KEGG   Caenorhabditis briggsae (nematode): CBG_02013
Entry
CBG_02013         CDS       T01054                                 
Symbol
Cbr-osm-5
Name
(RefSeq) Protein CBR-OSM-5
  KO
K16474  intraflagellar transport protein 88
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cbr03037]
    CBG_02013 (Cbr-osm-5)
Cilium and associated proteins [BR:cbr03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   CBG_02013 (Cbr-osm-5)
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_16 TPR_14 TPR_12 TPR_8 TPR_6 TPR_7 TPR_19 TPR_11 TPR_17 TPR_10 TPR_15 ANAPC3 ARM_TT21_5th TPR_CcmH_CycH TPR-S ARM_TT21_2nd TPR_MalT ARM_TT21_4th HAT_PRP39_C DUF2989 TPR_EMC2 Endopep_inhib NatA_aux_su
Other DBs
NCBI-GeneID: 8585794
NCBI-ProteinID: XP_045092005
WormBase: CBG02013
LinkDB
Position
X:complement(3816221..3819745)
AA seq 863 aa
MHQNSFRENDDDDFYGGFDSYNQAYDIEVFFEIETFFQSITQNPQFQQAVARSSHGRRPN
TSQMGFRDPGSSYGKPPPTMISKILYTYYFATNMSRMGGRTAMANNNEPARPMTAVRGAG
YTSFANKDDFFLQFKLRKELLALRTWGRVVMFSEEEKCKQMENKVMDMLRESMIASEKKK
YKEALDKGKEAGRRERAVVKHREQSGLVESMNLDLTFTVLFNLAQQYEANDMTNEALNTY
EIIVRNKMFPNSGRLRVNIGNIHYKRREFTKALKYYRMALDQVPSIQKDTRIKILNNIGV
TFVRMGSYDDAVNTFEHVVEEQPNFASALNLILTSFCIQDAEKMRESFLKLIDIPGFPDD
EFMKEKEDDDVLLNQTLNSDALRHWEKQQKNEAEKAIITAVKIISPLIAPDYAIGYEWCL
ESLKQSTHAVLAIDLEMTKAGEMMKNGDIESAVEVLKIFNAQDSKTAAAAANNLCMLRFL
VNTFLNSIFISKVQQGGRRLVDAQQYADQALSIDRFSAHALVNQGNIHYMNGDLDKAMAH
YREALTNDASCVQALFNIGLASKAQGNLELALEYFFKLHGILVNNVQVLVQLASIYESLE
DSAQAIELYSQANSMVPNDPAILSKLADLYDQEGDKSQAFQCHYDSYRYFPSNLDTVEWL
ASYYLETQFSEKSISYFEKAALMQPNVSKWQMLIATCLRRTGNYQRAFDLYRQIHRKFPH
DLECLKFLVRIAGDLGMTEYKEYKDKLEKAEKINQLRLQRESDSSQGKRHSANSTHSLPP
SGLTGLGSGSGGSSGGARQYSAHIPLLDNTASFSVSQRDMRENDFSYDDPIGMTNRPKTG
SRKTVTELSPDDFAEFDESLLPD
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgcaccaaaactcgtttcgtgaaaacgacgacgatgatttctacggtggatttgattcc
tacaatcaagcgtatgatatcgaggtattttttgaaattgaaactttttttcaaagtatc
acacaaaaccctcaattccaacaagctgttgctcgatcgagtcatggaaggcgcccgaac
acatcacaaatgggattccgagatccaggctcttcttacggcaaacctccacccacaatg
atcagtaagattttatacacctactatttcgcaaccaacatgagccgcatgggcggccga
acggcgatggccaacaacaacgagccggctcgaccgatgaccgctgtccgtggagccgga
tacacatcgtttgcaaacaaagacgatttttttttgcagttcaagctgcggaaagaacta
ttagcactgagaacttgggggagagtggtgatgttcagtgaagaggaaaaatgtaagcag
atggagaataaggtgatggatatgttgcgtgagagtatgattgccagtgagaagaagaag
tataaagaggcgctagacaagggaaaagaggcaggaagacgggagagagcagttgtgaag
caccgtgagcaatctggactagtggagagcatgaatttggatttaacgtttacggttctc
ttcaatttggctcaacaatatgaggctaatgacatgaccaacgaggcactgaacacctat
gaaatcattgtgagaaacaaaatgttcccgaactctggaagattaagagtcaacattgga
aacatccattataaacgtcgagagtttaccaaagcgttgaagtactatcggatggctttg
gatcaagtgccgagcattcagaaggatacaagaataaaaattctgaataatatcggagtc
acttttgtgagaatgggatcctatgatgatgcggtgaacacttttgagcatgttgtcgag
gagcaaccaaattttgcgagtgcattgaacttaattttgacttcgttctgcatacaagac
gccgaaaaaatgagggaatcatttttaaaactcatcgacattcctggcttccctgatgat
gagttcatgaaagagaaagaagacgatgatgtgctcttgaatcaaactctcaactcggat
gcattaagacactgggaaaaacaacaaaagaacgaagcggagaaagcaatcatcacagct
gtgaaaataattagcccgctaattgcgccggactacgctatcggctatgaatggtgtttg
gagtctctgaaacagtcgactcatgctgtcttagcaattgatctagaaatgacaaaagcc
ggagagatgatgaaaaatggagacattgaaagtgcagtggaggttctcaagattttcaat
gcccaagactcaaaaacagcagcagctgcagcaaataatctttgcatgttaagattcttg
gtgaacacttttttaaattcaatttttatatccaaagttcagcaaggaggtcgtcgtctt
gtggatgctcaacagtatgctgaccaagctttatcaattgatcgttttagtgcacatgcg
cttgtgaaccagggaaatatccattatatgaatggagacttggataaagctatggctcac
tatcgtgaggctctgaccaatgatgctagctgtgttcaggcattgttcaatattggtttg
gcctcaaaagctcaaggaaatctggaactggcattggaatatttcttcaagctacacgga
attctggtgaacaatgttcaagtgttagttcaattggcatcaatatacgaatctctagaa
gattccgctcaagccatcgaattgtacagccaagctaatagcatggtcccaaatgaccct
gcaatcctttcaaagttggcagatttatatgaccaggagggcgataaatcccaagcattc
caatgtcactatgatagttatcgatactttccatcaaacttggatactgtagaatggtta
gcatcgtattatttggaaactcaattttcggaaaagtccatcagctactttgagaaagcg
gctctcatgcaaccaaacgtatcaaaatggcaaatgctcattgccacctgtctacgaaga
actggaaactatcagcgcgcatttgacctttatcgtcaaattcatagaaaattcccacac
gatctggagtgtctcaaattcctcgtcagaatcgctggagatcttggcatgactgaatat
aaggaatataaggataaattggaaaaagccgaaaaaatcaatcagctgcgccttcaaaga
gaaagtgattcgagtcaagggaaacgacactcggcgaattctacacactcccttcctcca
tctgggctcactgggctcggctccggctcaggaggctctagtggtggagcacgacaatat
agtgctcatattcctctactggataacaccgcttcattttcagtgtctcaacgggacatg
agagaaaacgacttctcatacgatgatcctatcggtatgacaaaccgcccaaaaactgga
tctcgaaaaactgtcactgaacttagtcctgacgattttgcagagttcgacgaaagtctt
ttaccagattaa

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