Ciconia boyciana (Oriental stork): 140661423
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Entry
140661423 CDS
T10948
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04510
Focal adhesion
cboy04512
ECM-receptor interaction
cboy04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140661423 (TNC)
04518 Integrin signaling
140661423 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140661423 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cboy00536
]
140661423 (TNC)
Glycosaminoglycan binding proteins [BR:
cboy00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
140661423 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
DUF7949
Pur_ac_phosph_N
EGF
Interfer-bind
NDNF
hEGF
DUF4998
Fn3_R-PTP-O
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
140661423
NCBI-ProteinID:
XP_072739623
LinkDB
All DBs
Position
18:9947058..10052745
Genome browser
AA seq
1807 aa
AA seq
DB search
MGLPTQVLACVILALLYQHVNGGLIKRIIRHKRETGLNVTLPEDNQPVVFNHVYNIKLPV
GSLCSVDLDTASGDADLKAEIEPVKNYEEHTVNDENQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCASGAGCCPNSQAVEGRLDTTPYCSGHGNYSIEICGCICEP
GWKGPNCSEPDCPRNCFNQGLCVQGKCICNEGFTGEDCSQATCPSDCNDQGKCVDGVCMC
FEGYTGTDCSEELCSQGCTVHGRCVSGQCVCHEGFTGEDCSEPLCPSNCHNRGRCVDSEC
VCDEGYTGEDCSELICPNDCFDRGRCVNGTCFCEEGFTGEDCGELTCPNNCNGNGHCENG
LCICYEGFVGDDCSEKRCPKDCHNRGRCVGGRCICHEGYLGEDCGELRCPNDCHNRGRCV
NGQCVCHEGFIGEDCRELRCPNDCNNRGRCVNGQCVCHEGFMGDDCGELRCPNDCNNHGL
CVNGQCVCHEGYTGEDCGELRCPNDCNNRGRCVEGRCECDNGFTGEDCGELSCPNDCHQR
GRCIDGHCVCHEGFMGEDCRERSCPNDCNNAGRCIDGRCVCEDGYMGDDCSDVSPPTELT
VTNITDKTVNLEWKHENLVNEYLITYVPTSSGGLDMQFTVPGNQTAATIHELEPGVEYFI
RVFAILKNKKSIPVSARVATYLPAPEGLKFKSVRETSVQVEWDPLNFSFDGWELVFRNMK
KDDNGDITSSLKRPETSYMQPGLAPGQQYNVSLHIVKNNTRGPGLSRVITTKLDAPSQIE
AKDVTDTTALITWSKPLAEIEGIELTYGPKDVPGDRTTIDLSEDETQYSIGNLRPHTEYE
VTLISRRGDMESDPMKEIFVTDLDAPRNLKRVSQTDNSITLEWKNSHANIDNYRIKFAPI
SGGDHAEITVPKGSQATTRATLTGLRPGTEYGIGVTAVRQDRESAPATINAGTDLDNPKD
LEVSDPTETTLSLRWRRPVAKFDRYRLIYVNPSGRKNEVEIPVDSTSFILRGLEAGTEYT
ISLVAEKGRHKSKPTTVKSSTEEEPELGKLSVSETGWDGFQLTWTAADGAYENFIIQVQE
SDNPEETRNITVPGGLRFMNVTGLKANTPYNITLHGVIQGYRTKPLSVETVTGLHPEVGE
LTVSDITPESFNLSWTTTNGDFDVFTIEIIDSNRLLEPMEFNISGNSRTAHISGLSPSTD
FIVYLYGISHGFRTQAISAAATTEAEPEVDNLLVSDATPDGFRLSWTADDGVFDSFVLKI
RDTKRKSDPLELIVPGHERTQDITGLKEGTEYEIELYGFSSGRRSQPVNAVATTVVGSPK
GISFSDITENSATVSWTPPRTRVESYRISYVPVTGGTPNVVTVDGSKTRTKLVKLVPGVD
YNVSIISVKGFEESEPISGTLKTALDSPSGLVVVNITDSEALATWQPAIAAVDNYVVSYA
SEDEPEVTQMVSGNTVEYDLKGLRPATEYTLSVHALKDMQKSETLSTQFTTGLDAPRDLG
ATEVQSETAVITWRPPRAPVTGYLLIYESIDGRVKEVILNPETTSYSLTELSPSTQYTVK
LQALNRSLKSKTIQTIFTTTGLLYPYPKDCSQALLNGETTSGLYTVYLNGDKAQPLQVFC
DMGKDGGGWIVFLRRQNGKEDFYRNWKTYVAGFGDPKDEFWIGLENLHKITSQGQYELRV
DLQDKGETAYAVYDRFSVGDMKSRYRLRVDGYSGTAGDSMTYHNGRSFSTFDKDNDSAIT
NCALSYKGAFWYKNCHRVNLMGRYGDNSHSQGVNWFHWKGHEYSIQFAEMKVRPSSFRNL
EGRRKRA
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgggactccccacccaggttttggcctgtgtgatcttagctttgctgtaccagcatgtc
aatggtggactcatcaagcgaattatccggcataagcgggagactgggctaaacgtgacc
ttgccagaggataatcagcctgtggtttttaaccacgtctacaacattaagttgcctgtt
ggctccctttgctctgtggacctggatacagcaagtggtgatgcagacctgaaggcagaa
attgagcctgtcaagaattatgaggagcacacggtgaatgatgagaaccagatcgtcttc
acgcaccgtattaacatccctcgccgggcttgtggctgtgcagctgccccagacattaag
gatctgttgagcagactagaggagctggaggggctggtatcctccctacgggagcagtgt
gccagtggggctggatgctgtcctaattcccaggcagtagaaggtcgcctggacacaaca
ccctattgcagtggacatggcaattacagcatcgagatctgcggctgcatctgcgagcct
ggctggaaaggccccaactgctctgaaccggactgcccacgcaactgcttcaaccagggc
ctttgcgtccagggcaaatgtatctgcaatgaaggcttcactggcgaggactgcagccag
gccacctgcccatctgactgtaacgaccaaggcaagtgcgtggatggggtttgcatgtgc
tttgagggatacacaggcacagactgcagtgaagagctctgctcccaagggtgcactgtg
catgggaggtgcgtgagcgggcagtgtgtgtgccatgagggcttcaccggtgaagactgc
agtgaacctctctgccccagcaactgccacaaccgtgggcgctgtgtggacagcgagtgt
gtctgcgatgagggctacactggcgaggactgcagtgagctcatctgccccaatgactgc
tttgaccgtgggcgctgcgtcaatgggacctgcttctgcgaggagggcttcaccggggaa
gactgtggggagctgacctgccctaacaactgcaatggcaatgggcactgcgagaatggg
ctgtgcatctgctacgagggcttcgtgggggatgactgcagtgagaagaggtgcccaaag
gactgccacaaccgcgggcgttgcgtgggcgggcgctgcatctgccatgaggggtacctg
ggcgaggactgtggggagctgcggtgccccaacgactgtcacaaccgcgggcgctgtgtc
aacgggcagtgtgtgtgccacgaaggattcattggagaggactgcagggagctgcggtgc
cccaatgactgcaacaaccgcgggcgctgtgtcaacgggcagtgtgtgtgccatgaggga
ttcatgggggatgactgtggtgagctgcggtgccccaatgattgcaacaaccatggactc
tgtgtcaatgggcagtgtgtgtgtcacgaggggtacacaggggaggactgtggtgagctg
cggtgccccaacgattgcaacaaccgtgggcgctgtgtggaggggcgctgtgagtgtgat
aatggcttcacaggggaggactgcggcgagctgtcctgccccaacgactgccaccagcgc
gggcgctgcattgatgggcactgtgtgtgccatgagggcttcatgggggaggactgccgt
gaacgatcctgccccaacgactgcaacaatgcgggccgctgcatcgatggacgatgtgtc
tgtgaggatggttacatgggagatgactgctctgacgtgtctcctccaactgagctgact
gtgacaaacataacagataaaaccgtaaatctggaatggaagcatgagaatctcgtcaat
gagtacctcatcacctatgtccctaccagcagtggtggcttagatatgcagttcaccgtg
ccaggaaaccagacagctgccactattcatgaactggagccgggtgtagaatactttatc
cgtgtctttgcaatccttaaaaacaagaagagtattccagtcagtgccagggtagcaaca
tatctgcctgctccagaaggtctgaaattcaaatctgttagagaaacgtccgtccaggtg
gagtgggatcctctgaacttttcatttgatggctgggagctggtcttccgtaatatgaaa
aaggatgataatggagatataaccagcagcctgaaaaggccagagacatcttatatgcag
ccaggtttggcaccagggcaacagtataatgtatcccttcatatagtgaaaaacaatacc
agaggaccaggactatccagagtgataaccacaaagcttgatgcccctagccagatcgag
gcaaaagatgttacagacaccacagctcttatcacatggtccaaacccttggctgaaatt
gaaggcatagagctcacttatggccccaaggatgttccaggggacaggacaaccattgac
ctctctgaagatgaaacccaatattctattggaaacctgaggccgcacacagagtatgaa
gtgacactcatctctcgtcgaggggacatggaaagtgaccctatgaaagaaatctttgtc
acagacttggatgctccaagaaacctgaagcgggtgtcacagacagacaatagcattact
ttggagtggaagaacagccatgcaaatattgataactatcgaattaagtttgctcccatc
tctggtggagaccatgctgagatcacagtgccaaagggcagccaagcaacaaccagagct
acactcacaggtttgaggcctggaactgaatatggcattggagtgacagcagtgagacag
gacagggaaagcgctcctgctaccattaatgctggcactgatcttgataaccccaaggac
ttggaagtcagtgaccctactgaaaccaccttatcccttcgctggagaagaccagtggcc
aagtttgatcgttatcgcctcatttacgttaacccttctggaaggaagaacgaagtggag
atccctgtggacagcacctcttttatcctgcgagggttggaggcagggacagaatacacc
attagtctggtggcagagaaaggcagacacaaaagcaaacccacaactgtcaagagttcg
actgaggaggaacctgagcttggaaaattatcagtatcagagactggctgggatggtttc
cagctcacctggacagcagccgacggggcctatgagaactttatcattcaggtgcaggag
tctgacaatcccgaagaaacccggaatatcacagtcccaggtggactgcgctttatgaat
gttacaggcctcaaggccaacacaccttataacatcacacttcatggtgtgattcaaggc
tacaggaccaaacccctttctgttgaaaccgtgacaggattgcacccagaagttggtgag
ctaaccgtttccgacattactcctgaaagcttcaacctgtcttggacaaccaccaatggg
gacttcgacgtctttactattgaaattattgattctaacaggttgctggagcccatggag
ttcaacatctcaggcaattcaagaactgctcatatctcagggctttcccccagcactgat
tttattgtctacctctatgggatctctcatggtttccgcacacaggcaataagtgctgca
gctacaacagaagcagaacccgaggtcgacaaccttctggtttcagatgctactccagat
ggcttccgtctgtcctggactgcagatgatggggttttcgacagttttgttctaaaaatc
agggataccaaaaggaaatctgatccactggaactaatagtaccaggccatgaacgcacc
caggatataacagggctgaaagagggtactgaatatgaaattgagctctatggatttagc
agtggacggcgttcccaacctgtaaatgcagtagcaaccacagttgttggatctcccaag
ggaatttctttctctgacatcacggaaaactctgctacagtcagctggacaccccctcgc
acccgcgtggagagctaccggatctcctatgtccctgtcacaggaggtactccaaatgtt
gttacagtcgatggaagcaagacaaggaccaagttggtgaagttagtcccaggtgtagac
tacaatgttagtatcatctctgtgaaaggctttgaagaaagtgaacccatctctggcact
ctgaaaacagctctggacagcccgtcaggcctagtagtggtgaacatcacagactctgag
gctctggcaacctggcagccagcaattgctgctgtggataattacgttgtctcctatgct
tctgaggatgaaccagaagttactcagatggtatcaggaaacactgtggagtatgacctg
aagggccttcgacctgcaactgagtatacgctgagtgtccatgcactgaaggacatgcag
aagagtgagaccctctccacccagtttactacaggactggatgctccaagagatttaggt
gccactgaggttcagtcagaaacagctgtgataacttggaggcctccacgtgctcctgtc
actggttatctcctgatctacgagtccattgatggcagagtcaaggaagtcatcctaaac
cccgagacaacttcctacagcctgacagagctgagcccatctacccagtacacggtgaaa
ctccaggcgctgaacagatccctgaagagcaaaacgatccagactattttcaccacaact
ggtcttctctatccttacccgaaagactgctcccaggctctcctgaatggagaaaccacc
tctgggctctacacagtttacctgaatggggacaaggctcagcctctgcaagttttctgc
gacatgggcaaggacgggggtggatggattgtgttcctgaggcgtcaaaatggaaaggaa
gatttctacaggaactggaagacttatgtggctggttttggagatcctaaggatgaattc
tggataggtctggagaaccttcacaaaatcacttctcagggccagtatgagctgcgcgtg
gatctgcaggacaaaggtgagacagcttatgctgtctacgacaggttcagcgttggagac
atgaagagcagataccggctaagagtggatgggtacagtggcacagcaggtgactccatg
acgtaccataatggaaggtccttctccacctttgacaaggacaatgattctgccatcacc
aactgtgctttgtcatacaagggtgcattctggtacaagaactgtcaccgagtcaatctg
atgggcagatatggtgacaacagccacagtcagggtgttaactggttccactggaagggc
cacgagtattccatccagtttgcagagatgaaagtgagaccctccagcttccgcaatctg
gaaggaaggcgaaagcgagcgtaa
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integrated database retrieval system
