Caenorhabditis briggsae (nematode): CBG_17356
Help
Entry
CBG_17356 CDS
T01054
Symbol
Cbr-pgp-4
Name
(RefSeq) Protein CBR-PGP-4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CBG_17356 (Cbr-pgp-4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbr02000
]
CBG_17356 (Cbr-pgp-4)
04147 Exosome [BR:
cbr04147
]
CBG_17356 (Cbr-pgp-4)
04090 CD molecules [BR:
cbr04090
]
CBG_17356 (Cbr-pgp-4)
Enzymes [BR:
cbr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
CBG_17356 (Cbr-pgp-4)
Transporters [BR:
cbr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
CBG_17356 (Cbr-pgp-4)
Exosome [BR:
cbr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CBG_17356 (Cbr-pgp-4)
CD molecules [BR:
cbr04090
]
Proteins
CBG_17356 (Cbr-pgp-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
RsgA_GTPase
AAA_29
Rad17
SbcC_Walker_B
AAA_5
AAA_30
DUF815
AAA_28
Zeta_toxin
AAA_24
AAA_21
EMG1
Motif
Other DBs
NCBI-GeneID:
8585971
NCBI-ProteinID:
XP_045096174
LinkDB
All DBs
Position
X:complement(5210272..5222046)
Genome browser
AA seq
1402 aa
AA seq
DB search
MVLSVKGDEPVEDGMKIATDHVELGHDPKRKIKKSKSSGGNSLSNLVSSFFKICYKAFFF
QFRHSDCLDYLLLLGGIVFSSASGALLPFNSLIFEGITNVLMQGQSEWQNGTFAYDTFST
GIRHYCLLYFLLGLLLKLCSQKFQIFQNACLYTMAERRLYCIRKHLLRSVLRQDAQWFDE
NTVGGLTQKMSSGIEKIKDGIGDKIGVLFSGAATFISGVLLGFYMCWQLTLVMLITVPLQ
LGQMYMSAKHLNRATKNEMSAYSSAGGMANEVIAGIRTVIAFNAQPFEISRYADKLAEAR
QMGIRKSIVLASCSAVPLVLMFVLMAGAFWYGAILTSFGIATSGTTFGVFWAVLLGTRRL
GEAAPHMGAILGARLAINDIFKVIDNEPEINCTKETGRRPEKINGKLNFDNIEFTYPTRP
DVKILKGVSFEVNPGETVALVGHSGCGKSTSIGLLMRFYNQCAGTIKLDGVPIEDYNIQW
LRSTIGIVQQEPIIFLATVSENIRMGDNSITDKDIEDACRQANAHDFIGHLSDGYNTIIG
AGAVQLSGGQKQRVAIARAIVRKPQILLLDEATSALDTESERMVQAALDKASQGRTTLCI
AHRLSTIRNANKILVFDQGLIVEKGTHDQLIRQNGIYASMVRAQEIERAKEDTVVEGIYH
RFVFKKNIMIFLDDSLEEETQSISRRLSTSEDEVRKSKSLLRDSARLSQSMLSVTSQVPD
WEVEIAREEMFEEGAMEASMMDIFRFAKPEKWNVIIALIVTLIRGITWPAFSVVYGQLFK
VFAEGGEDLPTNAFVSSLWFILLAFTSGITTFISGSLLGKTGETMSSRLRLNVFKNIMQQ
DASYFDEPKHNVGNLTARLATDSQNVQAAIDHRLAEVLNGVISLFAGIAVAFWFGWSMAP
IGLLTALLLVIAQSSVAQYLKYRGPKDMESAIEASRIVTESISNWKTVQALTKQEYMYGA
FTTASKKPRQRAFAKGLWQSLSFALAGSFFLWNFAIAYMFGLWLISNNWTTPFAVFQVIE
ALNMASMSVMMAASYFPEYVRARISAGIMFTMIRQKSAIDNRGLTGETPLIKGDISMRGV
YFAYPNRKRQLILNNFNMSANFGQTVALVGPSGCGKSTTIQLIERYYDAVCGSVRIDDTD
VRDISVKHLRDNIALVGQEPTLFNLSIRENITYGLENVSQEQIEEAAKLANIHNFVISLP
EGYDTSVGASGGRLSGGQKQRIAIARAIVRDPKILLLDEATSALDSESEKIVQEALDKAR
LGRTCVVIAHRLSTIQNADKIIVCRNGKAIEEGTHQSLLARRGLYYRLLINAKKEHLIFL
TPEFKFPKEYARYEGKAWQLWWSLGFHKSFCGGLQEAVHSFHTLSASFPPPLHPYCLRRA
LLAFFFPAPFSASLSPKLEPSN
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggttttatccgttaaaggagacgagcctgtggaagacgggatgaagatcgcgacggat
catgtggaattgggtcatgacccaaagagaaagatcaagaaatcaaaatcttcaggagga
aacagtttgtccaacttggtaagttcattcttcaaaatttgctataaagcgttttttttt
cagttccgtcactctgattgccttgattatcttcttcttctcggaggaattgtgttcagt
tctgccagtggagcacttctcccattcaacagtcttattttcgaaggaatcaccaatgtc
ttgatgcaaggacaatccgaatggcagaacggaacatttgcttatgacacattcagcacc
ggaatccgtcactactgtcttctctatttcttgcttggactcctcctaaaactttgttcc
caaaaattccaaatttttcagaacgcttgcctctacaccatggctgagcgacgtctctac
tgcattagaaaacacttgctaagatccgtcctccgtcaagatgcacaatggtttgatgag
aatacggttggagggttgacccaaaaaatgagcagtggaatcgagaagatcaaagatgga
attggagataagattggagttttgttctcgggagctgcgacgtttattagtggagtcttg
ttgggattctatatgtgctggcaattgactctggtgatgttaattacggtaccgctgcaa
ttgggacaaatgtacatgtcggccaagcatctcaaccgcgccacaaagaacgaaatgtcc
gcgtactccagcgctggtggaatggccaacgaagtgatcgctggtatccgaactgttatt
gctttcaacgctcagccatttgagatctccagatacgctgataaattagctgaagctcga
caaatgggaatccggaagtcgatcgttcttgcgtcttgcagtgccgtccctcttgttttg
atgtttgtgctgatggctggagccttctggtacggcgcgattctcacttcctttggaatc
gcaacttcaggaaccactttcggagtgttttgggcggttctcttgggaactagacgtttg
ggagaggctgctcctcacatgggagccatcctaggagccagacttgcaatcaatgacatt
ttcaaagttattgataacgaaccagagatcaattgtactaaggagaccggaagacgaccg
gaaaagattaatggaaaactcaactttgataatattgagtttacctacccaactagacca
gatgttaagattttgaaaggagtctcatttgaagtgaatccaggagagactgttgcattg
gttgggcactctggatgtggaaagtctactagcatcggtctcttgatgaggttctataat
cagtgtgcgggaacgatcaaacttgatggtgtcccaattgaggactacaacattcaatgg
cttcgaagcacgattggaatcgtccaacaagaaccaatcatctttttggctactgtatca
gaaaacatcagaatgggtgacaactctattaccgataaggatattgaggatgcgtgtcgt
caagctaacgctcatgacttcatcggacatcttagtgacggctacaacactataatcggc
gcaggagcagtccagctctctggtggtcagaagcaaagagtcgctattgccagagccatt
gtccggaaaccccaaatccttctccttgatgaagcaaccagtgcattagataccgaaagc
gagagaatggttcaagcagctctggataaggcctcgcaaggaagaactacattgtgcatt
gctcatcgattgagtaccatcagaaacgccaacaagattttggtatttgatcaaggactg
attgttgagaaaggaactcatgatcaattaatccgtcaaaatggaatctatgccagtatg
gtgagagcccaggagattgagagagcaaaagaggatacagttgtagagggtatttatcat
agatttgtgtttaaaaaaaacataatgatatttttagatgactcccttgaagaagaaaca
caatcaatttcccgccggttatctacctctgaggatgaggttcgcaagagcaagagtctt
cttcgagactcggcacgtctcagccaaagtatgctcagtgtcacttctcaagtgccagat
tgggaagtggagattgctcgtgaggagatgtttgaggagggagcaatggaggcatcgatg
atggacatcttcagatttgccaaaccagagaaatggaatgttataattgcattgatcgtt
acgttaatccgtggaattacatggccagcattctctgtagtttatggtcaacttttcaaa
gtgttcgccgaaggaggtgaagatttaccaaccaacgcttttgtcagctcattatggttt
attttgcttgcatttacttctggaatcaccacttttatttctgggagtcttcttggaaaa
actggagaaaccatgtcgagccgtcttagattgaatgtcttcaaaaatatcatgcaacag
gatgccagttattttgacgagccgaagcataacgtcggaaacttgacagctcgcctggca
acagattcacaaaatgttcaagctgctattgatcatcggctcgccgaagtgctcaatggt
gtgatctccttgtttgccggtattgcggttgcgttttggttcggatggagtatggcacca
attggtcttctcacggctctccttctagtcattgctcaaagctctgtggctcaatatttg
aagtatcgaggaccaaaagatatggaatcagctattgaagctagtagaattgtcaccgaa
tcaatctctaactggaaaaccgttcaagctctcaccaagcaagaatacatgtatggcgct
ttcacaaccgcatccaagaagccacgtcaacgagcatttgccaaaggcctctggcaatca
ctatctttcgcgttggctggaagtttcttcctctggaatttcgctatcgcttatatgttt
ggtttatggctcatctctaataactggacaactccatttgccgtttttcaagttattgaa
gcattaaacatggcatcaatgagtgtgatgatggcagcatcctacttcccagaatatgtc
agagctagaatttcagctggtatcatgttcacaatgatccggcaaaaatcggctattgac
aatcgtggactcactggagaaacaccgctcatcaaaggagatatcagcatgcgtggagtc
tactttgcctatccgaaccgaaaacgtcaactgatcctcaacaacttcaatatgtcagcc
aactttggtcaaactgtggcacttgtgggaccatcgggatgtggaaagagtacaactatt
caactcatcgagagatactatgatgccgtttgtggatctgtgagaattgatgacaccgat
gtccgtgatatttctgtcaaacaccttcgtgataatattgctcttgtggggcaagagcca
actcttttcaacttgtccatccgagaaaatattacttatggactcgagaacgtctcccaa
gaacaaatcgaagaagctgccaagcttgctaacatccacaactttgtcatcagcctcccg
gaaggatatgatacttccgttggtgcttctggcggacgattatctggaggtcaaaagcaa
cgcattgcaattgcaagagcaattgtcagagaccccaagatcctcttgctagacgaagca
acgtctgccctagattcagaaagcgagaaaattgtacaggaagcgctggataaggctcgc
ctcggcagaacgtgtgtggtcatcgctcatcgtctttcaacaattcaaaatgccgacaag
attattgtttgtcgaaacggaaaggcgattgaggaaggaacccatcaaagtctgctggct
cgacgtggattatactatcgtttgttaataaatgcaaaaaaggaacaccttattttttta
actcccgagttcaagttcccaaaagaatatgctcgttatgaggggaaggcttggcaactc
tggtggtcattaggcttccataaaagtttctgtggtggactccaggaggctgtccactcc
ttccacaccctctctgcttctttcccgcctcctcttcatccgtattgtcttcgtcgcgca
ctactagccttcttcttccccgccccattctctgcgtcgttgtcgccaaaacttgagccg
tctaactga
DBGET
integrated database retrieval system
