KEGG   Lawsonella clevelandensis: AL705_08060
Entry
AL705_08060       CDS       T04080                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
cbq  Lawsonella clevelandensis
Pathway
cbq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cbq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AL705_08060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbq03400]
    AL705_08060
DNA repair and recombination proteins [BR:cbq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AL705_08060
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AL705_08060
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_22 AAA_16 TrwB_AAD_bind AAA_30 UB2H AAA_5 Helicase_RecD DUF87 UvrD-helicase AIG1 HEM4
Other DBs
NCBI-ProteinID: ALE19480
UniProt: A0A0M3TBU1
LinkDB
Position
1861583..1863781
AA seq 732 aa
MAFATEHPDLPESGYRPVGEILRTSQPFHVKSPFQPAGDQPTAIAELAYRINRGDRDTVL
MGATGTGKSATAAWLIEQVQRPTLVMAPNKTLAAQLANELRTLLPNNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINEDVERLRHSATMSLLSRRDVVVVASVSCIYGLGTPQSYLDR
SILLRVGDELDRDEFIKLLVEIQYDRNDIAFSRGVFRVKGDTIDIIPAYEELAVRIEFFG
DEIDGLYYLNPLTGDIVRPVDDLHIFPATHYVAGPERMKEAIEGIQQELDSRLQQLESTG
KLLEAQRLRMRTTYDIEMMEQMGFCSGIENYSRHIDGRGPGTPPATLLDYFPDDFLTIID
ESHVTVPQIGGMFEGDMSRKRNLVEYGFRLPSALDNRPLTFDEFEARVGQTVYMSATPGP
FELEASHGEVVEQVIRPTGLVDPKVVVKPTKGQIDDLLGEIRERTARDERILVTTLTKKM
AEDLTDYLLERGIRVRYLHSDIDTLRRVELLRQLRLGSYDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSRTSLIQTIGRAARNVSGEVHMYADSITDSMRDAIDETERRRAKQIAY
NEEHGIDPQPLRKQITDILDELYDDLDDSTETSAHEMKKGSRLAARTQQHAQRGKLDSAG
KRGTGGDSAVPGLENLDTAHMPRKRMEALIAELTDQMATAARDLQFEIAARLRDEIADLK
REVHHMEEAGIE
NT seq 2199 nt   +upstreamnt  +downstreamnt
gtggccttcgcgaccgaacaccctgacctccccgaatccggttaccggccggtcggcgag
atcctccgtacctcccagcccttccacgtcaaaagccccttccaacccgccggcgaccaa
ccgaccgcaatcgcagagctcgcctaccgaatcaaccgtggagacagggacactgtgctg
atgggcgccacgggtaccggaaaatcggccaccgcggcctggctcatcgaacaggttcag
cgccccaccttggtcatggccccaaataagacgctggcagcacagctcgccaacgaacta
cgcaccctcctgccgaataacgcagttgagtacttcgtctcctactacgactactaccaa
cccgaagcgtatatcgcgcaaactgacacgtatatcgaaaaagactcctccatcaacgaa
gatgtggaacggctccgtcactcggccaccatgagtttgctatctcgtcgagacgtcgtc
gttgtcgcatccgtctcctgcatttacggcttaggcactccccagtcctaccttgaccgg
tctattctgctgcgtgtcggcgacgaactcgaccgtgatgaattcatcaaactactcgtg
gagatccagtacgaccgtaacgacatcgcttttagccgtggcgttttccgagtcaaaggc
gacactatcgacatcatccctgcctatgaagagctcgccgtacgcattgagtttttcgga
gacgagattgacggcctctactatctcaacccactcaccggtgacatcgtccgcccggtg
gacgacctccacattttcccggccacccactacgtggccggtccggaacggatgaaagaa
gccatcgagggaattcagcaagaactcgatagtcgcctgcaacagttggagtccaccggc
aaactgctggaagcacaacgcctccgcatgcgcaccacctacgacatcgaaatgatggag
cagatgggcttctgctctggtatcgaaaactactctcggcatatcgacggacgtggccct
ggaaccccgcctgccacattgctcgactatttcccggacgacttcctcaccatcattgac
gagtcacacgttaccgttccccaaatcggtggcatgttcgaaggcgacatgagccgcaaa
cgcaacctggtcgagtacgggttccggctgccctctgcactcgacaaccgaccgctcacc
ttcgacgaattcgaagcacgcgttggacagaccgtctacatgtccgcgacccccggcccc
ttcgaacttgaggcatcccatggggaggtagtcgaacaggttattcgccccaccggactc
gtcgaccccaaagtagtcgtgaaacccaccaagggacagatcgatgacctcctcggagaa
atccgggaacgaaccgcccgagacgagcgtattctcgtcaccacactgacgaaaaagatg
gcggaagacctcaccgactatctcctggagcggggaatacgtgtacgctatctccattct
gacatcgatacactgcggcgcgtcgaactgctccgccagttacgacttggttcctatgac
gtactggtcggtattaacttgctcagggaaggtctcgaccttccggaagtttctctcgtg
gcgattctcgacgccgataaggaaggattcctccgatcccgcacctccctgatccagaca
attggtcgtgccgcccgaaacgtcagtggtgaagtgcacatgtatgcggactccatcacc
gactcgatgcgggacgctattgacgagacagagcggcgtcgggccaaacagattgcgtat
aacgaggagcacgggatcgatccgcagccgcttcgcaaacagattacggatatcctcgat
gagctctatgacgacctcgatgactccactgaaacttctgctcatgagatgaaaaagggc
tctcggttagcggctcgcacccaacaacatgcgcagcgcggcaaactcgattccgcgggg
aagcgcggtactggtggggatagtgcggtgccgggactggaaaacctggacactgcacat
atgccgcgaaagcgcatggaagctcttatcgctgaactcacagaccagatggcgacagca
gcgcgtgatctccagtttgagatcgctgcccgcctccgggacgagattgcggatctcaaa
cgggaagtgcaccacatggaagaagccggaatcgagtaa

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