Caenorhabditis briggsae (nematode): CBG_17505
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Entry
CBG_17505 CDS
T01054
Symbol
Cbr-apt-9
Name
(RefSeq) Protein CBR-APT-9
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
CBG_17505 (Cbr-apt-9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_17505 (Cbr-apt-9)
Membrane trafficking [BR:
cbr04131
]
Endosome - Golgi transport
Others
GGA
CBG_17505 (Cbr-apt-9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
GGA_N-GAT
GAT
CCDC39
DUF489
Motif
Other DBs
NCBI-GeneID:
8586036
NCBI-ProteinID:
XP_002644043
WormBase:
CBG17505
UniProt:
A8XRC2
A0AAE8ZVM1
LinkDB
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Position
X:complement(5705259..5708826)
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AA seq
590 aa
AA seq
DB search
MTEQVVEPTRAIDYWVCKATDRFVTEDERIKALDFIIESIHKEPASALLAVDLFSHKLSS
PCQEEAMLTIHALDYLVRNGGEKVHERCGRYKFLNELVRLIAPKYNGKFTSDALKTEIIK
LLFIWQLSIKHIEKYKQVYESLKASKIITEDPQVKETEVPVFAIPPARASVFANEEQAIL
LKSLLNSNRPEDLQTANNLIKSLVESEEHKVLKIHERRKTLDHAVHLCQQMEHLKLDKAA
ETIGLGSFTPDAERTLQRLTDELDQLQTKIYAYANELAENNDPCLEEVLNINDHINKALP
ERDLPRGGNRAPAAERVHLEPENQELLVFNSPTSKTGPRNGFCDPRDLEGSLLNNMIESE
FVEEPKIIPVQQMTPVSNRNSSSSPRASGDSIFETDFLAGKRLPEAPKPPTLNELKPNTT
TITLDALEVLVPPLSPEPTSLSPKVIPEKVFMNPSSIIMRNRLPVQILDSKGVRILLYYC
QSDMTVSNIHSYVIVIQNHNNFVMKNVQLSMTTNDKNVIIRLQDAVSELPGFNIFGQQVT
SNLLLCIQQLNDVKEVELDFSLAYRKTMESAISGSFTLTLVPEHVFNLNF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcaagtggtcgaaccgacgcgtgccatcgactactgggtttgcaaagccaca
gacagattcgtgactgaggatgagagaataaaagcgcttgatttcatcattgagagtatt
cataaggaaccagccagtgctcttctagccgtcgacttgttttcgcacaaactatcgagc
ccttgccaagaggaagcgatgcttacgatccatgctctcgactatttggtgcgaaatggt
ggagagaaggttcatgagcgatgtggtcgttacaaattcctaaacgagcttgtcagactg
attgctcccaaatacaatgggaaatttacaagtgacgcgctgaaaacggaaataatcaaa
ttgttgttcatctggcagctatccattaagcacatagagaagtacaagcaggtttatgag
tcattgaaagccagcaagattatcaccgaggatccgcaggtgaaagagaccgaagttcca
gtgtttgccattccacctgcacgtgcgtcagtgtttgctaatgaggagcaagcaattttg
ttgaagtctttgttgaacagcaaccgtccagaggatctacagacagcgaacaatctgatc
aaaagtctcgtggagagtgaagaacacaaagtgctcaaaatccatgagcgacgaaagact
ctcgatcacgcagtccacttgtgccagcaaatggagcacttgaaacttgacaaggccgcc
gagacgattggattaggcagttttacacctgatgctgaacgtactcttcagagactcact
gacgagctcgatcaacttcaaacaaaaatttacgcgtatgccaacgagcttgccgagaac
aatgatccttgcctggaagaagttttaaatattaacgaccacatcaacaaggcacttcca
gagagggaccttccaaggggtggcaatcgagccccggcagcagaaagagtccatttggag
ccggaaaaccaagaattgctagtcttcaactcgccaaccagtaagacgggaccgaggaac
ggattttgtgatccacgtgatttggaagggagtcttctcaacaacatgattgagtcagag
tttgtggaggagccaaagatcattcccgttcaacaaatgactccagtctcaaatcgcaat
agctcgtcgagcccccgtgctagtggggactcgattttcgagactgattttctggctggg
aaacgattgccagaagctccaaaacctccaactctcaatgagctaaaaccaaacaccacg
actatcactctagatgcattggaagttttggtcccaccattgtcaccggagccaactagt
ttgtcgccaaaagtaattccggagaaggtgttcatgaatcccagttccattatcatgaga
aaccgtctcccagtccagatcttggatagcaaaggtgtccgaatccttctctactactgc
caatccgacatgactgttagcaacatccactcctatgtgatagtgatccaaaaccataat
aactttgtcatgaagaatgtgcaattgagcatgactactaatgacaagaacgtcatcatt
cgcttgcaagacgctgtcagcgagctgcctggcttcaacatcttcggacagcaagtcacc
agcaaccttctcctctgcattcaacaactcaacgacgtgaaagaagtcgaactcgatttt
tctcttgcatatagaaagacgatggagtcggcgataagcggaagtttcacactgacactt
gtcccggagcacgttttcaatctcaacttttga
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