Calonectris borealis (Cory's shearwater): 142076004
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Entry
142076004 CDS
T11211
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3 isoform X1
KO
K12600
superkiller protein 3
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142076004 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142076004 (SKIC3)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
142076004 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_16
TPR_12
TPR_11
TPR_17
TPR_8
TPR_CcmH_CycH
ANAPC3
TPR_9
ARM_TT21_C
TPR_15
Fis1_TPR_C
BTAD
Arc_MA
TPR_30
TPR_5
TolB_N
HAT_PRP39_N
ARM_TT21
HAT_Syf1_M
TPR_20
Retrotran_gag_2
Motif
Other DBs
NCBI-GeneID:
142076004
NCBI-ProteinID:
XP_074994380
LinkDB
All DBs
Position
Z:1225631..1274989
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKSNQTDVKGDLADVYQKLLELYESGDKQKWCDVCN
KLVELYHQEKKYLEVAETWQKLIQRKQEEGAEKAELHQLWKKMIQLLKDSAQNQDNKTEQ
SLLTAFEHAMNSADTVPGEDHQNLYKDFIQCLSKCPHETARLEKACNDMMALYPTVSYPL
EVLCLHFIQLGTLSEEALHCFSRLLEMDASSGPGIIGFGIKCLQEKKYKEAVKSLTEGLQ
KTSQCPAAWHYLAEAQMKIHKHRDAVLSCNQALETLGTPEGPSLRWKNLILQLKAEALIK
IADADAAEEAIKALEQIVDASSDPVVLAIRGQAYLNKGLMDQASKISQELLLSHPELAES
HALEGFIHYSQKNYEQAERSFLNAIERKAETAEYHQYLGLTYWFMSDETKKDKGKTLTQF
LKAAKLDSYLGSVFRYLGNYYRDIAGDKSRARGCYKKAFELDGTDEESGTAAVDLSVELG
DVDTALSILNEVTEKASTGTAKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDSNCWE
SLGEAYLSRGSYSTALKSFRKASELNPGLVYSIYRAAAVEQILGKYENAIATYQQILKET
EDYVPALKGLGECYLMLARSALDNYLDRKAVDYIEQALEFFTRATKHRPDVSCLWKLLGD
TCTSVHVISPTKVNVQVLGSLLGKNAGKQTLKKSELLGLGGRCYGRALKLMPLPSIWCDL
GINYYRQAEHLTAVGTDMNGISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLATGNIEQAHEAFKVAQSLEPSYLLCWIGQA
LIAETVGSYDTMDLFRHTTELSMHTEGAKGYSHWVCSTLQDKSNRNTELYLYNIVQMNAI
PAAQVVLSKYTERNPDDASAFTMLGYLNEYLHLKRQAVDAYERAASLLKNSEDTEKYNTA
MQNYGRSLCALGQCDKAIEVYTSTPLTEFDGIVGIALAYFKKGLLQESIKAYEKALSVAE
SEQDKAHILTALAIIEYKQNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHEKGDDGIYERCLIASAVYALQGRNVVVQREVSKAIHSNPDNPALWSLLSRLV
PLYASQKAKGGAVAGSVAHVLDVNHGKEVLLNIAVNQLAAGCHMLEDEKNNPLKNIQKAI
HLCPDNPAAWAVLMAACHAENTIVCLNNTQPKRTGLEMTLVSTVSAKTGENNLPHNYIRT
LEDWCLCQAITSLEESGKLSEAEALCTKGLKSCPEHPALFLLLRQVQCRQLLQSHKELPD
TILEELRKTVMTSSTSVAAWQWLAKVYQSQRMMVGAEMCYRKSLQLASQQGSWNGKLSSL
LGLAMLALEICMANVSNEHWPSLVQEATTEALKLSSCPLAALLQALLQYNRKMGARETRR
MLERVVYQPGNPETIASVARWYLLQHLYAKDDYELIDVLIENAKANGDVRALELNEKLSG
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattaaagagtgctagggatgcaatacgaaataaa
gaatataaggaagccttgaaacattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcttgggtatttattggcctggcagctgctgagttagagcagcctgatcaggccaaa
ggagcatataagaaggctattgaacttgaaccaaaccagttactggcatggcagggatta
gcaaatttatatgagaaatccaaccaaacagatgtcaaaggagacttagcagatgtgtac
caaaagctcttggaactctatgaaagtggtgacaagcagaaatggtgtgatgtatgtaac
aagcttgtggaactatatcatcaagaaaagaaatatttagaggtggctgaaacatggcag
aaactgatacaaaggaaacaggaggaaggtgcagaaaaggcagagctgcatcaactttgg
aagaagatgatccagttactgaaagacagtgcacaaaaccaggataataagactgagcag
tcgcttttgactgcgtttgaacatgccatgaactctgctgacactgtacctggtgaagac
caccaaaatctttacaaggactttattcagtgcttgtcaaaatgtcctcatgaaacagct
aggttggagaaggcctgtaatgatatgatggctttgtatcctactgtgagttatccttta
gaagtactttgcttgcactttattcaattaggtactttgtcggaagaggccctgcactgt
ttttctaggcttttggagatggatgcaagtagtggtccaggcatcattggatttggtata
aaatgcctgcaagaaaagaaatacaaggaggctgttaagagtcttactgaaggtttgcag
aagactagccaatgtccagcagcatggcattatttggcagaggcacagatgaagattcac
aaacacagggacgctgtcctgtcctgcaatcaagctcttgagactcttggaactcctgag
ggtcctagtcttcggtggaagaaccttatccttcagttgaaagcagaggctttgattaaa
atagctgatgctgatgctgcagaagaagccattaaagcacttgagcagattgtggatgca
agcagtgatccagtggttttagctatcagaggtcaggcttatctaaacaaaggtttaatg
gatcaagcttcaaagatttcacaagagcttctgttgtcccaccctgaattggctgagtcc
catgctctagagggtttcatccactattcccaaaagaactatgaacaggcagaaagaagt
tttctaaatgctattgaaagaaaggccgaaactgcagagtatcatcagtacctggggctc
acatactggttcatgagtgatgaaacaaaaaaagacaaaggaaaaacactcactcagttc
ttgaaggctgcaaaattggacagctacttgggaagtgtctttcgttatctaggtaactac
tacagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatggaacggacgaagagtctggaacagcagctgtagacttaagcgtggaacttgga
gacgtggacactgctctgtcaatcctgaatgaggtaactgagaaagcgagtactggtaca
gcaaaatgggcctggcttcatcgtggactttactacctgagaactggtcagccgtcacaa
gcagtggctgatttacaggcagctctcagggctgatccaaaggattccaactgctgggaa
tctctaggggaggcttacttgagcagaggtagctattcaacagctctaaaatccttcagg
aaagcaagtgagctgaacccagggctcgtgtacagcatttacagagctgcagcagttgag
cagattctaggcaaatatgaaaatgctatagctacctatcagcaaatcttaaaggagaca
gaagactatgtgcctgcactgaaaggacttggtgagtgctatctcatgctggcaagatca
gcccttgataactatcttgataggaaggctgtggattacatagagcaggctcttgaattt
tttacaagggcaacaaagcaccgtcctgatgtgtcttgcctctggaaactgctcggagat
acctgtactagcgtgcatgttatttcaccaaccaaagtaaatgttcaagttcttggatcc
cttctgggtaaaaatgcaggcaaacagacgctgaagaaaagtgagctgctcggactggga
ggaaggtgttacggcagagctttaaaattgatgcctttgcctagcatatggtgtgatctt
ggaataaattattaccgacaagcggagcacctcacagcagtgggcactgacatgaatggg
atcagtgaactgctagagaagtctttacagtgtctcaaaaaagctgtgaggcttgacagc
aaaaatcatctttattggaatgcacttggtgtagttgcttcctgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaatcaatgttgtt
gcctggacgaacttgggggttttgtatctggcaactggaaacattgagcaagctcatgaa
gccttcaaggtagcccagtctctggagccttcttacttactgtgttggattgggcaggct
cttattgcagagacagtaggtagctatgatactatggatctcttcaggcacaccactgaa
ctcagtatgcatactgagggagcaaaaggctattcccactgggtgtgttcaacgctgcag
gataaaagcaacagaaacacggagctatatctgtacaacattgttcaaatgaatgctatt
ccagcagcccaggtggtcttgagcaaatatacagaaagaaatccagacgatgcgtctgct
ttcacaatgcttggttatttgaatgagtatctccatctaaaaagacaagcagtagatgcc
tatgagagggcagcttcattgctgaaaaactctgaggatactgagaaatataatacagca
atgcaaaactatggcaggtcactgtgtgcccttggtcagtgtgataaggccattgaggtt
tacacctccacacccctaactgagtttgatggcattgtggggatagcgttagcctacttc
aagaaaggactcttacaagaaagtatcaaagcctatgaaaaagccttgtctgttgctgag
tctgaacaagataaagcacatatcctgactgccttggcaataatagagtataaacagaac
aaagtggatgctgcaaagacactgctgtttaaatgctcattaaaggaacctagtacggaa
agtctgaaggctttgtgcacactaggactggtgaagcaggatgctacacttgcaacagca
gccctaaaagaattactgaagcatgaaaaaggggacgatgggatttatgagaggtgcctt
attgcatctgctgtttatgcattgcaaggtagaaatgtggtggtccagagagaagtctcc
aaagcaatacatagtaacccagataatcctgcactctggtctcttctgtctcgactagtt
ccactgtatgcatcacaaaaggcaaaagggggagctgtggcaggaagcgttgcacatgta
cttgatgtaaaccatggaaaggaggtcctgctgaatattgcagttaatcaattggcagca
ggatgtcacatgttagaagatgagaaaaacaatcctctgaaaaatattcagaaggcaatc
cacctctgtccagataatcctgctgcttgggcagtgctgatggcagcctgtcatgctgaa
aacaccattgtctgtctaaacaacactcagccgaagcgaacgggtctagagatgacactt
gtatctacagtttcggccaaaactggagaaaataaccttccacataattatatccggact
cttgaagactggtgcctatgtcaagctattaccagtctagaggagtctggtaaactctca
gaagctgaagctctttgtaccaagggtttaaaaagctgccctgagcacccagctctgttt
ttgcttttgagacaagttcagtgtaggcagctgctgcagtctcacaaagaacttccagac
accatcctggaggagcttcgcaagacagtcatgaccagttcgacttcagttgcagcctgg
caatggctggcaaaagtgtatcagtctcaaagaatgatggttggagcagagatgtgttac
agaaagagtctgcagttggcatcacagcagggcagctggaacgggaagttatccagtctg
ctcgggctagctatgctcgcactggaaatctgcatggcaaatgtctcaaatgagcactgg
ccatccttggttcaggaggcaacaactgaagctttgaaactttcttcttgccccctggca
gctctcctacaagcactgctgcagtataatcgcaaaatgggagcaagggagactcgtcga
atgttggaaagagtggtatatcaaccggggaatccagaaaccatagcgtcagtggcacgc
tggtacctcctgcaacatctgtatgccaaagatgattatgaattaatagatgtgcttata
gaaaatgccaaagctaatggagatgttagagctctggaactaaatgagaaattatcagga
agtgcctag
DBGET
integrated database retrieval system
