Enterocloster bolteae: CGC65_03905
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Entry
CGC65_03905 CDS
T05466
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cbol
Enterocloster bolteae
Pathway
cbol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGC65_03905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbol03021
]
CGC65_03905
03400 DNA repair and recombination proteins [BR:
cbol03400
]
CGC65_03905
Enzymes [BR:
cbol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGC65_03905
Transcription machinery [BR:
cbol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGC65_03905
DNA repair and recombination proteins [BR:
cbol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGC65_03905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF5887
Motif
Other DBs
NCBI-ProteinID:
ASN93885
UniProt:
A0A412ZEG3
LinkDB
All DBs
Position
814125..818009
Genome browser
AA seq
1294 aa
AA seq
DB search
MEKSRIRPVPAGKSVRMSYSRQKEVLEMPNLIEIQKDSYQWFLKEGLKEAFDDISPIADF
AGHLSLEFVDFTLCKDDIKYTIEECKERDATYAAPLKVKVRLYNKDKDEMNEHEIFMGDL
PLMTDTGSFVINGAERVIVSQLVRSPGIYYGIGHDKVGKELYTCTVIPNRGAWLEYETDS
NDVFYVRVDRTRKVPVTVLIRALGFGTNAEILELFGEEPKLLASFGKDTSDNYQDGLLEL
YKKIRPGEPLSVDSAESLLNSMFFDPRRYDLAKVGRYKFNKKLSFKYRLNGQVLAEDVVD
TATGEILAEAGTKLDKESAMRIQNAAVPYVWVDGPDRKQKVLSNMMVELSAYVPFDPEEV
GVTELVYYPALASILEEAGTDEESLKEAVRRNIHDLIPKHITKEDILASINYNMHLEEQV
GNADDIDHLGNRRIRAVGELLQNQYRIGLSRMERVVRERMTTQDMDGITPQSLINIKPVT
AAVKEFFGSSQLSQFMDQNNPLAELTHKRRLSALGPGGLSRDRAGFEVRDVHYTHYGRMC
PIETPEGPNIGLINSLATYARVNQYGFIEAPYRVVDKTTDPSSPRVTDEVVYLTADEEDN
FVVAQANEALDEEGHFIHNNVSGRFRTETSEFQKKTIDLMDVSPKMVFSVATAMIPFLEN
DDANRALMGSNMQRQAVPLLTTEAPAVGTGIEAKAAVDSGVCVVAKNAGVVERSASNEII
IRRDSDGNRDVYHLTKFKRSNQSNCYNQKPIVYKNDHVEAGEVIADGPSTSNGEIALGKN
PLIGFMTWEGYNYEDAVLLSERLVQEDVYTSVHIEEYEAEARDTKLGPEEITRDVPGVGE
DALKDLDERGIIRIGAEVRAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLK
VPHGAYGIIVDAKVFTRENGDELSPGVNQTVRIYIAQKRKISVGDKMAGRHGNKGVVSRV
LPVEDMPFLPNGRPLDIVLNPLGVPSRMNIGQVLEIHLSLAAKALGFNVSTPIFDGANEN
DIMDTLEVANDYVNLSWDEFKAKYEDLLKPSVIDYLGAHLEHRELWKGVPISRDGKVRLR
DGRTGEYFDGAVTIGHMHYLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEM
EVWALEAYGASYTLQEIMTVKSDDVVGRVKTYEAIIKGENIPEPGVPESFKVLLKEMQSL
GLDVQVLRDDGTEVEMNENIDYGDTELRAMLEGERRFEEKESYAQFGYQEQEFKDSELVA
VEEEEEVSADDYTEEADDEDDLFLDEAADGEDEE
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagcagaatacgtccggtaccggccgggaaaagcgtaagaatgagctattca
agacagaaagaagttcttgaaatgcctaacttgattgagattcaaaaagactcctaccag
tggttcttaaaagaaggactgaaggaggcatttgatgatatctctcccatagcggacttt
gcaggccatttgagtctggaattcgttgactttacattgtgtaaggatgatataaagtat
accatcgaagagtgtaaagaacgggacgcaacttacgctgcaccacttaaggtaaaggta
agactgtacaataaagataaagatgaaatgaatgaacacgagattttcatgggcgatctg
cccctgatgacagataccggttcctttgtgattaacggtgctgagcgtgttattgtcagc
cagctggtacgttcccctggtatctactacggtattggccatgataaagtgggtaaggaa
ctgtatacctgtactgttatccccaaccgtggtgcatggctggagtacgagacagactcc
aatgacgtattttatgtacgtgtagacaggacccgcaaggtgcctgtgactgtattgatt
cgtgccctgggcttcggaaccaatgcggaaatcctggaactcttcggcgaggagccaaag
ctcttagccagcttcggaaaggacacctccgataattaccaggatggccttctggaatta
tataagaagattcgtcccggcgagccgttatctgttgacagtgcagaaagtctccttaac
agcatgttctttgaccccagaagatatgaccttgcaaaagtcggcagatataaatttaat
aagaaactgtcctttaagtaccgtctgaacggacaggtactggcagaggatgtggtggat
accgccacaggcgagattctggcagaggcaggcaccaagcttgacaaggaatctgccatg
aggattcagaacgcggcagttccctatgtatgggtggacggtcctgacaggaagcagaag
gttctctccaacatgatggtggagctttccgcttatgtgccctttgacccggaggaagtg
ggcgttacggagttagtatattacccggccctggcttctatcctggaagaagctggcacc
gatgaggagtctcttaaggaggctgtgcgcaggaatatccacgacctgattccaaaacac
attacaaaggaagatattcttgcttccattaactataatatgcatctggaggagcaggtg
ggcaacgcagatgacatcgaccatctgggcaaccgccgtatccgtgccgtaggcgaactc
cttcagaaccagtaccgcatcggtctgtcacgtatggagcgtgtggtaagggagcgtatg
accacccaggatatggatggcattactccccagtccttaattaatatcaagcccgtgact
gcggctgtgaaggagttcttcggaagttcccagctgtcccagttcatggaccagaataac
ccgctggcagagctgacccataagcgccgtctctccgccctgggccctggcggtctgtcc
agggaccgtgccggattcgaggtgcgagatgtacactacacccactacggacgtatgtgc
cctatcgagacgcctgaaggtcccaacatcggtctgatcaactccctggcaacctatgca
agggtaaaccagtacggattcatcgaggctccctaccgcgtggtggataagaccacggat
ccgtccagcccaagggtaacggatgaggtggtgtacctgaccgctgacgaggaagataac
ttcgttgtggcacaggcaaatgaggccctggatgaggagggccacttcatacacaataac
gtatccggacgtttccgtacagagacatccgagttccagaaaaagaccattgacctgatg
gacgtttctcctaagatggtattctccgttgcgacggccatgattccattcctggagaac
gatgatgccaaccgcgccctgatgggttccaacatgcagcgtcaggcagtgccccttctg
accacagaagcccctgccgtgggtacgggtattgaggccaaggcagctgttgactccggc
gtatgtgtggtggctaagaacgcgggcgtggtagagcgctctgcttccaatgaaatcatt
atccgcagggacagcgacggcaaccgcgatgtgtaccatctgaccaaatttaagagaagc
aaccagagcaactgttacaaccagaagccaatcgtatataagaatgaccatgtggaagcc
ggcgaggtaatcgcagacggcccatccacctccaacggtgagattgcccttggaaagaac
ccccttatcggattcatgacatgggaaggctacaactacgaggatgcggtcctgttatcc
gagcgcctggttcaggaagatgtatatacctctgtccacattgaggagtatgaggcagaa
gcccgcgataccaagctgggaccggaagagattacccgcgatgtgccgggcgtgggcgag
gatgccctgaaagacctggatgagcgcggcatcatccgtatcggtgcggaggtccgcgcg
ggagatatcctggtaggaaaggtaactcctaagggcgagaccgagctgaccgcggaggag
cgcctgctgcgcgccatcttcggcgagaaggccagggaagtccgcgacacctcccttaag
gtgcctcacggcgcatacggcatcatcgtggatgccaaggtatttaccagggagaacgga
gacgagctgtcaccgggcgtaaaccagacagtccgcatctacattgcccagaagcgtaag
atttctgtgggcgataagatggccggacgtcacggtaacaagggtgttgtttcccgcgtg
cttcctgttgaggatatgcctttcctgcccaacggacgccctcttgacatcgtgcttaac
cctctgggcgtgccttcccgtatgaacatcggacaggtgctggagatccacttaagcctt
gcagccaaggccctgggcttcaacgtatccaccccgattttcgacggcgcaaacgagaac
gacattatggataccctggaagtggccaacgattatgtgaacctgtcctgggatgaattt
aaagctaaatacgaagacctgctgaagccttctgttatcgactacctgggcgcccatttg
gagcacagggagctttggaagggtgtgcccatcagccgtgacggtaaggtccgcctgaga
gacggacgtaccggcgagtactttgacggcgctgttaccatcggacacatgcactacctg
aagctgcaccatctggttgacgataagatccatgcgcgttcaaccggcccttactccctg
gttacacagcagcctctgggcggtaaggcccagttcggcggacagcgtttcggagagatg
gaggtttgggcactggaggcatatggcgcttcctataccctgcaggaaatcatgaccgtt
aagtcggacgacgttgtgggccgtgtgaagacctacgaagccatcatcaagggagagaat
atccctgagccgggcgtaccggagtcctttaaggtgctccttaaggagatgcagtccctg
ggcctggatgtacaggtactgagggatgacggcaccgaggtcgagatgaatgagaatatt
gattacggcgatacagagctgcgcgccatgttagagggcgagcgccgcttcgaggagaag
gaatcctatgcacagtttggctatcaggaacaggaattcaaggatagcgagctggtagct
gtggaggaggaagaagaagtaagcgccgatgattacaccgaagaggctgatgacgaggat
gatttgttcctggatgaagctgctgacggtgaagacgaagaatag
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