Ciconia boyciana (Oriental stork): 140651386
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Entry
140651386 CDS
T10948
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140651386 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cboy03019
]
140651386 (SKIC3)
Messenger RNA biogenesis [BR:
cboy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
140651386 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_16
TPR_17
TPR_11
TPR_12
TPR_8
TPR_CcmH_CycH
ANAPC3
TPR_9
TPR_15
ARM_TT21_C
TPR-S
Fis1_TPR_C
BTAD
TolB_N
HAT_PRP39_N
TPR_30
TPR_5
TPR_20
Motif
Other DBs
NCBI-GeneID:
140651386
NCBI-ProteinID:
XP_072716894
LinkDB
All DBs
Position
4:complement(101432611..101482119)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGVAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKSNQTDVKGDLADVYQKLLELYESGDKQKWCDVCN
KLVELYHQEKKYLEVAETWQKLIQIKQEEGAEKAELHELWKKMIQLLKDSTQNRDNKTEQ
SLLTAFEHAVNSADTVPGEDHQNLYKDFIQCLSKLPHETARLEKACNDMMALYPTVSYPL
EVLCLHFIQSGTLSEEALHCFSRLLEMDTSSGPGIIGFGIKCLQEKKYKEAVKSLTEGLQ
KTTQCPAAWHYLAEAQMKIHKHRDAVLSCNQALDALGTPEGPNLRWKNLILQLKAEALIK
IADADAAEEAIKSLEQIVDASSDPVVLAIRGQAYLNKGLMDQASKISQELLLSHPDLAES
HALEGFIHYSQKNYEQAERSFLNAIERKAETAEYHQYLGLTYWFMSDETKKDKGKALTQF
LKAAKLDSYLGSVFCYLGNYYRDIAGDKSRARGCYKKAFELDGTDEESGTAAVDLSMELG
DMGTALSILNEVTEKASTGTAKWAWLHRGLYYLRNGQPSQAVADLQAALRADPKDSNCWE
SLGEAYLSRGSYSTALKSFRKASELNPELVYSVYRAAAVEQILGKYENAIATYQQILKKT
EDYVPALKGLGECYLMLARSALDNYLDRKAVDYIEQALEFFTRATRHRPDVSCLWKLLGD
TCTSVHVISPTKVNVQVLGSLLGKNADKQILKKSELLRLGGRCYGRAFKLMPLPSIWCDL
GINYYRQAEHLTAMGTDMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLATGNIEQAHEAFKVAQSLEPSYLLCWIGQA
LIAETVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKSNRNTELYLYNIVQMNAI
PAAQVVLSKYTERNPDDASAFTMLGYLNEYLHLKRQATDAYERAASLLKNSEDTEKYNTA
MQNYGRSLCALGQCDKAIEVYTSTPLTEFDGIVGIALAYFKKGLLQESIKAYEKALSVAE
SEQDKAHILTALAIIEYKQNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHEKGDDRIYERCLIASAVYALQGRNVEVQREVSKAIHSNPDNPALWSLLSRLV
PLYASQKSKGGAVAGNVARVLDVNHGKEVLLNIAVNQLAAGCHVLEDEKNDPLKNIQKAI
HLCPDNPAAWAVLMAACHAENTVVCLNNTQPKRTDLEMTLVSTVSAKTGENNLPHNYIRT
LEDWCLCQAITSLEETGKLSEAEALCTKGLKSCPEHPALFLLLRQVQCKQLLQSHKELPD
TILEELRKTVMTSSASVAAWQWLAKVYQSQRMMVGAEMCYRKSLQLASQQGSWNGKLSSL
LRLAMLALEICMANVSNEHWPSLVQEATTEALKLSSCPLAALLQALLQYNRKMGARETRR
MLERVVYQPGNPETIVSVARWYLLQHLYAKNDYELIDVLVENAKANGDVRALELNEILSA
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattaaagagtgctagagacgccatacgaaataaa
gaatataaggaagccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcttgggtatttattggcgtggcagctgctgagttagagcagcctgatcaggccaaa
ggagcatataagaaggccattgaacttgaaccaaaccagttactagcatggcagggatta
gcaaatttatatgagaaatccaaccaaacagatgtcaaaggagacttagcagatgtttac
caaaagctcttggaactctatgaaagtggtgacaagcagaaatggtgcgatgtatgtaac
aagcttgtggaactatatcatcaagaaaagaaatatttagaggtggctgaaacatggcag
aaactaatacaaataaaacaggaggaaggtgcagaaaaggcagagctgcacgagctttgg
aagaagatgatccagttactgaaggacagtacacaaaaccgggataataagactgagcag
tcgcttttgactgcatttgaacatgcggtgaactctgctgacactgttcctggtgaagac
caccaaaatctttacaaggactttattcagtgcttgtcaaaacttcctcatgaaacagct
aggttggaaaaggcctgtaatgatatgatggctttgtatcctactgtgagttatccttta
gaagtactttgcttgcactttattcagtcaggaactttgtcagaagaggccctgcactgt
ttttctaggcttttggagatggacacaagcagcggtccaggcatcattggttttggtata
aaatgcctccaagaaaagaaatacaaggaggctgttaagagtcttactgaaggtttgcag
aaaactacccagtgtccagcagcatggcattatttggcagaggcacagatgaaaattcac
aaacacagggatgctgtcctgtcctgcaatcaagcgcttgacgctcttggaactcctgaa
ggtcctaatcttcggtggaagaaccttatccttcagttgaaagcagaggctttgattaaa
atagctgatgctgatgctgcagaagaagccattaaatcacttgagcagattgtggatgca
agcagtgatccagtggttttagctatcagaggtcaggcttatctaaacaaaggcttaatg
gatcaagcttccaagatttcacaagagcttctgttgtcccaccctgatctggctgagtcc
catgctctagagggtttcatccattattcccaaaagaactatgaacaggcggaaagaagt
tttctaaatgctattgaaagaaaggctgaaactgcagagtatcatcagtacctggggctt
acttactggttcatgagcgatgagacaaaaaaagacaaaggaaaagcactcacccagttc
ttgaaggctgcaaaattggacagctacttgggaagtgtcttttgttatttaggtaactac
tatagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatggaaccgatgaagaatctggaacagcagctgtagacttaagcatggaacttgga
gacatgggcactgctctgtcaatcctgaatgaggtaactgaaaaagcgagtactggtaca
gcaaaatgggcctggcttcatcgtggactttactacctgagaaatggtcagccgtcacaa
gcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgggag
tctctaggggaggcttacttgagcagaggtagctattcaacagctctaaaatccttcagg
aaagcaagtgagctgaacccagagcttgtgtacagtgtttacagagctgcagcagttgag
cagattctaggcaaatatgaaaatgctatagctacctatcaacaaatcttaaagaagaca
gaagactatgtgcctgcactgaaaggacttggtgagtgctatctcatgctggcaagatca
gcccttgataactatcttgataggaaggctgtggattacatagagcaggctcttgaattt
tttacaagggcaacaaggcaccgtcctgatgtatcttgcctctggaaactgcttggagat
acctgtactagtgtgcatgttatttcaccaaccaaagtgaatgttcaagttctaggatcc
cttctgggtaaaaatgcagacaaacagatcctgaagaaaagtgagctgctcagactggga
ggaaggtgttacggcagagcttttaaattgatgcctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagcacctcacagcaatgggcactgacatgaatgag
atcagtgaactgctagagaagtctttacagtgtctcaaaaaagctgtgaggcttgacagc
aaaaatcatctttattggaatgcacttggtgtagttgcttcctgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaatcaatgttgtt
gcctggaccaacttgggggttttgtatctggcaactggaaacattgagcaagctcatgaa
gccttcaaggtagcccagtctctggagccttcttacttactgtgttggattgggcaggct
cttattgcagagacagtaggcagctatgatactatggatctcttcaggcacaccactgaa
ctcagtatgcatactgagggagcaaaaggctatgcccactgggtatgttcaacgctgcag
gataaaagcaacagaaacactgaactatatctgtacaacattgttcaaatgaatgctatt
ccagcagcccaggtggtcttgagcaaatatacagaaagaaatccagatgatgcgtctgct
ttcacaatgcttggttatttgaatgagtatctgcatctaaaaaggcaggcaacagatgcc
tatgagagggcagcttcattgctgaaaaactctgaggatactgagaaatataatacagca
atgcaaaactatggcaggtcactgtgtgcccttggtcagtgtgataaggccattgaggtt
tacacatcaacacccctgactgagtttgatggcattgtggggatagcgttagcctacttc
aagaaaggactcttacaagaaagtatcaaagcttatgaaaaagccttgtctgttgctgag
tctgaacaagataaagcacatatcctgactgccttggcaataatagagtataaacagaac
aaagtggatgctgcaaagacactgctatttaaatgctcattaaaggaacctagtacagaa
agtctgaaggccttgtgcacactaggactggtaaagcaggatgctacacttgcaacagca
gccctaaaagaattactgaagcatgaaaaaggggacgataggatttatgagaggtgcctt
attgcatctgctgtttatgcattgcaaggtagaaatgtggaggtccagagagaagtctcc
aaagcaatacacagtaaccctgataatcctgccctctggtctcttctgtctcgactagtt
ccactgtatgcatcacaaaagtcaaaagggggagctgtagcaggaaacgtcgcacgtgta
cttgatgtaaaccatggaaaggaagtcctgctcaatattgcagttaatcagttggcagca
ggatgtcatgtgttagaagatgagaaaaatgatcctctgaaaaatattcagaaggctatc
cacctctgtccagataatcctgctgcctgggcagtgctaatggcagcctgtcatgctgaa
aacaccgtggtctgtctaaacaacactcagccgaagcgaacagatctagagatgacactt
gtatctacagtttcagccaaaactggagaaaataaccttccgcataattatatccggact
cttgaagactggtgtctatgtcaagctattaccagtctagaggagactggtaaactctca
gaagctgaagctctttgtaccaagggtttaaaaagctgtcctgagcacccagctctgttt
ttgcttctgagacaagttcagtgtaagcagctattgcagtctcacaaagaacttcctgac
accatcctggaggagcttcgcaagacagtcatgaccagttcagcttcggttgcagcctgg
caatggctggcaaaagtgtatcagtctcaaagaatgatggttggagcagagatgtgttac
agaaagagtctgcagttggcgtcacagcagggcagctggaacgggaagttatccagtctg
ctcaggctagctatgctcgcactggaaatctgtatggctaatgtctcaaatgagcactgg
ccatccttggttcaggaggcaacaactgaagctttgaaactttcttcttgccccctggca
gctctcctgcaagcactgctacagtataatcgcaaaatgggagcaagggagactcgtcga
atgttggaaagagtggtatatcaaccggggaatccagaaaccatagtgtcagtagcacgc
tggtacctcctgcaacatctgtatgccaaaaatgattacgaattaatagatgtgcttgta
gaaaatgccaaagctaatggagatgttagagctctggaactaaatgagatattgtcagca
agtgcctag
DBGET
integrated database retrieval system
