Calonectris borealis (Cory's shearwater): 142083905
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Entry
142083905 CDS
T11211
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbor04040
]
142083905
Ion channels [BR:
cbor04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
142083905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
IQ
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
142083905
NCBI-ProteinID:
XP_075010047
LinkDB
All DBs
Position
6:complement(21051303..21127866)
Genome browser
AA seq
2011 aa
AA seq
DB search
MAQALLVPPGPESFRYFTRDSLAAIEKRSAEEKAKKPKQDHTDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPIRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISYFNTTM
DENGTFVNMTVSTFNWKDYIEDETHFYILEGQRDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQATAAVAAASVASRDFSGVG
GLGELLESSSEASKLSSKSAKERRNRRKKRRQKEMSEAEDKGDIDKFPKSESEDSIRRKS
FRFSTEGSQLTYEKRFTSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRAKDIGSENDFADD
EHSTLEDNESRRDSLFVPNRHGERRNSNISQASVSSRMVPALPVNGKMHSTVDCNGVVSL
VGGPSTLTSPTGQLIPEGTTTETEIRKRRLSSYQISMEMLEDSAARQRAMSIASILTNTM
EELEESRQKCPPCWYRFANTFLIWDCWSPWLKVKHIVNLVVMDPFVDLAITICIVLNTMF
MAMEHYPMTEQFSSVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSL
MELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKISSDCVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGID
YVKKKIQEFIQKAFVRKQKALEEIKALEELNKKKDSCISNHTAVEISKDLNYLKDGNGTT
SGVGTGSSVEKYIIDENDYMSFINNPGLTVTVPIAVGESDFENLNTEEFSSESDMEESKQ
KLNASSSSEGSTVDIAPPGEGEQAEIESEEALEPEACFTEGCVQKFPCCQVSIEDGKGKI
WWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIF
ILEMLLKWVAYGFQIYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGE
MFDVSDVNNYTQCEELIKNNQSARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVD
SRDVEDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPVNKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETD
DQSKEMETILSRINLVFIILFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAE
MIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFI
YAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDP
QKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSED
DFEMFYEVWEKFDPDATQFIEYSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIH
CLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQ
RAYRHYLLRQKVKKVSSIYNRNKNKEGDGPVIKEIIIDKLNGNSTPEKTDESSSTTSPPS
YDSVTKPDKEKYEKDKAEKNYKGKDVRENKK
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactgctggtaccaccaggacctgaaagcttccgctattttactagagat
tctctcgcagctattgaaaagcgttctgcagaagaaaaagctaaaaagcccaagcaagac
catacagatgatgatgacgaaaatggtccaaaaccaaacagtgacttggaggcaggaaag
acactgccatttatttacggtgacatacctccaggaatggtatctgaacctttggaagac
ctggacccatattatatcaataaaaaaactttcatagtattgaataagggaaaggcaatt
ttccgattcagtgccacatctgccttgtatattttaactccttttaatcccatcagaaaa
attgctatcaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccggactggacaaagaatgtagagtat
accttcactggaatttacacctttgaatcacttatcaaaattcttgcaaggggcttctgc
ttagaaggttttacttttctgcgagacccgtggaactggcttgacttcagtgtcatttta
atggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcctaaagactatcgtgggagcc
ctaattcagtctgtgaagaagctctcagatgttatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattctacttttgaaacaactgttatttcctactttaataccacaatg
gatgaaaatggtacatttgttaatatgacagtgagcacatttaactggaaggattacatt
gaggatgaaactcatttttacattttggaaggacaaagagatgccctactttgtggtaat
agctctgatgcagggcagtgtccagagggatatatatgtgtgaaagctggtagaaacccc
aactatggttacacaagttttgacaccttcagttgggcttttttgtcactctttcggcta
atgactcaggacttctgggaaaacctgtatcagctgacactacgtgctgctgggaagaca
tacatgatattttttgttctggtgatttttctgggctctttctatctgatcaacttgatc
ctggctgtggtcgccatggcctacgaagaacagaatcaagcaaccatggaagaagcagag
cagaaagaggcagaatttcaacagatgctggaacaactgaagaagcaacaagaagaagct
caggcaacagcagcagtggcagcagcatcagttgcatcgagagatttcagtggtgtaggg
ggattaggagaactcttggaaagttcttcagaagcatcaaagttgagctcaaagagtgct
aaagaaagaagaaacagaaggaagaaaagaagacagaaagaaatgtctgaagcagaggac
aaaggagatatcgataagttccccaagtccgagtcagaagacagtatcagaaggaaaagt
ttccgcttctccacagaaggaagtcaactgacatatgaaaaaaggttcacatctccccac
cagtctttgctaagcattcgtggttccctgttctcaccaaggcgcaacagcaaaacaagc
attttcagtttcagaggtagagcaaaggatataggatctgaaaatgactttgctgatgat
gagcacagcactcttgaagacaatgagagcagaagagattctctctttgttccaaataga
cacggagaacggcgcaacagtaatattagtcaggcgagtgtgtcatctagaatggtacca
gcccttcccgtaaatgggaagatgcacagcactgtggattgcaatggagtagtttccttg
gttgggggaccttcaactctaacttcacctaccggtcagcttataccagagggcaccact
acagaaacagaaataagaaaaagaagactgagttcttatcaaatttccatggaaatgctg
gaagattctgcggcaagacaaagagcaatgagtatagccagcatacttacaaatacaatg
gaagagcttgaagaatccagacagaaatgcccaccatgctggtacagatttgcaaatact
ttcttgatctgggattgctggagtccatggttaaaagtaaaacacatcgtcaatttagtt
gtgatggatccatttgttgatcttgctataactatttgcattgttttaaacaccatgttt
atggccatggaacattacccaatgacagaacagtttagcagtgtcctttctgtggggaac
ctggtattcactgggatatttacagcagaaatggtactaaagataattgccatggaccct
tattattatttccaagaaggctggaatatttttgacggtattatcgttagccttagttta
atggagcttggtcttgcaaatgttgaaggattatctgttcttcggtcattcagattgctt
cgagtttttaagttagcaaaatcttggccaacgctaaatatgctgataaaaattattggc
aactcagtgggggctctggggaatctgaccctagtgctggccatcattgtgttcattttc
gctgtggttgggatgcagctgtttgggaaaagctacaaggaatgtgtctgcaagatctcc
agtgactgtgtgcttccacgctggcacatgcatgactttttccactctttcctgattgta
tttcgagttctgtgtggagaatggatagaaacgatgtgggactgcatggaggttgcaggc
caaaccatgtgccttattgttttcatgctggtcatggtgattggaaacctagtggtattg
aacctgtttctggccttgctgctgagctcatttagttcagacaaccttgctgctaccgat
gatgataatgaaatgaacaatctccagattgctgtggcaaggattcagaagggaatagat
tacgttaaaaaaaagatacaggagttcatccaaaaagcctttgttagaaagcagaaagct
ttagaggaaatcaaagcacttgaagagctaaacaagaagaaagacagctgcatttccaat
catactgctgttgaaataagcaaagatctgaattatcttaaagatgggaatggaaccacg
agtggtgtaggcacaggcagcagtgtggaaaaatacataatcgatgaaaacgattacatg
tcattcataaacaacccaggcctcactgttacagtgccaattgcagttggagaatcagat
tttgaaaatttaaatacagaagaatttagcagcgaatctgatatggaagaaagcaaacag
aaactaaatgcatccagttcatcagaaggcagcacagttgatattgctcctcctggagag
ggcgagcaagcagaaattgaaagtgaagaagctcttgaaccagaagcctgttttacagaa
ggttgtgtgcagaaatttccatgttgtcaagtaagtatagaggatggcaaaggaaaaatt
tggtggaatcttagaaaaacctgctacagcatagttgagcacaactggtttgagactttc
attgtcttcatgattctcctcagcagtggagcactagcttttgaagatatatatattgaa
cagcgcaaaactatcaagaccatgctggaatatgctgacaaagtttttacgtatattttc
attttggaaatgcttttaaaatgggtagcatatggttttcaaatatatttcactaatgcc
tggtgctggctggacttcctgattgttgatgtctcattggttagtttaatagccaatgct
ttgggctattctgaacttggtgccattaaatcgcttcggacattaagagctttaagacct
ttaagagccttgtcacgatttgaaggaatgagggtggttgtaaatgcccttgtaggagca
attccatctatcatgaatgtattgctggtttgtcttatattctggctcatcttcagcatc
atgggagtaaatctgtttgctggcaaattctatcattgtgtcaacaccacaactggtgag
atgtttgatgtcagtgatgtcaacaattatactcagtgtgaggaactcataaaaaacaat
caaagtgcccgctggaaaaatgtgaaagtaaactttgataatgtaggagctggatatctt
gctctgcttcaagtagctactttcaaaggatggatggatattatgtatgctgctgttgat
tcacgagatgtagaagatcaacctaagtatgaggacaacttgtatatgtatctttatttt
gtcatctttatcatatttggatcattctttaccttgaaccttttcattggtgtcattata
gacaacttcaaccaacaaaaaaagaagtttggaggtcaggatatatttatgacagaagaa
cagaagaaatattacaatgcaatgaaaaaactgggatccaaaaagccacagaaacctata
ccgaggccagtgaacaaattccaaggcatggtctttgattttgtaaccaaacaagtattt
gacatcagcatcatgatactcatctgccttaacatggtcacaatgatggtagaaacagat
gaccagagtaaagaaatggaaacaattttatcccggattaaccttgtgttcattatcctt
ttcactggagaatgtgtcctgaaattgatttcacttcgccattattacttcactataggc
tggaatatttttgatttcgtggttgtgattctctccatagtaggtatgttcttagctgag
atgattgagaaatattttgtgtcccccacactattcagagtcatccgacttgccagaata
ggtcgaatcctgcgtctcattaaaggcgctaagggaatccgcactctgctttttgctttg
atgatgtctcttcctgccttgttcaacattggtctgctcctgttcctggtcatgtttatc
tatgcgatatttggcatgtccaactttgcctatgttaagagagaagttgggattgatgac
atgttcaactttgaaacgtttggcaacagcatgatctgcctatttcaaattaccacatct
gctggctgggatggtttgctagccccaattcttaacagtggggagccagactgtgacccc
cagaaagatcatccggggagctctgtcaaaggtgactgcggcaacccttctgttgggatt
ttcttctttgtcagctacattatcatatcatttctggtagtggtgaacatgtacattgct
gtgattttggagaacttcagtgttgccactgaagaaagtgctgaacccttgagtgaggat
gactttgagatgttctatgaagtctgggagaagtttgatcccgatgcaacacaattcata
gaatacagtaaactatcagattttgcagcttctctagatcctcctcttcttatagcaaaa
ccaaacaaagtccagcttattgcaatggatctgcccatggtaagcggcgacagaattcac
tgccttgacatcttgtttgctttcacaaagcgtgttttgggggaaagtggggagatggac
gccctcagaatacagatggaagatcggtttatggcagccaatccttctaaagtctcctat
gaaccaattacaaccacattaaaacgaaaacaggaggaagtatctgctgtcattatccag
cgtgcttacaggcattaccttttaaggcaaaaagttaaaaaggtgtctagtatatataac
agaaataaaaacaaagaaggagatggaccagttataaaagagataattatcgataaacta
aatgggaactctactccagaaaaaacggatgagagttcctctacaacttccccaccttct
tatgacagtgtaacaaagccagacaaagaaaaatatgaaaaagataaggcagaaaagaac
tacaaaggtaaagatgtcagggaaaataaaaaataa
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