Calonectris borealis (Cory's shearwater): 142073976
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Entry
142073976 CDS
T11211
Symbol
CACNA1A
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04010
MAPK signaling pathway
cbor04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
142073976 (CACNA1A)
04020 Calcium signaling pathway
142073976 (CACNA1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbor04040
]
142073976 (CACNA1A)
Ion channels [BR:
cbor04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
142073976 (CACNA1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
142073976
NCBI-ProteinID:
XP_074990422
LinkDB
All DBs
Position
31:complement(435056..475736)
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AA seq
2191 aa
AA seq
DB search
MARFGDEMPTRYGAGGGGTGGPGGAAGGRGAGGPRQGGPPGAQRMYKQSMAQRARTMALY
NPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLP
DEDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGIL
ATVGSQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAI
IGLEFYMGKFHTTCFDLVTDEIKVEVPCGTDEPARICPNGTKCKKYWEGPNYGITQFDNI
LFAVLTVFQCITMEGWTDLLYYSNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFA
KERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDETEGEPRHPFDALRRAT
IKKSKTDLLSPEDAEEQLADISSVGSPFARASLKSAKLENATFFHKRERRMRFHIRRVVK
TQAFYWTVLSLVALNTLCVAIVHYDQPDWLSDFLYYAEFIFLGLFMSEMFIKMYGLGTRP
YFHSSFNCFDCAVIIGSIFEVIWAVVKPGTSFGISVLRALRLLRIFKVTKYWASLRNLVV
SLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDDGTPPTNFDTFPAAIMTVFQIL
TGEDWNAVMYDGIKSQGGVKGGMVFSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK
DEQEEEEAANQKLALQKAKEVAEVSPLSAANMSVTMKEQQKNQKPSKSVWEQRTSELRKQ
NLLASREALYSELDPEERWKVPYARHLRPDMKTHLDRPLVVDPQENRNNNTNKTRPGEPP
LEPRFGQPRAEELRRQPRYPDPGGPRPGDPPGPAGRRPRSTSREPEREPSQERAYADAER
LKALERRHRPGGSRDGRAGSPQPEREHRRHRAHRRAAEEGEEGGRPERRPRHREGGRPVR
GEGDGEHGDGERRRRHRHAAPAAYDGEGKRDDKERRHRRRRETQAPGVPAGPTLSTTRPI
QQDVGRREPPVAEDIDNMKNNKLATAEPPAPPPVGNHTACPAGAPPRRPPATPNAPPETS
LVVTNPGAPNNPAKGGGKPEHTAVDIPPPLPPPPANALVQVNRNANPEPLPRKEEEEEKK
EEGDGQEENGPKPMVPYSSMFILSTTNPFRRLCHYIVNLRYFEMCILMVIAMSSIALAAE
DPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMVDLGLVLHQGAYFRDLWNILDFIVVSGA
LVAFAFTGSSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVY
MLFMFIFAVVAVQLFKGKFFYCTDESKEFEKDCRGEYLVYEKDNEVKAQKREWKKYEFHY
DNVLWALLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFV
NIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNRQSFQYRMWQFV
VSPPFEYTIMAMIALNTIILMMKFYDASDAYENVLKMFNNVFTSLFSLECLLKIMAFGVL
NYFRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLW
TFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIEEEDDESAITQHNNFRTFFQALML
LFRSATGEAWHEIMLSCLSGKPCDQNSGIKEDECGNEFAYFYFVSFIFLCSFLMLNLFVA
VIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKK
CPHRVACKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDAELRKEMI
AIWPNLSPKNLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAMREEQNRTPLMF
QRMEPPSPTQEGTPGPDAVPTAEPGAGLAARDGGLKESQSWVTQRAQEMFQKTGTWSPER
GHPEDVPNSRPNSQLVEMREMAKDGYSDSDYLPMEGHGRAASMPRLPAENQRRKVRPRGN
NLSTISDASPMKRSASMLGHPRARGIRLDDYSLERVIPEDGQRHHQRRRERSHRTSERSL
GRYTDVDTGLGTDLSVTTQSGDLPPKERDPERGRAKDRKHRHHHHHHHHHHGPGDKDRCP
PERHDYGRPRSRDRRWSRSPSEGREHAAPRQ
NT seq
6576 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggagacgagatgccgacccgctacggggcaggaggcggcgggaccggc
ggccccgggggcgcggcggggggccggggtgcggggggcccgcggcagggtggccccccc
ggggcgcagaggatgtacaagcagtcgatggcccagcgagcccgcaccatggctctctac
aaccccatccccgtccggcagaactgcctgacggtcaaccgctccctcttcctcttcagc
gaggacaacgtggtgaggaaatacgccaaaaagatcaccgaatggcctccttttgaatac
atgattttagccaccatcatcgcgaactgcatcgtcctggcgctggagcagcacctgccc
gacgaggacaagacccccatgtcggagcggctggacgacacggagccgtacttcatcggc
atcttctgcttcgaggcggggatcaagatcatcgcgctgggcttcgccttccacaaaggc
tcctacctgcgcaacggctggaacgtgatggacttcgtggtcgtcctcaccggcatcctg
gccacggtgggctcccagttcgacctgcggacgctgcgggccgtgcgcgtgctccggccc
ctcaagctggtctcggggatcccaagtttacaagtcgtcctgaagtccatcatgaaggcg
atgatcccgctgctgcagatcggcctcctcctgtttttcgcgatcctcatttttgcaatc
ataggattagagttttatatgggcaaatttcacaccacctgcttcgacctggtgacggac
gagatcaaggtggaggtcccctgcgggacggacgagccggcccggatctgccccaacggc
accaagtgcaagaagtactgggaggggcccaactacggcatcacccagttcgacaacatc
ctcttcgccgtcctgaccgtcttccagtgcatcaccatggaagggtggacagacctcctc
tactacagcaacgatgcctcagggaacacttggaactggctgtacttcatccccctcatc
atcatcggctccttttttatgctgaacctagtgctgggggtgctgtccggggagtttgcc
aaagagcgggagcgggtggaaaaccgccgggcgttcctgaagctgcggcggcagcagcag
atcgagcgggagctcaacggctacatggagtggatctccaaggcggaagaagtgatcctg
gcggaggacgagaccgagggagagccccggcaccccttcgatgctctccggagggccacc
atcaagaagagcaagacggacctgctgagccctgaggacgccgaggagcagctggccgac
atctcctccgtgggctcccccttcgcccgcgccagcctcaaaagtgccaagctggagaac
gccaccttcttccacaagcgggagcggcggatgcgcttccacatccgccgcgtggtgaaa
actcaggccttctactggaccgtgctcagtctggtagcgctcaacaccctgtgtgttgct
atcgttcactacgaccagccagattggctttccgacttcctctactatgcagaattcatt
ttcttgggactctttatgtccgaaatgtttataaaaatgtacgggctggggacgcggcct
tactttcactcgtccttcaactgcttcgactgtgccgttatcatcggaagcatcttcgag
gtgatctgggctgttgtgaagccgggaacatccttcgggatcagcgtgctacgagctctc
aggttactgcgcattttcaaagtcacaaagtactgggcttccctgaggaacctggtggtc
tccctcctgaactccatgaagtccatcatcagcctcctcttcctcctcttcctcttcatc
gtcgtctttgcccttttggggatgcagctcttcgggggacagttcaattttgacgacggg
acccctcccaccaacttcgacactttcccagcagcaataatgacggtgtttcagatcctg
acgggtgaagactggaacgcggtgatgtacgacgggatcaaatctcagggcggcgtcaag
ggggggatggttttctccgtctacttcatcgtcctcaccctcttcggcaactacaccctc
ctcaatgtcttcttggccatcgcagtggacaacctcgccaacgcgcaggagctcaccaag
gacgagcaggaggaggaagaagccgccaaccaaaagctggcgctgcagaaggcgaaggag
gtggccgaagtgagcccgctctccgctgccaacatgtccgtcaccatgaaggagcagcag
aagaaccagaagccctcgaagtcggtgtgggagcagcggacgagcgagctgcggaagcag
aacctgctggccagccgggaagccctctacagcgagctggaccccgaggagcgctggaag
gtgccctacgcccgccacctgcgccccgacatgaagacccacctggaccggccgctggtg
gtggacccccaggagaaccgcaacaacaacaccaacaagacgcgtcccggcgagccgccg
ctggagccccgcttcggccagccccgcgccgaggagctccggcggcagccgcgctacccc
gatcccggcggcccccgtcccggggatccccccggccccgccggccgccggccccgcagc
accagccgcgagcccgagcgggagcccagccaggagcgcgcctacgccgacgccgagcgc
ctcaaagccctcgagcgccggcaccggccgggcggtagccgggacggccgcgctggctcg
ccccagcccgagcgcgagcaccggcggcaccgggcgcaccggcgggcggccgaggagggc
gaggagggcgggcggcccgagcggcgaccgcggcaccgggagggcggccggccggtgcgg
ggcgagggggacggggagcacggcgatggcgagcggcgccggcggcatcggcacgccgca
ccggccgcctacgacggcgaaggcaagcgggacgacaaggagaggcggcaccggcggcgg
cgggagacccaggcccccggggtgccggcgggccccacgctctccaccacccgccccatc
cagcaggacgtggggcgccgggagccccccgtcgccgaggacatcgacaacatgaagaac
aacaaactggccaccgccgagccccccgcgcccccccccgtgggcaaccacaccgcctgc
cccgccggggcccccccccgccggccccccgccacccccaacgcgccccccgaaaccagc
ctggtggtcaccaaccccggcgcccccaacaaccccgccaaggggggggggaagccggag
cacacggccgtggacatccccccccccctcccgccgccccccgccaacgccctggtccaa
gtgaacaggaatgccaaccccgagccgctgccccgcaaggaggaggaggaggagaagaag
gaggaaggcgacgggcaggaggagaacggccccaagcccatggtgccctacagctccatg
ttcatcctctccaccaccaacccgttccgccggctgtgccactacatcgtcaacctgcgg
tacttcgagatgtgcatcctgatggtcatcgccatgagcagcatcgcgctggccgccgag
gaccccgtgcagcccaacgccccccgcaacaacgtcctgcgctacttcgactacgtcttc
acgggcgtcttcaccttcgagatggtgatcaagatggtggatttggggctggtgcttcac
caaggtgcctatttccgggacctgtggaacattctggacttcatcgtggtcagcggggcg
ctggtggccttcgccttcaccggcagcagcaaggggaaggacatcaacaccatcaagtcc
ctccgcgtcctccgtgtcctccggcccctgaagaccatcaagaggctgcccaagctcaag
gccgtcttcgactgcgtggtgaactccctgaagaacgtcctcaacatcctcatcgtctac
atgctcttcatgttcatcttcgccgtggtggccgtccagctcttcaagggcaagttcttt
tactgcaccgacgagtccaaggagttcgagaaggactgcaggggggaatacctcgtctac
gagaaggacaacgaggtgaaggcgcagaagcgggagtggaagaagtacgagtttcactac
gacaacgtcctctgggcgctgctcaccctcttcaccgtctccaccggcgagggatggccg
caggtcctcaagcactcggtggatgccacctacgagaaccaggggccgagccccggctac
cgcatggagatgtccatcttctacgtggtctacttcgtggtcttccccttcttcttcgtc
aacatcttcgtggccttgatcatcatcaccttccaggagcagggggacaagatgatggag
gagtacagcctggagaagaacgagagagcctgcatcgactttgccatcagcgccaagccc
ctgacgcggcacatgccgcagaaccggcagagcttccagtaccgcatgtggcagttcgtg
gtgtcgccgcccttcgagtacaccatcatggccatgatcgccctcaacaccatcatcctc
atgatgaagttctacgacgcttcggacgcctacgagaacgtgctgaagatgttcaacaac
gtcttcacctccctcttctccctcgagtgtctcctgaagatcatggccttcggcgtgctg
aattacttccgcgacgcctggaacatctttgacttcgtcacggtcctgggcagcatcacg
gacatcctggtgacggagttcgggaacaacttcatcaacctcagcttcctgcggctcttc
cgggcggcgcggctcatcaagctgctgcgccagggctacaccatccgcatcctgctctgg
accttcgtccagtccttcaaggctctgccctacgtctgcctgctcatcgccatgctcttc
ttcatctacgccatcatcgggatgcaggtcttcggcaacatcggcatcgaggaggaggat
gacgagtcggccatcacccagcacaacaatttccgcaccttcttccaggccctgatgctc
cttttccggagcgccacgggggaggcctggcacgagatcatgctgtcctgcctcagcggg
aaaccctgcgaccagaactccggcatcaaagaggacgagtgcggcaacgagttcgcctac
ttctacttcgtctccttcatcttcctctgctccttcctgatgctgaacctcttcgtcgcc
gtcatcatggacaacttcgagtacctgacgcgtgactcctccatcctgggcccccaccac
ctggacgagtacgtccgcgtctgggctgagtacgaccccgccgcctgtggccgcattcat
tataaggatatgtacagtttattacgcgtaatatctcccccattgggcttaggcaagaaa
tgccctcatagggttgcttgcaagcggctgctccgcatggacctgccggtggccgacgac
aacaccgtgcacttcaactccaccctcatggccctgatccgcaccgccctcgacatcaag
atcgccaaagggggagccgacaagcagcagatggacgcggagctccgcaaggagatgatc
gccatctggcccaacctctcccccaaaaacctggaccttctcgtcaccccccacaagtcc
accgacctgacggtggggaagatctacgccgcgatgatgatcatggagtactaccggcag
agcaaagccaagaagctgcaggccatgcgggaggagcagaaccggacgccgctgatgttc
cagcgcatggagccgccgtcccccacgcaggaggggaccccggggccagacgcggtgccc
acggccgagccgggcgcggggctggccgcacgcgacgggggcctgaaggagagtcagtcc
tgggtcacccagcgcgcccaggagatgttccagaaaacggggacctggagccccgagcgg
ggacaccccgaggacgtccccaacagccgccccaactcccagttggtggagatgcgcgag
atggcgaaggacggctactccgacagcgactacctgcccatggaggggcacggccgcgcc
gcctccatgccgcggctccccgccgaaaaccagaggaggaaggtccgaccccgagggaat
aacctcagtaccatctcggacgccagccccatgaagcgctcggcctccatgctgggccac
ccgcgcgcccggggcatccgcctggacgactactcgctggagcgcgtcatccccgaggac
ggccagcggcaccaccagcgccggcgggaacggagccaccgcacctcggagcgctccctc
ggccgctacaccgacgtggacacagggctgggcacggacctcagcgtcacgacgcagtcg
ggcgacctcccgcccaaggagcgggacccggagcggggccgcgccaaggaccgcaagcac
cggcaccaccaccaccaccaccaccaccaccacggccccggggacaaggaccgctgcccc
cccgagcggcacgactacgggcggccccgctcccgcgaccgccgctggtcccgctccccc
agcgagggccgggagcacgcggccccccggcagtag
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