Ciconia boyciana (Oriental stork): 140649968
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Entry
140649968 CDS
T10948
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04510
Focal adhesion
cboy04512
ECM-receptor interaction
cboy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140649968 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140649968 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
140649968 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cboy00535
]
140649968 (COL9A1)
Proteoglycans [BR:
cboy00535
]
Extracellular matrix (ECM) proteoglycans
Others
140649968 (COL9A1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
140649968
NCBI-ProteinID:
XP_072713929
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Position
3:complement(33598998..33677109)
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AA seq
919 aa
AA seq
DB search
MKSNWKITALFYVCSFLWSFISATIQQQSRLPVILGASQRTDLCPTIRIGQDDLPGFDLI
SQFQIEKAASQGIIQRVVGSTSLQVAYKLGPNVDFRIPTSAIYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVGVNLNGQMKSVEFSYKGVDGSLQTASFLHLPFLFDSQW
HKLMISVEANSVTLFIDCIKIESLNIKPKGKISIDGFAVLGKLKNNPEISVPFEIQWMVI
HCDPLRPQREGCGELPARISQTVIERGLPGPPGPPGPPGPPGVPGIDGIDGERGPNGPPG
PPGPDGDAGKPGSPGLPGEPGADGFTGPDGSRGATGPKGQKGEPGLPGARGLPGKGLLGP
PGPAGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPRGTIGLQDGDPLCPNACPPGRPGH
AGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVGAQGPPGILGIRGITGIMGPKGT
KGARGLDGEPGPQGLPGAPGDQGQRGPLGEAGPKGERGPQGTRGINGLPGPKGESGLPGV
DGREGIPGMPGAKGEPGKPGAPGDAGLQGLPGLPGSPGVKGVPGPKGNRGPPGVPGLMGN
SGKPGEQGPEGEAGPTGPRGPPGSRGEPGPAGPPGLPGKWGPQGDIGLPGLPGPPGLPGG
KGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGAKGAVGNPGEPGSRGPEGSRGL
PGMEGPRGSPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLAQLAASLR
RPEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGERGE
RGFPGRGLKGYPGPRGLPGEPGKPSYGREGRDGERGLPGVAGQPGVPGPPGPPGPPGYCE
PSSCRMQAGQRVGKNMKGP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaactggaaaattacagctttattttacgtgtgtagttttctgtggtctttc
atctcagccaccatccagcaacaatcaagactaccagtcattctgggtgccagtcagaga
actgatctctgcccaacaatcaggattggccaagatgacttaccaggctttgacctgatt
tctcagttccaaatagaaaaagctgcttcccaaggaattatccagagagtagtgggctcc
acttctctacaagtggcttataaattgggacccaatgtagacttcaggatcccaaccagt
gccatatattccaatggattgcccgatgaatattcctttctaactacttttcggatgact
ggggccacacttcagaaatactggactatttggcagattcaagattcttcaggaaaagaa
caagttggagtgaatcttaatggtcaaatgaaaagtgttgagttttcttataaaggagtg
gatggaagtctccaaactgcatcatttttgcatttgcctttcttgtttgactcccaatgg
cacaagcttatgataagtgtggaagcaaacagtgtcacactttttattgactgtattaaa
atagaatccttaaacataaaaccaaaagggaaaatcagcattgatggctttgctgtgctt
ggaaaacttaaaaataatcctgaaatttcagttccgttcgaaatccagtggatggtgatt
cactgcgaccccctgcgaccccagcgcgaaggctgcggcgagctgccggcccggataagc
cagacggtaatcgagagaggtctccctggtccgccaggtcccccgggtccaccagggcca
ccaggagttcccggtattgatggcattgatggggagagaggtccgaacggcccccctggt
ccaccgggtccagatggggatgcaggcaaaccaggatcccctggcctgcctggagagcca
ggagctgatggattcacaggacctgatggctcacgtggagccacaggaccaaaaggacag
aagggtgagccaggactgccaggtgctcgtggacttccgggcaaggggcttcttggacca
cctggtccggctggtgcagcaggacttcctggggaagtaggtcgtgctggtccacctgga
gatccaggaaaaagagggccaccaggaccaccagggccaccaggccctcggggaacaatt
ggcctgcaagatggtgatccattgtgtcccaatgcttgtccacctggccgcccgggacat
gctggcttaatgggaatgaagggacagaaaggttcaaaaggagagtctggtgaaccagga
aaacaaggttataagggtgaagaaggggaccaaggacccagtggtgaagtgggagctcaa
ggccctccaggcatcctaggtatcagaggtataactggtataatgggacctaaaggtacc
aaaggagctcgtggacttgatggtgagcctggtccccaaggtcttcctggtgcacctggg
gatcaaggacagagaggtccactgggagaggcaggtccgaagggagaaaggggccctcaa
ggtacaagaggaataaatggtctccctgggcctaagggagagtctggcttaccaggagtt
gatggccgggaagggatccctggaatgcctggagcaaaaggtgaaccaggaaaacctgga
gctccaggtgatgcagggcttcagggactgccaggtttaccaggctctccaggtgtgaaa
ggcgttcctggcccaaagggtaatagaggtccccctggagtgccaggtttgatgggaaat
tctggtaaaccgggtgaacaggggccagagggagaagcaggtccaacaggaccccgggga
ccaccaggtagcagaggggagccaggtcctgcgggtcctccaggtttaccagggaaatgg
ggtccccagggtgacattggacttcctggactgccaggtcctccaggcctacctggtggt
aagggtgaccggggttcagtgggtgaaccaggacctaagggtgaacaaggtgcacctgga
gcagaaggagatggaggagaaaagggtgacttaggtgatatgggattaccaggagcaaag
ggagctgttggtaatcctggagagcctggttcccgtgggcctgagggaagtcgcggactg
cctggcatggaagggccacgaggctcacctggaccgcgaggcttgcagggtgaacagggt
gccccaggtctgcctggcagccaaggtccagctggaaaagaaccaaccgatcagcacatt
aagcaggtttgcatgagagtcatgcaagaacaactagctcagctggcagccagtcttagg
aggccagaatttggtgctccaggtcttcctggccgaccagggccaccaggtgctccaggg
cctgctggtgaaaatggcttcccaggacagcttggaccccgtggcttgcctggccttaaa
ggtccccctggtgagatcggtcgtaaaggtcctaaaggtgaaccaggagaaagaggagaa
agaggatttccaggcagaggactgaaaggttaccctggaccgagaggtcttccaggtgaa
ccaggcaaacccagctatgggagggaaggccgtgatggtgaacgaggtctccctggggtg
gccggtcagcctggggttcctggtcctcctggccctcccggccctcctgggtactgcgag
ccgtcgtcttgtagaatgcaggctggacagagagttggtaagaacatgaaagggccatga
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