Calonectris borealis (Cory's shearwater): 142083555
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Entry
142083555 CDS
T11211
Name
(RefSeq) sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbor04040
]
142083555
Ion channels [BR:
cbor04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
142083555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
142083555
NCBI-ProteinID:
XP_075009201
LinkDB
All DBs
Position
6:21157748..21214600
Genome browser
AA seq
2018 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRVNEEKAKKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISYFNSSV
GENGTFINTTMTTFNWDEYIEDRNHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDGEEFHKSESEDSIKRKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVPPLPANGKMHSTVDCNGVVSLVGG
PPALTSPTGQLLPEVMIDKAATASNGTTTETDLRKRRSSSYHVPMDYLTDPNARQRAMSI
ASMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHVVNLIVMDPFVDLAITI
CIVLNTLFMAMEHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFD
GFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAV
ARIQKGIDYVKRKVREFIQKAFVRKQKVLDEIKPLEDLNNKKDSCISNHTIVEIGKNLAY
LKEGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESD
LEESKEKLNASSSSEGSTVDIGLPPEGEQPEAEPEEALEPEACFTEGCVRRFKCCQVSVE
DGKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADK
VFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCV
NTTTDERFDISQINNYSQCEELIKNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDI
MYAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVT
MMVETDDQSEDMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIV
GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSG
EPDCDPQKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESA
EPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMV
SGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEV
SAVIIQRAFRRHLLRQKVKKVSCIFNQDKGKDEDDLPMKEDMIMDKLNENSTPEKTDMTP
STTSPPSYDSVTKPDKDKYEKDKSEKEDKGKDSRESKK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagcttccgctatttcacaagagaa
tcacttgcagctattgagcagcgtgtcaatgaagaaaaagctaaaaaatccaaacaagaa
cgcaaagatgatgacgatgaagatggcccaaagccaaatagcgacttggaggcaggaaag
acacttccgtttatttacggtgacatacctccaggaatggtgtccgagcccttggaagac
ctggacccatattatatcaataaaaaaacctttatagtattgaataaagggaaggcaata
ttccgattcagtgccacctctgccctgtacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgt
ttagaagattttacatttcttcgagacccatggaattggctagatttcactgtcattaca
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaatcccaggcttgaagactatcgtgggagcc
ctaattcagtctgtgaagaagctctcagatgttatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacctgaggaataaatgcctgcag
tggcctccagacaattctacttttgaaacaactgttatttcctactttaatagctctgta
ggtgaaaatggtacatttattaatacaacaatgacaacatttaactgggatgagtacatc
gaagacagaaatcatttctacttcttggaaggacaaaatgatgctctgctgtgtggcaat
agctcagatgcgggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacactgcgtgctgctgggaaaaca
tacatgatattttttgttttggtcattttcctgggttctttctacctgattaatttgatc
ctggctgtggttgccatggcctatgaagaacagaatcaagcaaccatggaagaagcagaa
cagaaagaagcagaatttcagcaaatgctggaacaactgaaaaagcaacaggaagaagct
caggcagcagcagcagctgcagcagctgactcaagagattatagtggagtaggtggaata
ggtggattctccgaaagttcttctgaggcatcaaaactgagctcaaaaagtgctaaagag
aggaggaatagaagaaagaaaaaaaagcaaaaagaacaatctgaaggcgaggagaaggat
ggggaagaatttcacaaatctgaatcagaggacagcatcaaaaggaaaggtttccgattt
tccattgaggggaatagactgacatacgaaaagagattctcttccccacaccagtctttg
ctgagcattcgtggctccctgttttccccaaggcgcaatagcagaacaagtcttttcagc
ttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgctgatgatgagcacagc
acttttgaagacaatgagagcagaagagattctctctttgttcctcatagacatggtgaa
cggcgcaacagtaacattagtcaggccagtaggtcatccaggacagtacctccacttcca
gcaaatgggaagatgcacagcaccgtggattgcaatggagtagtttctttagtcggtggg
ccgccagctctgacatcacctactggacagcttctgccagaggtgatgattgataaagca
gccactgctagcaatggcacaactacagaaactgacttaagaaagagacggtctagttct
taccatgttcctatggactacctaacagatcctaatgcaaggcaaagagccatgagtata
gccagcatgcttacaaacacaatggaagaactagaagaatccagacagaaatgcccgcca
tgctggtacaaatttgctaacacttgcttgatttgggactgctgtactccttggctgaaa
gtcaaacatgttgtaaatttgattgtgatggacccatttgttgatctggccattactatc
tgcattgtcctaaacaccctgttcatggccatggagcactatccaatgacagaacagttt
agtggtgtgctttcagtaggaaaccttgtgttcactggaattttcacagcagaaatgttt
ctcaagataattgccatggatccttattattatttccaagagggctggaatatttttgat
ggttttattgtgagtcttagtttaatggagcttggccttgcaaatgtagaaggattatct
gtccttcgatcattccgattgcttcgagttttcaaattggcaaaatcttggccaactcta
aatatgctgattaagattattggcaactcagtgggggctttgggtaatctgaccctagtg
ctggccatcattgtgttcattttcgctgtggttgggatgcagctgtttgggaaaagctac
aaggaatgtgtctgcaagatctctagcgactgtgaacttccacgctggcacatgcatgac
tttttccactctttcttgattgtgtttcgagtgctgtgtggagaatggatagaaacgatg
tgggattgcatggaggttgcaggtcaaactatgtgccttacggtcttcatgatggtcatg
gtgattggaaacctagtggtactcaacctctttttggcattgctgctgagctcatttagt
tcagacaaccttgctgctacagacgatgataatgaaatgaacaatctccagattgctgtg
gcaaggattcagaaaggcatagattatgtgaagagaaaagtgcgtgaattcatccaaaaa
gcctttgtcagaaagcagaaagttttagatgaaatcaaacctcttgaagacctaaacaac
aaaaaagacagctgtatttccaaccacacaatagtagaaataggtaaaaaccttgcctat
cttaaagaagggaatggaactaccagtggcataggcagcagcgtggaaaaatatgttgtt
gatgaaagtgattacatgtcattcataaacaacccaagtctcactgtgacagtgccaatt
gctgttggggaatcagattttgaaaatttaaatacagaggagttcagtagcgagtcagac
ctggaagaaagcaaagagaaattaaatgcatccagttcatcagaaggcagtacagttgat
atcggactacctccagaaggggaacagccagaagcagaacctgaagaagctctggagcca
gaggcttgttttacagaaggctgtgtgcggagattcaaatgctgtcaagtcagtgtagag
gatgggaaagggaaaatctggtggaatcttaggaaaacctgctataagattgttgaacac
aactggtttgagaccttcattgtcttcatgattcttctcagcagcggtgctctggcattt
gaagatatatacatagagcaacgtaaaactatcaagaccatgctggaatatgctgacaaa
gtttttacttacatcttcattctggaaatgcttttaaaatgggtggcttatggctttcaa
acctatttcactaatgcgtggtgctggctggacttcctgattgtcgatgtctctttggtt
agcttaacagctaatgccttgggctactcagaacttggtgcgattaaatcccttaggaca
ctaagagctttgagacctctgagagccttgtcgcgatttgaagggatgagggtggttgtg
aatgccctcttaggagcgattccatccattatgaatgtgcttcttgtttgccttatattc
tggctgatcttcagtatcatgggagtaaatctatttgctggaaaattttactactgtgtt
aacactacaactgatgagagatttgatatcagccaaatcaacaactacagtcaatgtgag
gagctcataaaaaacaatgaaactgcccgatggaagaatgtgaaggttaactttgataat
gtaggccttggttatctttctctgcttcaagtggctacatttaaaggatggatggatatc
atgtacgcagctgtggattctcgtaatgttttggatcagcctaagtatgaagataacctg
tacatgtatctttactttgtcatctttatcatttttggatcattctttaccttgaacctt
ttcattggtgtcatcatagacaatttcaaccagcaaaaaaagaagtttggaggtcaagac
atttttatgacagaagaacagaagaaatactacaatgcaatgaaaaaattgggttcaaag
aaaccacaaaagcctatacctcgaccagcaaacaaattccaaggcatggtctttgatttt
gtaacaaaacaagcatttgatatcagtatcatgatacttatctgccttaacatggtcaca
atgatggtagaaacagatgatcagagtgaagacatggaaaacattttatattggattaac
ctggtgttcattgtccttttcactggagaatgtgtcctgaaactgatttcacttcgccat
tactactttactataggctggaatatttttgattttgtggttgtcattctctccatagta
ggtatgttcttagctgagatgattgagaaatattttgtgtcccccacactattcagagtc
atccgacttgccagaataggtcgaatcctgcgtctcattaaaggcgctaagggaatccgc
actctgctttttgctttgatgatgtctcttcctgccttgttcaacattggtctgctgctg
ttcctggtcatgtttatctatgcgatatttggcatgtccaactttgcctatgttaagaga
gaagttgggattgatgacatgttcaactttgaaacgtttggcaacagcatgatctgccta
tttcaaattaccacatctgctggctgggatggtttgctagccccaattcttaacagtggg
gagccagactgtgacccccagaaagatcatccggggagctctgtcaaaggtgactgcggc
aacccttctgttgggattttcttctttgtcagctacattatcatatcatttctggtagtg
gtgaacatgtacattgctgtgattttggagaacttcagtgttgccactgaagaaagtgct
gaacccttgagtgaggatgactttgagatgttctatgaagtctgggagaagtttgatccc
gatgcaacacaattcatagagttcagtaaactatcagattttgcagcttctctagatcct
cctcttcttatagcaaaaccaaacaaagtccagcttattgcaatggatctgcccatggta
agcggcgacagaattcactgccttgacatcttgtttgctttcacaaagcgtgttttgggg
gaaagtggggagatggacgccctcagaatacagatggaagatcggtttatggcagccaat
ccttctaaagtctcctatgaaccaattacaaccacattaaaacgaaaacaggaggaagta
tctgctgtcattattcagcgtgctttcagacgtcatcttttaaggcaaaaagtcaaaaaa
gtttcatgtatatttaatcaggataaaggcaaagatgaagatgatctgcccatgaaagaa
gatatgattatggataaactaaatgagaactctactccagaaaaaacagatatgacccca
tccacaacctccccaccatcctatgatagtgtaacaaagccagacaaggataaatatgaa
aaagacaaatcagaaaaagaagataaaggtaaagacagcagggaaagtaaaaagtaa
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