Caenorhabditis briggsae (nematode): CBG_06769
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Entry
CBG_06769 CDS
T01054
Symbol
Cbr-ncx-2
Name
(RefSeq) Protein CBR-NCX-2
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
CBG_06769 (Cbr-ncx-2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbr02000
]
CBG_06769 (Cbr-ncx-2)
00536 Glycosaminoglycan binding proteins [BR:
cbr00536
]
CBG_06769 (Cbr-ncx-2)
Transporters [BR:
cbr02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
CBG_06769 (Cbr-ncx-2)
Glycosaminoglycan binding proteins [BR:
cbr00536
]
Heparan sulfate / Heparin
Others
CBG_06769 (Cbr-ncx-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex
Na_Ca_ex_C
BaxI_1
Ribosomal_S30AE
Motif
Other DBs
NCBI-GeneID:
8589659
NCBI-ProteinID:
XP_045093306
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All DBs
Position
V:complement(7624053..7629021)
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AA seq
979 aa
AA seq
DB search
MTRLGCWLAVAALVALAGLADAGSNCSAADATRNCIDGLVVPIWRPFLDLTTGDRVLRGV
LYFFVIAYMFLGISIVADRFMSSIEVITSMERTIVVKRPGLDPMEVQVRIWNDTVSNLTL
MALGSSAPEILLSIIEVIARGFEAGDLGPNTIVGSAAFNLFMIIAICVVVIPKGEIRRQK
HLDVFCVTATWSIFAYVWLYLILAFFSPGEIEIWEGLLTFVFFPLTVGTAYMADIKIIQN
RFLPHRYRRGSHGQMIATEAEEMKMLENGSPQGADPALKAFEEHRQEFIELMREIRKQNP
HITPTELQKQAEYEMISRGPKSRAFYRVQATRRLIGGGDIVKKRIDKEHNKALDALVQAQ
EKQLRDNTCKIFLDPAHYTVLESVGSFDVVVGRDGGPDGLTVMVDYFTEDGTANAGSDYI
PVKGTLTFYPEDKHQKVTIEVVDDDVFEEDEHFYLRLTNLRVRTKDGIIIDPTRIGGLPV
AQLEMPNTATIMILDDDHAGVFGFDHDHFQVVENCGHLSLQMKRHSGARGKVVIPFRTIE
GTAQADKHFEMKEGEIVFEDNQTEATIDIGIIDTEQYERSDYFYIELSPPIWAKKMNDLS
RIQERFQRRMERKRGSSVASESKDSNTETALAPTDKSTRAASVDLLQPCSDPRRSSQSNS
PHLTSRFRNRLGSWIAGMKGGNGDDEVTTALTPSQLEIAEMGKPRLGEFTKCQITIRESK
EFQGIVDRMIKNANTRIMLGTHSWREQFMEALVVSAGDDDDDDEEGDDGEEKEPEEPGCM
DYFMHVLTVPWKLTFATIPPTDYIGGWATFVVAIFMIGVLTAVVGDLASQFGCWVGLKDA
VTAISFVALGTSVPDTFASKVSAVQDKYADNAVGNVTGSNAVNVFLGIGIAWSMAAIYHW
NKGTKFLVDPGNLGFSVLIFCVEALLCIAVLVLRRSKKVGGELGGPTALRWMTSMFFCSL
WLMYLLLSALEAYCIIPGF
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcctagggtgttggctagcagtagccgctctggtggccctcgccggacttgca
gatgctggatccaactgttccgccgccgacgccactagaaactgcatcgatggacttgtt
gtaccaatttggaggccattcttggatctgacgacaggcgaccgagtacttcgtggagta
ctgtacttcttcgtcatcgcctacatgttcttgggtatctcaatcgtcgccgacagattc
atgagctccatcgaagtgatcacatcaatggaacgaacgattgtagtgaaacgaccggga
ctcgacccgatggaagtacaagtgcgcatttggaacgataccgtttccaacttgacactt
atggccctcggttcatctgccccagaaattttgctttctattattgaggttatcgctaga
ggattcgaagctggagaccttggaccaaacaccatcgtcggttcagccgctttcaatcta
ttcatgattatcgccatctgcgttgtcgttattccaaaaggagaaatccgacgtcagaag
catttggatgtattctgcgttaccgccacctggtccatcttcgcctacgtctggctctac
ctgatccttgccttcttctccccaggagagattgagatctgggagggacttctcaccttt
gtcttcttcccattgaccgtcggaactgcctacatggccgacattaagatcatccagaac
agattcttgccacacagataccgcagaggttctcatggacagatgatcgccacagaggct
gaggagatgaagatgttggagaacggatccccacaaggagccgatccagcactcaaggct
ttcgaagagcatagacaagaatttatcgagttgatgagagagatcagaaaacagaatcca
cacattaccccaaccgaactccaaaagcaagccgagtacgaaatgatcagcagaggacca
aagtctcgggctttctaccgtgtccaggctactcgcagactcatcggaggaggagatatt
gtaaagaagagaatcgacaaagagcacaacaaggctcttgatgctttggtacaggcacaa
gagaagcagttgcgtgacaacacttgcaagatcttcttggatccagctcactacactgtt
cttgagagtgtcggatctttcgacgttgttgttggaagagatggaggaccagacggtctc
actgttatggttgactatttcaccgaggatggaactgccaatgccggaagtgactacatt
ccagtcaagggaactttgactttctacccagaagacaaacatcaaaaggtcacaatcgaa
gttgtggatgacgacgttttcgaagaggacgagcacttctaccttcgcctcaccaacctt
cgtgtccgcaccaaggacggaattatcatcgatccaaccagaatcggaggacttccagtt
gcccaactcgagatgccaaacacagccaccatcatgattctcgatgacgatcacgccgga
gtcttcggattcgaccatgatcacttccaagttgttgagaactgcggacacttgtcactc
cagatgaagagacactctggtgcacgtggaaaggtcgtcattccattcagaaccatcgaa
ggaactgctcaagccgacaagcactttgagatgaaggaaggagagatcgttttcgaggat
aaccaaaccgaagccacgatcgacatcggaatcatcgacaccgaacaatacgaacgctcc
gactacttctacatcgagctctccccaccaatctgggccaagaagatgaatgacttgtca
cgcatccaagagcgcttccaacgtcgtatggaacgcaaacgtggatcttcagttgcttca
gaatccaaggactcgaacaccgaaaccgcacttgctcctaccgacaagtcgacgagagcc
gccagtgtcgacttgctgcaaccatgttcggatccacgccgctcgtcacaatccaactca
cctcacctcacaagtcgattcagaaatcgtcttggttcatggatcgctggaatgaaaggc
ggtaacggagatgatgaggtcacaactgccttgactccatcacaacttgaaatcgctgag
atgggaaaaccaagactcggagaattcaccaagtgccaaatcactattagagaatccaag
gaattccagggaatcgtcgaccgcatgatcaagaatgccaacactcgcatcatgctcgga
actcactcatggagagaacaattcatggaggctctcgttgtctccgctggagacgatgat
gatgatgatgaggaaggagatgatggagaggagaaggagccagaggagccaggatgcatg
gactactttatgcacgttcttaccgttccatggaagctcacctttgccaccatcccacca
actgactacatcggaggatgggccacattcgtcgttgccatcttcatgatcggagtgctc
accgctgtcgttggagatcttgcctctcaattcggatgctgggttgggcttaaggatgcc
gtcaccgccatctcttttgtcgctctcggaacctctgtcccagatacattcgcctcaaag
gtgtctgccgtccaagacaagtacgccgataacgccgtcggaaatgtcaccggatccaac
gctgtcaacgtattcttgggtatcggaatcgcctggtcaatggcagccatctaccactgg
aacaagggaaccaagttcttggttgacccaggaaatctcggattctccgtattgatcttc
tgcgttgaagctctgttgtgtattgcagttttggtgttgagaagaagcaagaaggttgga
ggagagttgggaggaccaactgctttgaggtggatgacctcaatgttcttctgctcactc
tggttaatgtatcttctcctctccgctctcgaggcctactgtatcatcccaggcttctaa
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