagttcataaaatt
agaaatgattttgaaaaagaatctagggaaagacgtaatgaaattcaaagattagaaaga
agaattattcaaagagaagagctgctagataagaaaagtgaggctattgaaagcaaagaa
gaagccttaaataaaaagcagcaagatattaatgagaaagaaactagtatagatgaactc
tatgaaaagcaaagacaagagttagaaaggctgtcaaacttatcttcagatgaggctaga
gaattattattagaagaaactaaaaaagaaatcaaacatgatcttgcaataatgattaag
gatatggaaaataaggcaaaagaagaagccgacaaaaaagcaaaagaaatcatatccaca
gcaatacaaagatgtgctgctgatcatgttgcagagagtactgttcatgtagtttcatta
cctaatgatgagatgaaaggtagaattataggaagagaaggaagaaacataagagcgctt
gaaactttaacaggtgttgatcttataatagatgatactccagaagcagtaattttatct
ggatttgatcctattagaagacaagtggcacgaatagctcttgaaaagttaataattgat
ggtagaattcatcctgctaggatagaagaaatggttgaaaaagcaaaacaagaagttgaa
aatgatattaaagaagaaggagagcaagctacttttgaaacaggagtacatggattacat
caagagttaataaaacttttgggaagattgaagtaccgtacaagttacggacaaaatgtg
ttaaaacattctatggaagtagcttatttagcaggtcttatggcatctgaattaggaatg
gatccaactctagctaaaagagctggtttattacatgatataggtaaagcggtggatcat
gaagtagaaggtcctcatgcacttataggttcagaaatggctaagaagtatcatgaatct
gctatagttgttaatgctatagctgcacatcatggagatgttgaatacgattcaattgaa
gctatccttgttcaagcagctgatgctatatcagcagcgcgtcctggtgcaagaagagaa
actctagaagcttatatcaagagactagaaaaacttgaagaaatagcaaattcatacgaa
ggtgtagaaaaatcttatgctatacaagctggaagagaagttagaatcatggttaaacca
gaggacattgatgattatggatgcatcgaaatgtcgaaaaacattgttaaaagaatagaa
agtgagctagagtatcctggacaaattaaagtaaatattatcagggaaactagagcagta
gaatatgcaaaataa
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