Calonectris borealis (Cory's shearwater): 142081969
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Entry
142081969 CDS
T11211
Symbol
RAPGEF2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04010
MAPK signaling pathway
cbor04517
IgSF CAM signaling
cbor04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
142081969 (RAPGEF2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142081969 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
142081969 (RAPGEF2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RA
cNMP_binding
PDZ
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
142081969
NCBI-ProteinID:
XP_075005505
LinkDB
All DBs
Position
4:complement(46996386..47183188)
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AA seq
1659 aa
AA seq
DB search
MASYVDNSFRQAVMKNPAERSPQDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPVGKPPLPRGYHTECTKP
QLPADFTKLHLTDSLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEAGDMDLSGLP
ETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDGRTEILCMGNSF
GVSPTMEKEYMKGVMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTAERLTMHLVEEHSVVDPTFIEDFLLTYRTFLSTPMDVGKKLLEW
FNDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENNLEREKMGGHLRLLNIACAA
KAKRRLITLTKPSREAPLPFILLGGSEKGFGIFVDSVDFGSKATEAGLKRGDQILEVNGQ
NFENIQLSKAMEILRNNTHLSITVKTNLFVFKELLTRLSEEKRNGAPHLPKIGDIKKASR
YSIPDLAVDVEQVIGLEKVNKKSKANTVGGRNKLKKILDKTRISILPQKPYNDIGIGQSQ
DDSIVGLRQTKHIPPALPVSGTLSSSNPDLLQSHHRILDFNTTPDLPDQVLRVFKADQQS
RYIMISKDTTAKEVVIQAIREFALTATPDAYSLCEVSVTPEGVIKQRRLPDQLSKLADRI
QLSGRYYLKNNMETETLCSDEDAQELLRESQISLLQLSTVEVATQLSMRNFELFRNIEPT
EYIDDLFKLKSKTGCINLKKFEEVINQETFWVASEILRETNQLKRMKIIKHFIKIALHCR
ECKNFNSMFAIISGLNLAPVARLRTTWEKLPSKYEKLFQDLQDLFDPSRNMAKYRNVLNS
QNLQPPIIPLFPVIKKDLTFLHEGNDSKVEGLVNFEKLRMIAKEIRHVGRMASVNMDPAL
MFRTRKKKWRSLGSLSQGSTNAAVLDVAQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQ
YLSNLDLEMDEESLQTLSLQCEPATNTLPKNTGDKRSGKSETSPVAPRAGIQQKVQQQQQ
HKVNQALQVPAVSLYPSRKKVPVKDLPPFGINSPQALKKILSLSEEGSLDRHKKQSEDTV
SSASSQLSSPPTSPQSSPRKGYTLAPSGTVDNFSDSGHSEISSRSSIVSNSSFDSMPVSL
HDERRQRHSVSIVETNLGVGRIDRRIVIEPDQYSLGSYAPLSESRGLYAGATVLSSPSTE
ELSQDQGDRASLDAADSGRGSWTSCSSGSHDNIQTIQHQRSWETLPFGHAHFDSSGDGAG
LWASGSHVDQLMFPDHGTKYGRQSQGREGLDQAQSRASWASSTGYWGEDSEGDTGTIKRR
GGKDVSIEAETSSITSVPAEESKPAPVPTHIAVSSSSTKGLIARKEGRYREPPPTPPGYV
GIPIAEFAEGGSHPTRKPPDYNIALQRSRMVARTCETHGTSTPQQQSHGLSTSRPVNKPQ
WHKPNESDPRLAHYPSQGFSTEEDDSGEVKAANPSSTQM
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctacgtggataacagcttccgccaggcggtgatgaagaacccggcggagagg
agcccccaggatttggagattgtgtattcctatttacatggaatggaagccttgtctaat
ctgagagagcatcagctaagactgatgtgtgaaactgttagatatgaaagacatgaagca
aatgaagttctgtactaccctgatgatattggtacctgttggtatatcctgctgtctggt
tcagtcttcattaaagagtctatgtttcttccaaggagcagttttggcaagcgttctgca
ggaagcttcaggcgtggctgtgaatgcattgttttagagccatctgaaatgattgtggtt
gattacatggatgaaaatgaggagtattttcaacgtcaagcttctcataggcaatctcga
agaagatttaggaaaatcaaccaaaaaggggagcgacaaacaattattgatactgttgac
ccttatcccgtggggaagccacctctacctagaggctaccatacggaatgcactaaacct
cagcttcctgcagatttcacaaagctgcaccttactgacagtctccacccacaggtgacc
cacgtttcatctagtcactcaggatgtagcatcactagtgattcaggaagcagcagcctt
tctgatatctaccaggctacagaaagtgaggctggtgatatggatctcagtgggttgcca
gagacagcagtggattctgaggatgatgatgatgaagaagacattgaaagggcgtcggat
cctttgatgagtagggatattgttagagactgcttggagaaagacccaatagacaggaca
gatgatgacattgaacaactactggaattcatgcatcaattgcctgcttttgccaacatg
acaatgtcagtgaggagagagctctgtgctgtaatggtgtttgcagttgtggagagagca
ggaactattgtactaaacgatggagaagagctggattcctggtcagtcattttgaatggc
tctgtggaggtgacgtaccctgatggaagaacagagatactctgcatggggaacagtttt
ggtgtttcccctaccatggagaaggaatatatgaaaggagtgatgagaaccaaagtggat
gactgccagtttgtttgtatagcccagcaagattattgccgcatcctcaatcaagtggaa
aagaacatgcagaaggtagaagaggaaggggagattgtgatggtgaaggagcacagggag
cttgatcgtactggcacaagaaaaggtcacattgtcatcaagggaacagctgaaaggtta
acaatgcatttggtggaagagcactctgtggtagacccaacatttatagaagacttcctg
ttgacgtatcggacctttctttccacccccatggatgtgggcaagaagttgttggagtgg
ttcaatgaccccagcctcagggataaggttacacgggtagtattattgtgggtgaacaat
cacttcaatgattttgaaggagatcctgctatgactcgatttctggaagaatttgagaac
aatttggagagggagaaaatgggtggacatttgaggctgttaaatattgcttgtgctgct
aaagctaaacgaagattgataaccttaacaaagccatctcgagaagcccctttgcctttt
atcttgctgggagggtcagaaaagggatttggaatctttgttgacagtgtagattttggt
agtaaagctacagaagcaggcttgaaacgtggagaccagatactggaagtgaatggtcaa
aactttgaaaacattcagctgtcaaaagccatggaaatccttaggaataacactcatctg
tctatcactgtgaaaaccaatttatttgtttttaaagaactcttaacacggttgtcagag
gaaaaaagaaatggtgctccccacctgcctaaaattggtgatattaaaaaggcgagtcgt
tattccatcccagaccttgctgttgatgtggagcaggtaataggattagaaaaagtgaat
aagaaaagtaaagccaacacagttgggggaagaaataaattaaagaagatacttgacaag
actcgaattagtattctgcctcagaaaccatacaatgacattggaattggccagtctcag
gatgacagcattgtgggactgaggcaaacgaagcacattcctcctgctttacctgtcagt
ggaaccctgtcatccagtaatcccgatctactgcagtctcatcaccgcatcttagacttc
aatactactccagacttaccagatcaagttctgagggttttcaaggcagatcagcaaagt
cgctacatcatgattagtaaggacacaacagcaaaagaagtggtcatccaggctatcagg
gaatttgctctcactgcaactcctgatgcatattcactatgtgaagtctctgtcacacct
gagggcgtaatcaagcaaaggaggcttcctgatcagttatccaagcttgctgacaggata
cagctgagtggcaggtattacctgaagaacaacatggaaacagaaactctttgttcagat
gaagatgctcaagagttactaagggaaagtcaaatttccctactacagctcagtactgtt
gaggtggctacccaactctccatgagaaactttgagctattccgtaatattgaacccacg
gaatacatagatgacttgtttaaactcaaatcaaaaacaggttgcattaatctaaaaaag
tttgaagaggtgataaatcaagaaacattctgggtggcttctgagattctaagagaaacc
aaccagctgaaaaggatgaagatcattaagcatttcattaagatagcactacactgcagg
gaatgcaagaacttcaactcaatgtttgccatcattagtggcctgaatttggcaccagtt
gcaaggctccgaactacttgggaaaagcttccaagcaagtatgaaaaactgtttcaagat
ctacaggacttgtttgatccatctaggaatatggcaaagtatcgtaatgtccttaacagc
caaaacctacagccccccattatccccctgtttcctgttatcaaaaaagaccttacattc
cttcatgaaggaaatgattcaaaagtggagggcttggtcaattttgagaagctgagaatg
attgcgaaggagatacgccatgttggtcgcatggcgtctgtgaacatggatcctgcttta
atgtttagaacgaggaagaagaaatggaggagtttggggtctctcagccagggcagtacg
aatgcagccgtgctggatgtcgcacaaacggggggtcataaaaagcgggtccgtcgcagc
tccttccttaatgctaaaaaactgtatgaagatgctcagatggcacggaaagtaaagcag
tatctctcaaacttggatctggaaatggatgaagagagccttcagacgctgtctctgcag
tgtgagccagccaccaacacattgccgaagaatacgggagacaagcgatctggaaaatct
gaaacgtcaccggtggctccccgggcaggcatccagcagaaagtgcagcagcagcagcaa
cataaagtaaaccaagcattgcaggtccctgctgtatctctttatccctctcgcaagaaa
gtgccagtcaaagacctcccaccattcggcattaactccccgcaagctttaaagaagatt
ctttcattatctgaagaaggaagtttggatcgtcacaagaaacaatctgaagacacagtc
tcaagtgcatcttcacagctgtcttctcctcccacttcaccacagagctctcccaggaaa
ggctatactttggctcctagcggcacggtggataacttttcagattctggtcacagcgaa
atttcttccagatctagtattgtcagcaattcctcttttgactctatgccagtctccctg
catgatgagaggagacagagacattctgtcagcatcgtggagacaaatcttggtgtggga
aggattgatagaagaatcgtgattgaaccagatcaatacagcttaggctcatatgcacca
ctgtcagagagcagaggcctgtatgctggagcaactgtgctttcttctcctagtacagaa
gaactgtcacaggatcagggggacagagcttcgctcgatgcagctgacagtggccgtggt
agctggacttcttgttcgagtggttctcatgacaacatacaaaccatacagcaccagaga
agctgggagactctgccttttggacatgcgcatttcgatagttcaggcgatggggcagga
ctgtgggcctcgggcagtcatgtggaccagctgatgttccccgatcatggcacaaagtat
ggcaggcaaagtcaaggtagggaaggccttgatcaagcacagtccagagcaagctgggca
tcctcaacaggctactggggagaggactcggaaggtgatacaggtaccataaagcggagg
ggtgggaaggatgtttcgattgaagctgaaaccagtagcataacatctgtaccagcagag
gagtcgaagccagctcccgtgcccactcatatagcagtatcatcaagtagtacaaagggg
cttattgcacgaaaagagggtcgatatcgggaaccacctccaactcctcctggttatgta
ggaatacctattgctgagtttgcagaaggtggttcccatccaaccagaaagcctccagat
tacaacatagcgcttcagaggtctagaatggtggcacggacatgtgagacacatgggaca
tcaactccgcagcagcagtcgcatggcctttcaactagcaggcctgtgaacaaacctcag
tggcataaaccaaatgagtcagatccacgtcttgctcactatccgtctcaagggttttcc
acagaggaagatgactccggagaagtgaaggctgccaatccgagtagtactcaaatgtga
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