Calonectris borealis (Cory's shearwater): 142074120
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Entry
142074120 CDS
T11211
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1
KO
K11467
PHD finger protein 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
142074120 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142074120 (PHF1)
03036 Chromosome and associated proteins [BR:
cbor03036
]
142074120 (PHF1)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
142074120 (PHF1)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
142074120 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_2
Prok-RING_1
PHD_ash2p_like
DUF4537
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
142074120
NCBI-ProteinID:
XP_074990669
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All DBs
Position
33:complement(313487..324480)
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AA seq
568 aa
AA seq
DB search
MPLRPLPPGATAGEGRGGKAGSGAGKKGGACATGRGQGAGGATSCVPAIGGGVCAGRSRG
AGSPRRRGARPAAGGQRRGAGHPGCDGERNGGPPPPPPPLPPPDPPNPPRFWEGQDVLAR
WTDGLLYLGTIKKVDAGRRGCLVQFEDNSQFLVLWKDISPAAVPGEEQSCCVCSGQALNP
ENLLVRCEKCGHAYHQQCHLPAAHPAGPWMCRRCVFAVATKRGGALKKGPHAKAMLSMKT
VLPYQLKTLEWDPPHLANRQQCYCYCGGPGEWNLKMLQCRSCAQWFHEACTQCLSKPLLY
GDRFYVFECCVCTGGAESVRRLPLRWVDVAHLILYHLSVCCKKKYFDLEREILPFANANW
DALLLGQLAETPKGERYGQLLGALSSHKDRFISGREIKKRKGLFGLHTRAPPPLPPNFLG
GPPPAAPPPLTDSSFPSGQGRGGARRRPPPRRAQGPPGGSYNFRRTDARCPPSTPIRMFA
SFHPSANTAPSLSAAASPDPESESPERPPRRPPPARPKRRPSPPPPAPPPPAPPPAPPRG
GPTRVLARRVTLDGTVQYLVEWGGGGML
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgccgctccggccgctcccgccaggcgcaacggccggcgaagggcggggcgggaaggcg
gggtctggggcggggaagaagggcggagcctgcgcgacggggcggggccagggggctggc
ggggcaacaagctgcgtccccgcaattgggggcggagtctgcgcggggcggagccgaggg
gcggggtctccgcggcggcggggggcgcggcctgcggctggagggcagcggcggggggcg
gggcacccaggatgtgatggcgagcgaaacgggggtcccccccccccgccccccccgctg
cccccccccgacccccccaaccccccccgattttgggagggccaggacgtcctcgcccgc
tggaccgacggcctcctctacctgggcaccatcaaaaaggtggacgcggggcgtcggggc
tgcctggtgcaattcgaggataattcccaattcctcgttctctggaaggacatcagcccc
gcagcggtgccgggcgaggagcaatcctgctgcgtctgctccggccaagccctgaacccc
gaaaacctcctggttcgctgcgaaaaatgcggtcatgcctaccaccagcagtgccacctc
cccgccgcccaccccgccggcccctggatgtgtcgtcgctgcgtcttcgccgtcgccacc
aagagagggggggctctcaagaagggcccccacgccaaggcgatgctcagcatgaaaacc
gtcctcccctaccagctcaagaccctggagtgggaccccccccacctcgccaaccgccag
cagtgctactgctattgcggggggcccggagagtggaatttgaagatgctgcagtgccgg
agctgcgcccagtggttccacgaagcctgcacccagtgcctgagcaaacccctgctctac
ggggaccggttttacgtcttcgagtgctgcgtctgcaccggaggggctgagagcgtccgg
cggctgccgctgcgatgggtggacgtcgcccacctcatcctctaccacctgagcgtctgc
tgcaagaagaaatatttcgacctggagcgggagatcctgcccttcgccaacgccaactgg
gacgccctcctgctgggccagctcgctgagacccccaagggggagcgctacgggcagctg
ctgggggctctcagcagccacaaggacaggttcatctccgggcgggagatcaagaagcgc
aaggggctcttcgggctgcacacgcgggcgccccccccgttgccccccaattttttgggg
gggccccccccggccgccccccctccgctcaccgacagcagcttcccctcagggcaggga
agagggggggcccgccggcgcccacccccccgccgcgcccagggcccccccggcggctcc
tacaacttccgacgcaccgacgcccgctgcccccccagcacccccatccggatgttcgct
tccttccacccctccgccaacacggcccccagcctcagcgccgccgccagcccggacccc
gaaagcgagagccccgagcgccccccccgccgccccccccccgcccgccccaagcgccgc
ccctcccccccgccccccgccccgcccccccccgccccgccccccgcccccccccgcggg
ggtcccacccgtgtcctcgcccggcgggtgacgctggacgggaccgtccagtacctggtg
gagtggggggggggggggatgctctga
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