Caenorhabditis briggsae (nematode): CBG_05704
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Entry
CBG_05704 CDS
T01054
Symbol
Cbr-lip-1
Name
(RefSeq) Protein CBR-LIP-1
KO
K04459
dual specificity MAP kinase phosphatase [EC:
3.1.3.16
3.1.3.48
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04148
Efferocytosis
cbr04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
CBG_05704 (Cbr-lip-1)
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
CBG_05704 (Cbr-lip-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbr01009
]
CBG_05704 (Cbr-lip-1)
Enzymes [BR:
cbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
CBG_05704 (Cbr-lip-1)
3.1.3.48 protein-tyrosine-phosphatase
CBG_05704 (Cbr-lip-1)
Protein phosphatases and associated proteins [BR:
cbr01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
MAPK phosphatases
CBG_05704 (Cbr-lip-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSPc
Tc-R-P
Y_phosphatase
PTPlike_phytase
PTP-SAK
Init_tRNA_PT
Motif
Other DBs
NCBI-GeneID:
8575027
NCBI-ProteinID:
XP_002633030
WormBase:
CBG05704
LinkDB
All DBs
Position
IV:complement(8335509..8336960)
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AA seq
376 aa
AA seq
DB search
MTTHLPSTSQNGDEISAEQFNRIFHERSVIVLDCRSNGDSVKKANRLRLPALLQRRLMGG
SMRLATVPDLKELNNPPDQCPEVLLIPGDTEQDEQLSTALARNLKSNDYRHFVLGESVNS
LLSQFPSLRDMADENWNTTFQMNSMPGQGVGQQQVSGGPLLNLNQLRLEGEDQGGKQRAE
FPVKLTSFLYLGNAETAKNRDILNKHSISHVINVTSNLPNTFEDDPNMRYLRISADDNAS
HNLFFPEAISFIEDARRNGSACLVHCLAGISRSVTICLAYLMKTEMCTLDSAYEWVQKRN
ASIAPNFHFMGQLTDYEKMLGLNSNRVGTYPSSAPRSPSCAIEAATASQVGGLLTPPPTS
CSASPQSSNHSAKSFH
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacatttacctagcacatcccagaatggcgacgagatatctgctgagcaattc
aacaggatattccacgagcgtagcgtcatcgtgttggattgcagatcgaatggagattcc
gtgaagaaagccaatcgtctacgcctgccagctctccttcaacgtcgtctaatgggaggc
tccatgcggctcgcaacagtacccgatctaaaggaattaaataatcctcctgatcagtgt
cctgaagtacttctcatacccggtgataccgagcaagatgagcagttatcgacggcgttg
gctcgaaatctgaagtccaacgattaccgtcatttcgtgctgggcgagtccgtcaactcg
ctcctctcgcagttcccttcccttcgcgatatggcagatgagaattggaacactacgttt
caaatgaattcaatgcctggacaaggagtgggtcaacaacaagtatcagggggaccgcta
ctcaatttaaatcaacttcgattagaaggcgaagatcaaggtgggaaacaacgagctgag
ttcccagtgaagttaaccagtttcctctatcttggtaacgctgagacagctaaaaatcga
gatattcttaataagcactctatatcgcacgtcataaatgtcacatcaaatcttccgaat
acgtttgaagacgatccaaatatgagatatttgagaatatcagccgatgacaatgcttcg
cacaacttattcttcccagaagccatatcatttatagaagacgctcgccgtaatggttcg
gcttgtcttgtacattgtctagctggaatttcaagaagtgtaacgatatgcctggcatat
cttatgaaaacagagatgtgtaccctcgactcagcatacgaatgggtccaaaaaagaaat
gccagtattgcaccgaacttccatttcatgggacagctcaccgactatgagaagatgttg
ggattgaatagcaatcgagttgggacatatccctcttctgctcctcgctctccatcgtgc
gccatcgaagcagcgacagcttctcaagtcggaggtctcctaacaccgccaccaaccagt
tgctcggcttctccacaatcgagtaatcactcagccaagtcatttcactag
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