Caenorhabditis briggsae (nematode): CBG_23018
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Entry
CBG_23018 CDS
T01054
Symbol
Cbr-rfc-2
Name
(RefSeq) Protein CBR-RFC-2
KO
K10755
replication factor C subunit 2/4
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03030
DNA replication
cbr03410
Base excision repair
cbr03420
Nucleotide excision repair
cbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBG_23018 (Cbr-rfc-2)
03410 Base excision repair
CBG_23018 (Cbr-rfc-2)
03420 Nucleotide excision repair
CBG_23018 (Cbr-rfc-2)
03430 Mismatch repair
CBG_23018 (Cbr-rfc-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbr03032
]
CBG_23018 (Cbr-rfc-2)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_23018 (Cbr-rfc-2)
03400 DNA repair and recombination proteins [BR:
cbr03400
]
CBG_23018 (Cbr-rfc-2)
DNA replication proteins [BR:
cbr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CBG_23018 (Cbr-rfc-2)
DNA Replication Termination Factors
ELG1-RFC complex
CBG_23018 (Cbr-rfc-2)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CBG_23018 (Cbr-rfc-2)
DNA repair and recombination proteins [BR:
cbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CBG_23018 (Cbr-rfc-2)
Check point factors
HRAD17(Rad24)-RFC complex
CBG_23018 (Cbr-rfc-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_14
AAA_22
nSTAND_NTPase5
Viral_helicase1
RuvB_N
AAA_16
Mg_chelatase
AAA_18
AAA_assoc_2
AAA_lid_RFC1
RCF1-5-like_lid
AAA_28
RNA_helicase
nSTAND3
AAA_11
AAA_19
AAA_33
NTPase_1
AAA_5
bpMoxR
AAA_25
MeaB
ABC_tran
NPHP3_N
AAA_2
IstB_IS21
AAA_30
DUF815
TsaE
AAA_3
IcmW
AAA_24
ATPase_2
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
8585088
NCBI-ProteinID:
XP_002643094
WormBase:
CBG23018
UniProt:
A0AAE9DG37
LinkDB
All DBs
Position
III:13607728..13611886
Genome browser
AA seq
329 aa
AA seq
DB search
MSKAQKNELAPWVEKYRPQILADIVGNENIVERLKVIAKEGNVPNIILSGPPGCGKTTSV
WALARELLGDKVKDAVLELNASDERGIDVVRNRIKTFAQTRVTLPEGRHKIIILDEADSM
TEGAQQALRRTMEIYSKTTRFALACNQSEKIIEPIQSRCALLRYTKLTAAELMSRVVEVA
KAEDVNHDDGGLEAILFTAQGDMRQALNNLQATVNAYEQVNKENVLKVCDEPHPDLMIKM
LAYCVDGKFFEASKIVHEFHRLGFSSDDIVSTLFRVVKTVELSKRVNEQLRQEFIREIAM
CHMRIIQGLSSKLQLSRLVADLCRVSASV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagcgcaaaaaaacgagctagcgccatgggtcgagaaataccggccacaaatt
cttgccgacatcgtgggcaacgaaaatattgtggagcggctgaaagtgatcgccaaagag
ggaaatgtgccgaatatcattttatctggaccgcccggatgcggaaaaacgacatcggtg
tgggcgctggccagagagctgcttggcgacaaggtcaaagacgctgtactcgaattgaac
gcttctgatgagagaggaatcgatgtggtccgaaatcgaatcaaaacgttcgcccagaca
agagtgacacttccagaaggacgccacaaaatcatcatccttgatgaggcggattcgatg
accgagggcgctcagcaggctcttcgtcgcaccatggagatttactcgaagacgacgaga
ttcgcgttggcgtgtaatcaatcggagaagattattgaacccatccaatcccgatgcgct
cttctccgctatacaaagctgactgcggccgagctgatgtcacgtgtcgtcgaagtggcc
aaagcagaagacgtcaaccatgacgacggtggtctcgaagcgattctgttcacggctcag
ggcgatatgagacaggcgttgaacaatcttcaggcaacggtgaacgcctacgaacaggtg
aacaaggagaacgtgctgaaagtgtgcgatgagccgcacccggacctaatgatcaaaatg
ttggcctactgtgtggatgggaagtttttcgaggcgtcgaaaattgttcacgaattccat
cggctgggattctcgtccgacgacattgtgtccactttgtttcgagttgtgaagacggtg
gagctgtcgaaacgagtcaacgagcagttgagacaggagttcattcgggaaatcgccatg
tgccatatgagaatcatccaaggactctcctcaaaactccaactctcccgcctcgtcgcc
gatttgtgtcgtgtttcggccagtgtctaa
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