Calonectris borealis (Cory's shearwater): 142087146
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Entry
142087146 CDS
T11211
Symbol
NUP93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142087146 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142087146 (NUP93)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142087146 (NUP93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
142087146
NCBI-ProteinID:
XP_075017093
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All DBs
Position
12:complement(2422393..2505693)
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AA seq
819 aa
AA seq
DB search
MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKA
SVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKR
TFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQENEPSYVGDLGPPGRSSLDN
VEMAYARQIYIYNEKIVNGHLQPNLVDLCAAVAELDDKNISEMWAMVKQMTDVTLVPASD
ALKVRTNMEVRMEFVRQALHYLEQSYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIK
LPAPVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMHSKD
KRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQ
VCFDDNGASSPQDRLTLSQFQKQLLEDYGESHFAVNQQPFLYFQVLFLTAQFEAAIAFLF
RTERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEAGDPPGVRRLNFVRLLMLYTRKFE
STDPREALQYFYFLRNEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDK
FTSDTKPIINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQIGTPQSNK
ERLKNMAHSIAERYKAQGISAKKSVDSTFYLLLDLITFFDEYHAGHIDRAFDIIEHLKLV
PLSQDCIEERVAAFRNFSDEIRHNLSEVLLATMNILFSQYKRMKGTSPATPARPQRVMED
RDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggatactgaaggctttggagagcttctccagcaggcagaacagcttgcagccgagaca
gagggtatctctgagctccctcatgtagaacgcaacctgcaggagatccagcaggccggg
gagcgcctgcgttcccgcactctgacccgcacttcccaggagactgcagatgttaaagcg
tctgttcttctcgggtctagagggcttgatatatctcacatttctcagcgactagagagt
ctaagtgcagccactacatttgagcctcttgaacctgtgaaggacactgacatccaggga
ttcctgaagaatgaaaaagataatgcattgctgtcagccattgaagagtctaggaaaagg
acttttggtatggctgaggagtatcaccgagaatcaatgctggttgaatgggaacaggtg
aaacaaaggattcttcacactctgcttgcgtcaggggaagatgctctcgatttcacccag
gaaaatgagcctagctacgttggtgatttgggccctccaggtcgcagctcgttggacaac
gtggagatggcgtatgctcggcagatttatatttataatgagaagatagtgaatggacat
ctgcagcctaacctggtggacctttgcgctgctgttgcagaactggatgataagaacatc
tctgagatgtgggccatggtgaaacaaatgaccgatgttaccctggttcccgctagcgat
gccttgaaagtccggaccaacatggaggtgcggatggagttcgtgaggcaggctctgcac
tacctagagcaaagttacaaaaattacacctttgtgacagtctttggaaacttgcaccag
gctcagctgggtggagtcccagggacctaccaactagtccgcagcttcttgaacatcaaa
ctccctgcgcctgtccctggtctccaggatggtgaggtggaaggccatcctgtctgggca
ctgatttactactgcatgcgctgtggagatttgactgcagccatgcatgtggtgaaacgg
gcacagcaccagctgggagagtttaaaacctggttccaggagtacatgcacagtaaagat
aaaagactatctcctgccacagaaaataaactgcgtcttcattacagacgagctctgaga
aataatactgacccatacaaaagggctgtttattgtattattggccgttgtgacattaca
gataaccagagtgaagttgctgataaaacagaagattatctttggctaaaactgaaccaa
gtgtgttttgatgataatggtgcaagttctccacaagaccgactaacattatcacagttc
cagaagcaactgctagaagactatggtgaatcacattttgcagtgaaccagcagcctttc
ctctacttccaagtattgttcttgacagcacagtttgaagctgcaattgcttttctcttc
cggacagagcgcttgcgttgtcatgctgttcatgttgcattggtcctgtttgagttaaaa
ttgctcctgaaatcttctgggcagagtgcacagctattaagccatgaagctggcgaccct
cctggcgtcaggcgtctgaattttgtgcggcttttgatgctttacacccgtaagtttgaa
tcaacggatccaagggaagctctgcagtatttttactttctcaggaatgagaaggacagc
caaggagagaatatgttcttgcgttgcgttagtgaactagtaattgaaagcagagagttt
gatatgattcttggaaagctggaaaacgatggtagtaggaagcctggagtgatagacaag
tttacaagtgacacaaaacccattattaacaaagtggcttctgcagcagaaaataaagga
ttgtttgaagaagctgcaaaactctatgaccttgcaaagaaccctgacaaagttttagaa
ctgatgaacaagctcctcagtcccgttgttccccagattggcactccccagtcgaacaaa
gagcggttgaagaacatggcccattccatcgctgagcggtacaaagctcaggggataagt
gcaaagaaatccgttgactccacgttctaccttctgctagacttaatcacgttttttgat
gaatatcatgccggtcacattgacagggcctttgatattattgaacacttaaagcttgta
cctcttagccaagattgcatagaggagagagttgctgccttccggaatttcagcgatgaa
atcaggcacaatttatctgaggtcctgcttgcaaccatgaatattttattcagccagtat
aagaggatgaaaggcacaagcccagccactcctgccagaccccagcgggtaatggaagac
agggattcgcaacttcgatctcaagctcgtgcgctgataacgtttgctggaatgatccct
tacagaacatcgggagacacgaacgcaagactggtgcaaatggaggtccttatgaattag
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