Caenorhabditis briggsae (nematode): CBG_16483 Help Entry CBG_16483         CDS       T01054                                  Symbol Cbr-let-711 Name (RefSeq) Protein CBR-LET-711   KO K12604   CCR4-NOT transcription complex subunit 1 Organism cbr  Caenorhabditis briggsae (nematode) Pathway cbr03018   RNA degradation Brite KEGG Orthology (KO) [BR:cbr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CBG_16483 (Cbr-let-711)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cbr03019]     CBG_16483 (Cbr-let-711) Messenger RNA biogenesis [BR:cbr03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      CBG_16483 (Cbr-let-711)   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      CBG_16483 (Cbr-let-711) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 ARM_Cnot1 CNOT1_HEAT NOT1_connector RTX Motif Other DBs NCBI-GeneID:  8583812 NCBI-ProteinID:  XP_045095977 WormBase:  CBG16483 LinkDB All DBs Position III:7365231..7377117 Genome browser AA seq 2627 aa AA seqDB search MMFSRSAPTEELKPTNMIRNRDNIERPISKRGVVSLLPKMSLGFVLNSCSCAYIDNLLAH DNVHRVKPHTFIIQRLVVICGRSTPAVANHAANIILSAFSFCQLDAPTKEFLGEEAALGL FHTILEYSTVNQQARTVMEIRGAQRLTAALCDLIEAYEKSMEYSAANKAISHLCKKLAGL YDPPVILPFLNKLVKIRRLREYLQPLFIAHCEYSVLSPESAEVYNHIARGNFTSETLIDI IETFLDKEVKASVVSRNADPTKIVQYLITCSNANNAEIIQALAFMMYSNSRLNPSKEPGA LDMDAQSVDTITTSRLGDPKLTQPVKDAIMDSSREALQRRLEIYGPRILDSVDDFVKELK QAPVQRKMVTNSSIANALLFINQCNYDVTLAKPFDLQQYWPGANFVHGVIRYIKEKQIET DGHDESYDWFPNINWVEVVKELDDPKLYVSRDTFVLFSEIFPIMFKDDPQNFPISFFYSP WKHWDRQLHLYDHMLEYADIWNFSNYFHTKVLTPELNLKTIPDDTPPIVQLWNCQEFSNI LLTLLNTQPQSPHRDFFKIGYTQTGDVCILALILSPTQWTTTRQDLVREYLPDWISKSPN VIPILNMSWNDPAISKHMRQHIIWSLTSIYSSDNTQLAKILDVAHDIKPTGLSELLNQSA KHLPFMVDLACLASKRDYLNLEKWIEDKEKAHGEAMTVALLQYIHKKYQKQQLVAALAPQ GKTTSSSAPSDPLHVLIKFVRKRARKPHRQQYPLLFQVMKENSGRSSSVSSGGHQTVQAG GSQQQYGSGTGHPPSGAVPQQQSQPPLLQQQISQQSLVTSAAPPQPQMHSQQAIPGPIQR PAQFPPQPMFQPQPQAQQHPHMMNQPPPNTSQNSQPGMNLLMNMNQFNANNRDLLKVVQP APPPSSSMSPSSQMMRSLIPPLAQRQNSNPSWNTTPAPPQQRPSGPPTPQQPMDFRGQIP DFVSQGSHQLQRSGSVSGRSATSGVTRTTTNSGFSVGAPIAGSAAAVAAAAQQPGMEDFA SMTFAEDIQEEANSYFEKIYSVNNAMSVDTLIDLLKKFKTGNDRRERHVLACVVKNLFEE YRFFHEYPERELRTTAAVYGGIIREDIISNVQFATAVRKVIESLSADSNTMLWTFGIVAL QHCRSKLCAYPKVCTMIANSENFTKFPQTLKDYVIAGVKGELPPEGGRHTPVGTNPSSAS STPTPASAPTNWGAVARASSTDPKNALPANRTGNVLSYTNVDTLVQATNKDGAEIAQPAE AVVDKISFLFNNLSATNLAQKKDEVLEMIVEHGDGFTRWLAQYIVMKRVSIEQNFQPLYN QFVTAIDNAYLDQCIKRETFRNIRILLRTDKKTTVASNYSDRQLLKNLGSWLGSITIARN KPILLNDLDLKSLLLEAYYKGQAELLFVVPFISKILTACSKTSLFTPTCAWIRSILKVLA ELHNEPDLKINLKFEIEVLCKELNVDLGVLPMDGILKDTEKLVRVPQQLCEVKVLGRPEA ASPVQSQIRLSGSAEQLSGMSPAIPDQQKPATPQPTEAELQAGGGAGSQTEPQVTPNVTH FAYHDINVLTYDGLVPHVKIVANLPLFQLHPHAKHLVRPAMIHAIKELIGPVTERALKIA MTVTESLVRKDFALDPEEQNLKTASFHMMRAMTAGMAMITCRDPLASTMHANLAQAFSSS LRSSNGTPELKQMIEEASSTITQDNVELSTNFIVKTACEKATQEIEKRLEADYQKRINAK TEGGAYRDEAAVAVHSQLPKVIATEPGPTSSALMNIYTQFSSRICGFKANSGEDLLGSEP NSANPPVQTHSKDMDVICQQLQIIIKEVDQTTQAQPHLNNPAFQTVCWIRDWMQQITVSK DANKLMALVSRCTEHLLHAYRLEGQPTKNLLDVEWARRLRDLFIGLMRLLQAYYPLVDLS RRITSAIMQIRSDYKWNLEGIEILFKQNLLQSTLWDQYLADSMDNGGNMEAVCFAQKFVR SIGGGDMSRLQYLKERFPMTCDQLTKLHQLQSATRTDGLNNGINNGSHHHPGIQHQQQQQ QPQVTLPMDAAPMPQASAEAMAQRGYDDQEMTAKVEVIMREWISLCYSPTGQRSPQESLA QMIQLMHEHGVLATDDKITQFFRLCVENCVDISVRVMKSEQIANGLPTNLIRHRCYYTLD AFVKLMALMIRHSDNGQSQNKINLLKKLLNIIVGVLHMDHEVRKTDFNAMPYHRILISLF NEITGPDPLKLLEPIAWSILEAFGQTFFALQPRRMPGFAFAWLDIVGHRNVIGRLLANTG IAETVDSVKTAATYTQLIISHLKFLAPFLRNIQLPKSIAILYKGTLRVLLVILHDFPELL CEFHYVICDTIPPNCVQLRNLILSAFPHEMRLPDPFALNFKQVDTIPEMAVEPKSNLNMA TIIPDNIRVPLDEYLANRTPVDFLPRLPTLLQTPNQSGTKYNTTVMNALVLYVGIRAIEN LHLRRQRISTLSIAHTSFMDIFQNLAIQLDTEGRYLLFNGIANQLRYPNAHTHYFSCVFL YLFKNSTNDTIQEQITRILFERLVALRPHPWGLLITFIELIKNPTYNFWRYEFTSCAPEI QRLFQNVANTCVPAQGSQYAQNQDGSSGMLGNDAGGLNQQQQHPSSN NT seq 7884 nt NT seq  +upstreamnt  +downstreamnt atgatgttttcgcgttcagccccgacagaggagctgaaaccaaccaacatgattcggaat cgggacaatattgagaggcccatatccaagcgaggcgtcgtttctcttctgccgaaaatg tcactgggatttgttctcaatagttgttcgtgtgcttacatcgacaatctactggctcat gacaatgttcatcgtgtgaagccacatacgtttatcattcaacgtcttgtggtcatctgt ggtcgttcgactcctgcagttgccaatcacgcggcgaacatcatactctcagcattcagc ttctgccaattggatgctccaaccaaagaatttcttggagaggaagcagcccttggccta tttcatacgatcctcgagtattctactgtgaaccagcaagctcggacagttatggagatt cgaggagcacaacgactcactgcagctctttgtgatcttattgaggcctatgagaagtct atggaatattctgcggcaaacaaagcgatttctcatctgtgcaaaaagctcgccggatta tacgatcctccggtaattcttccgttcctcaacaaactggtcaagatcagacgtcttcgc gaatacctccagccattattcatagcacattgtgaatactcagtcttgtctccagaaagt gccgaagtctacaatcacattgcacgcggcaacttcacttcggagacactcatagatatc attgaaacgtttctggataaggaggtgaaagcatctgttgtcagcaggaacgccgatccc accaagatagttcaatacctgatcacgtgctccaatgccaataacgcggaaataattcaa gccctggcctttatgatgtattccaattcacggttgaatcctagtaaagaacccggggct ctcgacatggatgcacaatcggtcgacacaataaccacttctcgactcggagatccgaaa ttgacacagcctgtgaaagatgctataatggattctagtcgggaggctcttcagagacgc ttagaaatttatggaccgcgtattttagattctgtagatgacttcgtcaaggaattgaaa caagcacctgtgcaacgaaaaatggtcaccaactcttcaatcgcgaatgctctgcttttt atcaatcaatgcaactatgatgtgacactagcaaagccgttcgacctacaacaatattgg ccaggagcgaatttcgtgcatggtgttattcgatacatcaaagaaaagcaaatcgaaact gatggccatgacgaatcctacgattggtttccaaatattaattgggtcgaagttgtcaaa gaactggatgatccaaagctttatgtcagtcgggatactttcgttcttttttccgagatc tttccaatcatgttcaaagacgatcctcaaaatttcccgatttccttcttttattcgcca tggaaacattgggatcggcagcttcatttatacgaccacatgttggagtatgccgatatt tggaacttctcaaactattttcacactaaagtgctgactccagaactaaatttaaaaacg attcctgatgacacaccacctattgttcagttgtggaattgtcaagagttcagtaatatt ctactcacattgctcaacacccaacctcaatctcctcatcgagatttctttaaaattgga tacacccaaactggggatgtttgcattttggctttgatactctcacctacacaatggact acaacacggcaggatttagttcgcgagtatctacctgactggatctccaaaagcccaaat gtgatccccattttgaatatgtcatggaacgacccagccatatccaaacatatgcgtcaa cacatcatctggtcactaacaagtatatacagttccgataacacgcagcttgccaaaatt ctcgatgttgctcatgatatcaagccaaccggtctctctgaacttttaaatcagtctgct aagcatcttccttttatggtggatctagcatgtctcgcttcgaaacgagactatttgaat ttggagaagtggatagaggataaggaaaaggctcatggagaagcgatgaccgttgcactg ctacagtatattcacaagaaatatcaaaagcaacaattggtagcagcactagcacctcaa ggcaaaacaacaagctcaagcgctccatctgatcctcttcacgtgcttatcaaatttgtt cgaaaaagagcaagaaagcctcatcggcagcaatatccattacttttccaggtaatgaaa gagaactcgggtagaagttcgtcggtatcatcgggcggacatcaaacagtacaggcagga ggttcacaacaacagtacggcagcggcaccggacatccaccatccggcgccgttcctcag cagcaatcacaaccacctctcctgcagcaacaaatttcgcagcagtcacttgtgacgtca gcagctccgccacagccgcagatgcacagtcagcaagcgattccaggtccgatacaaaga ccggcgcagtttcccccacaacccatgtttcaaccacaacctcaagctcaacagcatcca catatgatgaatcaaccgccaccaaacacatcgcagaattctcagccaggaatgaatctt ctcatgaacatgaatcagtttaacgcgaacaatcgtgatttgctgaaagttgttcagcct gcgcctcctccatcttcttcgatgtccccttcttcgcaaatgatgcgatctttaattcct ccgctcgcacaacggcagaattctaatcccagctggaataccactccagctccgccgcaa cagcgaccatctggacctccgacgccacaacaaccaatggatttccgagggcaaattcct gatttcgtttcacaaggatctcaccagttgcaaaggagcggaagtgtcagtggtagaagc gcgacgagtggagtgacgagaacgacgacaaatagcggattttctgttggtgctccgata gcaggaagtgcagctgctgtggccgctgcggctcaacaaccaggcatggaagactttgca tcaatgacattcgccgaagacattcaggaagaagccaattcgtacttcgagaaaatttac agtgttaacaacgcaatgtccgtggatacattaatcgatttactgaaaaagttcaagact ggcaatgatcgtcgcgaacgccatgttctcgcatgtgtggtcaaaaacttgttcgaagaa tatcgtttcttccatgaatatccagaaagagagctgcgaaccacggctgctgtttatgga ggaattattcgggaagatattatcagcaacgttcagtttgccacagccgttcggaaggtt attgagagtttgagtgcagattcgaatacgatgctctggacgtttggaatagtcgcactt caacattgcagaagcaaactgtgtgcttatccgaaggtttgcactatgatagccaacagc gagaacttcactaaattcccccagacgttgaaagattatgttattgccggtgtcaaagga gagctcccaccagaaggtggtcgtcacactcccgttggtacaaatccttcgtcggcttca tccacaccaacaccagcatctgctccgacaaattggggagctgttgcacgagcatcctcg accgatccaaaaaatgctcttcctgcgaatcgaactggcaacgttctttcatacaccaat gtggatactcttgtccaggcaacaaataaggatggagcggagatcgctcagcccgctgaa gctgtagtggacaaaatctcgtttttattcaataatttgtctgcaaccaatttggctcag aagaaagatgaagtgttggagatgattgttgaacatggagatggtttcacacgttggttg gctcaatatatcgtcatgaagagagtctctatcgaacaaaattttcaaccactctataat cagtttgtcacagccatcgacaatgcataccttgaccaatgcatcaagagagaaacattc agaaacattcgtatccttcttcggaccgataagaaaacgactgttgcttctaactacagt gatcggcagttgctgaaaaatctcggaagttggcttggatcgatcactattgcgaggaac aaacctattttgctcaatgatctggatttgaagagtttgttactggaggcttactacaaa ggacaagcagagttactatttgtggttccgtttatatcgaaaattctgacagcgtgctca aaaacatcgttgttcactccaacttgtgcttggattcgaagtattctaaaagttctggcc gaactgcataatgaacctgatctcaaaataaatttgaagttcgaaatcgaagtattgtgc aaagaattgaatgttgatcttggtgtcttgccaatggatggtattctcaaggatacggag aagctcgtgcgagttccacaacagctttgtgaagtgaaagtgctcggacgaccagaagcg gcgagcccagtgcaatcgcaaattcgtttgtcgggttcagctgaacagctttccggaatg tcccctgctatccctgatcagcaaaaacctgctacaccacaaccaacagaagctgagcta caagcaggaggtggagctggatcacaaacggagccgcaagtaactccaaacgtcactcat ttcgcctatcacgacataaatgtgctcacatacgacggtctcgtgccacacgtcaagatt gttgcaaatcttcctctcttccaattgcacccgcatgcaaaacacttggtccgcccagct atgatccatgccatcaaagagttgatcggaccagtcaccgaaagagctttgaagatcgcg atgacggttacagagtcgttggttcgaaaggatttcgctttagatcccgaagagcagaat ttgaaaaccgcttcattccatatgatgcgtgcaatgacagctggaatggcaatgatcaca tgtcgtgacccgctggcgagtacaatgcatgctaacttggctcaagcgttctcgtcatca ctgcgttcatccaacgggactccagaattgaaacaaatgatcgaagaagcatcatctacg ataacgcaagataacgttgaactttccaccaacttcattgtcaaaacggcttgtgagaag gcaactcaggaaattgagaagcgtctggaagccgattaccagaagagaattaatgcaaag actgaaggaggagcgtatcgagatgaggcagctgttgctgttcattcccaactaccgaaa gttattgccactgaaccaggaccgaccagttctgctttgatgaatatttacacccaattc agcagccggatttgtggtttcaaagcgaattctggcgaagatcttctcggctcggaacca aatagcgctaaccctccagttcaaactcacagcaaagatatggatgttatctgccaacaa ttgcaaattatcattaaggaagtggatcaaaccactcaagctcaaccgcaccttaacaat cccgcgtttcaaacagtatgctggattcgcgactggatgcaacagattactgtttcgaag gatgcaaacaagttaatggctcttgtttcgcgatgcacagagcacctgttgcatgcgtac cgtcttgagggacagccaactaagaacttgttggatgtggaatgggctcgacgccttcgt gatcttttcatagggctgatgcgtcttctacaagcatactatcctttggtcgatctttct cgacgcattacgtcagcgataatgcaaattcgttcggattataagtggaacttggaggga attgaaatacttttcaaacaaaacttacttcagtctacactttgggatcagtacctcgcc gacagcatggacaatggtggaaatatggaagcagtgtgctttgcccagaaatttgttaga agtattgggggtggtgatatgagccgtctccagtatctgaaagagagattcccgatgact tgcgatcagctaactaagcttcatcaacttcagtcggcaactcgaactgatgggctgaac aacggaattaataatggttctcatcatcaccctggaattcaacatcaacaacaacaacaa cagcctcaagttactctcccaatggacgctgctccaatgccacaagcatctgctgaagcc atggctcaacgaggatatgatgatcaagagatgacagccaaagttgaagtaattatgcga gaatggatcagtttgtgctactcacccactggacagagaagcccacaggagtcacttgct caaatgattcagctcatgcatgagcatggtgttcttgctactgatgacaagataactcag tttttccgactttgtgtggagaactgtgtagacatctcagtacgagttatgaagtcggaa caaatcgcaaacggtttaccaacaaatcttattcgtcaccgctgctactacactctggac gcgtttgtcaaacttatggctttgatgatcagacattcggacaatggacagtcgcagaat aagattaatctgctgaaaaaactactgaacattatcgttggggttcttcacatggatcac gaagttcgcaaaacagatttcaacgcgatgccgtatcatcgaatcctcatcagtttgttc aacgaaattactgggcccgatccactgaagctactggagccaatcgcatggagtattttg gaagcttttggacaaacgttcttcgctcttcagccaaggcgcatgccaggctttgctttc gcttggctcgacattgtcggacacagaaatgttatcggacgtcttttggccaacacaggg attgccgaaacagtggattcagtgaaaacagctgcaacatatactcagttgatcatctct catctcaagttcttggcaccattcctacgaaatattcaattgccgaagtctatcgctatt ctctacaaaggaacgctccgtgttcttcttgttattctacacgatttcccagagcttctg tgcgaattccactacgtcatatgtgatacgattccgccaaactgcgtgcaactgcgcaat ttgattctatctgccttccctcacgaaatgcgtcttccggatccattcgctctgaacttc aaacaagtagatacaatcccagaaatggctgttgaaccaaaatcgaacttgaacatggcc accataatccctgataacattcgagttccattggatgaatatctggcgaatcgaacacct gttgacttccttccaagactgccgactctacttcaaactccaaatcaatctggtaccaaa tataacacgacagtcatgaatgctcttgttctgtacgtcggcattcgtgctattgaaaac ctgcatttgagacgtcagcgcatttctacattgagtatagctcatacatcgttcatggat attttccagaatttggctattcaattggacactgaaggaagatacttgctgttcaacgga atcgctaatcaacttcgttacccgaacgctcacactcactacttcagctgcgtcttcttg tatcttttcaaaaactcgactaacgacaccattcaagagcaaatcacgcgtatactgttc gaacgcctcgttgcacttcgtcctcatccttggggtcttctgataacattcatcgagctg atcaagaacccaacatacaacttctggcgttacgaatttactagctgtgctccagaaatt caaagattattccaaaatgtggccaatacgtgtgtcccagctcaaggatctcaatatgca caaaatcaagatggatcatctggaatgctcggtaacgatgccggaggacttaaccaacag cagcagcacccgtcatccaattga

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