Lawsonella clevelandensis: AL705_08060
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Entry
AL705_08060 CDS
T04080
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cbq
Lawsonella clevelandensis
Pathway
cbq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AL705_08060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbq03400
]
AL705_08060
DNA repair and recombination proteins [BR:
cbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL705_08060
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AL705_08060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_16
TrwB_AAD_bind
AAA_30
UB2H
AAA_5
Helicase_RecD
DUF87
UvrD-helicase
AIG1
HEM4
Motif
Other DBs
NCBI-ProteinID:
ALE19480
UniProt:
A0A0M3TBU1
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All DBs
Position
1861583..1863781
Genome browser
AA seq
732 aa
AA seq
DB search
MAFATEHPDLPESGYRPVGEILRTSQPFHVKSPFQPAGDQPTAIAELAYRINRGDRDTVL
MGATGTGKSATAAWLIEQVQRPTLVMAPNKTLAAQLANELRTLLPNNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINEDVERLRHSATMSLLSRRDVVVVASVSCIYGLGTPQSYLDR
SILLRVGDELDRDEFIKLLVEIQYDRNDIAFSRGVFRVKGDTIDIIPAYEELAVRIEFFG
DEIDGLYYLNPLTGDIVRPVDDLHIFPATHYVAGPERMKEAIEGIQQELDSRLQQLESTG
KLLEAQRLRMRTTYDIEMMEQMGFCSGIENYSRHIDGRGPGTPPATLLDYFPDDFLTIID
ESHVTVPQIGGMFEGDMSRKRNLVEYGFRLPSALDNRPLTFDEFEARVGQTVYMSATPGP
FELEASHGEVVEQVIRPTGLVDPKVVVKPTKGQIDDLLGEIRERTARDERILVTTLTKKM
AEDLTDYLLERGIRVRYLHSDIDTLRRVELLRQLRLGSYDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSRTSLIQTIGRAARNVSGEVHMYADSITDSMRDAIDETERRRAKQIAY
NEEHGIDPQPLRKQITDILDELYDDLDDSTETSAHEMKKGSRLAARTQQHAQRGKLDSAG
KRGTGGDSAVPGLENLDTAHMPRKRMEALIAELTDQMATAARDLQFEIAARLRDEIADLK
REVHHMEEAGIE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtggccttcgcgaccgaacaccctgacctccccgaatccggttaccggccggtcggcgag
atcctccgtacctcccagcccttccacgtcaaaagccccttccaacccgccggcgaccaa
ccgaccgcaatcgcagagctcgcctaccgaatcaaccgtggagacagggacactgtgctg
atgggcgccacgggtaccggaaaatcggccaccgcggcctggctcatcgaacaggttcag
cgccccaccttggtcatggccccaaataagacgctggcagcacagctcgccaacgaacta
cgcaccctcctgccgaataacgcagttgagtacttcgtctcctactacgactactaccaa
cccgaagcgtatatcgcgcaaactgacacgtatatcgaaaaagactcctccatcaacgaa
gatgtggaacggctccgtcactcggccaccatgagtttgctatctcgtcgagacgtcgtc
gttgtcgcatccgtctcctgcatttacggcttaggcactccccagtcctaccttgaccgg
tctattctgctgcgtgtcggcgacgaactcgaccgtgatgaattcatcaaactactcgtg
gagatccagtacgaccgtaacgacatcgcttttagccgtggcgttttccgagtcaaaggc
gacactatcgacatcatccctgcctatgaagagctcgccgtacgcattgagtttttcgga
gacgagattgacggcctctactatctcaacccactcaccggtgacatcgtccgcccggtg
gacgacctccacattttcccggccacccactacgtggccggtccggaacggatgaaagaa
gccatcgagggaattcagcaagaactcgatagtcgcctgcaacagttggagtccaccggc
aaactgctggaagcacaacgcctccgcatgcgcaccacctacgacatcgaaatgatggag
cagatgggcttctgctctggtatcgaaaactactctcggcatatcgacggacgtggccct
ggaaccccgcctgccacattgctcgactatttcccggacgacttcctcaccatcattgac
gagtcacacgttaccgttccccaaatcggtggcatgttcgaaggcgacatgagccgcaaa
cgcaacctggtcgagtacgggttccggctgccctctgcactcgacaaccgaccgctcacc
ttcgacgaattcgaagcacgcgttggacagaccgtctacatgtccgcgacccccggcccc
ttcgaacttgaggcatcccatggggaggtagtcgaacaggttattcgccccaccggactc
gtcgaccccaaagtagtcgtgaaacccaccaagggacagatcgatgacctcctcggagaa
atccgggaacgaaccgcccgagacgagcgtattctcgtcaccacactgacgaaaaagatg
gcggaagacctcaccgactatctcctggagcggggaatacgtgtacgctatctccattct
gacatcgatacactgcggcgcgtcgaactgctccgccagttacgacttggttcctatgac
gtactggtcggtattaacttgctcagggaaggtctcgaccttccggaagtttctctcgtg
gcgattctcgacgccgataaggaaggattcctccgatcccgcacctccctgatccagaca
attggtcgtgccgcccgaaacgtcagtggtgaagtgcacatgtatgcggactccatcacc
gactcgatgcgggacgctattgacgagacagagcggcgtcgggccaaacagattgcgtat
aacgaggagcacgggatcgatccgcagccgcttcgcaaacagattacggatatcctcgat
gagctctatgacgacctcgatgactccactgaaacttctgctcatgagatgaaaaagggc
tctcggttagcggctcgcacccaacaacatgcgcagcgcggcaaactcgattccgcgggg
aagcgcggtactggtggggatagtgcggtgccgggactggaaaacctggacactgcacat
atgccgcgaaagcgcatggaagctcttatcgctgaactcacagaccagatggcgacagca
gcgcgtgatctccagtttgagatcgctgcccgcctccgggacgagattgcggatctcaaa
cgggaagtgcaccacatggaagaagccggaatcgagtaa
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